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Hyunggyu Park 박 형 규

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Hyunggyu Park 박 형 규. Starting … Active …. Hyunggyu Park 박 형 규. Starting … Active …. Hyunggyu Park 박 형 규. Active systems. - PowerPoint PPT Presentation

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Page 1: Hyunggyu Park     박 형   규

Hyunggyu Park 박 형 규

Starting … Active …

Page 2: Hyunggyu Park     박 형   규

Hyunggyu Park 박 형 규

Starting … Active …

Page 3: Hyunggyu Park     박 형   규

whose dynamics are manifested over a broad spec-trum of length and time scales, are driven systems. Because active systems are maintained in non-equi-librium steady states without relaxing to equilibrium, conventional approaches based on equilibrium statis-tical thermodynamics are inadequate to describe the dynamics.

Active systems

Hyunggyu Park 박 형 규

Nonequilibrium Thermodynamics far from EQ Fluctuation Theorems Breakdown of Fluctuation Dissipation Theorems

Active matter Assemblage of self-propelled particles, which convert energy locally into directed/persistent/non-random motion.

Page 4: Hyunggyu Park     박 형   규

Introduction to Fluctuation theorems

1. Nonequilibrium processes

2. Brief History of Fluctuation theorems

3. Jarzynski equality & Crooks FT

4. Experiments

5. Stochastic thermodynamics

6. Entropy production and FTs

7. Ending 2014 summer school on active systems, GIST, Gwangju (June 23, 25,

2014)

[Bustamante]

Hyunggyu Park

Page 5: Hyunggyu Park     박 형   규

Nonequilibrium processes

Why NEQ processes? - biological cell (molecular motors, protein reactions, …) - electron, heat transfer, .. in nano systems - evolution of bio. species, ecology, socio/economic sys., ... - moving toward equilibrium & NEQ steady states (NESS) - interface coarsening, ageing, percolation, driven sys., …Thermodynamic 2nd law - law of entropy increase or irreversibilityNEQ Fluctuation theorems - go beyond thermodynamic 2nd law & many 2nd laws. - some quantitative predictions on NEQ quantities (work/heat/EP) - experimental tests for small systems - trivial to derive and wide applicability for general NEQ pro-

cesses

Page 6: Hyunggyu Park     박 형   규

Brief history of FT (I)

Page 7: Hyunggyu Park     박 형   규

Brief history of FT (II)

Page 8: Hyunggyu Park     박 형   규

Thermodynamics & Jarzynski/Crooks FT

Thermodyn. 2nd law

Thermodyn. 1st law Syste

m

Phenomenological law

▶ Work and Free energy

Total entropy does not change during reversible pro-cesses.Total entropy increases during irreversible (NEQ) pro-cesses. Jarzynski equality

(IFT)

Crooks relation (DFT)

Page 9: Hyunggyu Park     박 형   규

Jarzynski equality & Fluctuation theorems

Simplest derivation in Hamiltonian dy-namics

-Intial distribution must be of Boltzmann (EQ) type.-Hamiltonian parameter changes in time. (special NE type).-In case of thermal contact (stochastic) ?

crucialgeneralized

still valid

state space

Page 10: Hyunggyu Park     박 형   규

Jarzynski equality & Fluctuation theorems

Crooks ``detailed”fluctuation theorem

time-reversal symmetryfor deterministic dynam-ics

Crooks detailed FT for PDF of Work

``Integral”FT

odd variable

Page 11: Hyunggyu Park     박 형   규

Experiments

DNA hairpin mechanically unfolded by optical tweezersCollin/Ritort/Jarzynski/Smith/Tinoco/Bustamante,Nature, 437, 8 (2005)

Detailed fluctuation theorem

Page 12: Hyunggyu Park     박 형   규
Page 13: Hyunggyu Park     박 형   규

PNAS 106, 10116 (2009)

Page 14: Hyunggyu Park     박 형   규

arXiv: 1008.1184

Page 15: Hyunggyu Park     박 형   규

Summary of Part I

Jarzynski equality

Crooks rela-tion

: time-reverse path

Page 16: Hyunggyu Park     박 형   규

Stochastic thermodynamics

Microscopic deterministic dynamics

Macroscopic thermodynamics

Stochastic dynamics

Page 17: Hyunggyu Park     박 형   규

Langevin (stochastic) dynamics

state space

trajectory

System

Page 18: Hyunggyu Park     박 형   규

Stochastic process, Irreversibility & Total entropy productionstate space

trajectory

time-rev

Page 19: Hyunggyu Park     박 형   규

Total entropy production and its components

System

Page 20: Hyunggyu Park     박 형   규

Fluctuation theorems

Integral fluctuation theo-rems

System

Page 21: Hyunggyu Park     박 형   규

Fluctuation theorems

Integral fluctuation theo-rems

Detailed fluctuation theorems

Thermodynamic 2nd laws

Page 22: Hyunggyu Park     박 형   규

Probability theory

• Consider two normalized PDF’s : state space

trajectory

• Define “relative entropy”

Integral fluctuation theorem

(exact for any finite-time trajec-tory)

Page 23: Hyunggyu Park     박 형   규

Probability theory

• Consider the mapping :

• Require

Detailed fluctuation theorem

reverse path

(exact for any finite t)

Page 24: Hyunggyu Park     박 형   규

Dynamic processes & Path probability ratio

: time-reverse path

Page 25: Hyunggyu Park     박 형   규

Langevin dynamics

: time-reverse path

Page 26: Hyunggyu Park     박 형   규

Fluctuation theorems

reverse pathIrreversibility (total entropy production)

Page 27: Hyunggyu Park     박 형   규

Fluctuation theorems

reverse pathWork free-energy relation (dissipated

work)

Page 28: Hyunggyu Park     박 형   규

Fluctuation theorems

reverse pathHouse-keeping & Excess entropy production

NEQ steady state (NESS) for fixed

Page 29: Hyunggyu Park     박 형   규

Dynamic processes with odd-parity variables?

Page 30: Hyunggyu Park     박 형   규

If odd-parity variables are introduced ???

Page 31: Hyunggyu Park     박 형   규

Ending Remarkable equality in non-equilibrium (NEQ) dynamic processes,

including Entropy production, NEQ work and EQ free energy. Turns out quite robust, ranging over non-conservative deterministic

system, stochastic Langevin system, Brownian motion, discrete Markov processes, and so on.

Still source of NEQ are so diverse such as global driving force, non-adiabatic volume change, multiple heat reservoirs, multiplicative noises, nonlinear drag force (odd variables), and so on.

Validity and applicability of these equalities and their possible modification (generalized FT) for general NEQ processes.

More fluctuation theorems for classical and also quantum systems Nonequilibrium fluctuation-dissipation relation (FDR) : Alternative

measure (instead of EP) for NEQ processes? Usefulness of FT? Effective measurements of free energy diff.,

driving force (torque), .. Need to calculate P(W), P(Q), … for a given NEQ process.