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By Yuqiong Xia 2014 Introduction Pharmaceutical Biotechnology

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Page 1: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

By Yuqiong Xia2014

Introduction

Pharmaceutical Biotechnology

Page 2: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

What is pharmaceutical biotechnology

2

Biotechnology use microorganisms, plants, and animals or parts to

produce useful compounds

Pharmaceutical biotechnology biotechnological manufacturing of pharmaceutical

products

生物制药工程 夏玉琼 西安电子科技大学

Page 3: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

What are biopharmaceuticals

3

Protein and peptides Anti-sense Oligonucleotides DNA

生物制药工程 夏玉琼 西安电子科技大学

Page 4: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

Biopharmaceuticals in market

4

Epoetin-α(红细胞生成素)(Epogen®, Eprex®, Procrit®)

Abciximab (阿昔单抗)(ReoPro®) Interferons-α(Intron®A, Roferon®A), interferons -β

(Avonex®, Rebif®, Betaseron®) Anti-TNF-α agents (Enbrel®, Remicade®, Humira®) Trastuzumab (曲妥单抗)(Herceptin®)

生物制药工程 夏玉琼 西安电子科技大学

Page 5: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

What we will learn

5

Part I Basics Molecular biotechnology Protein analysis Protein production and purification Formulation Pharmacokinetics and pharmacodynamics Protein immunogenicity Genomics

生物制药工程 夏玉琼 西安电子科技大学

Page 6: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

What we will learn

6

Part II Biopharmaceutical drugs Gene therapy Oligonucleotides Hematopoietic Growth Factors Interferons and Interleukins Insulin and Growth Hormones Monoclonal Antibodies

生物制药工程 夏玉琼 西安电子科技大学

Page 7: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

7

Reference

http://web.xidian.edu.cn/yqxia/teach.html

生物制药工程 夏玉琼 西安电子科技大学

Page 8: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

How to get your score

8

60% final exam 20% literature report 10% homework 10% attendance

生物制药工程 夏玉琼 西安电子科技大学

Page 9: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

Molecular Biotechnology

Pharmaceutical Biotechnology 生物制药工程 夏玉琼 西安电子科技大学

Page 10: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

Outline

10

Basics Cell Gene expression

Techniques Recombinant DNA technology Special DNA technology Cell cultures

生物制药工程 夏玉琼 西安电子科技大学

Page 11: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

11

The Prokaryotic Cell生物制药工程 夏玉琼 西安电子科技大学

Page 12: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

G+ cell and G- cell

12

G+ cell G- cell

PG of multilayer PG of Mono or double layer

Without LPS Containing toxic LPSOM: Outer Membrane IM: Inner MembranePG: peptidoglycan LPS: lipopolysaccharide

生物制药工程 夏玉琼 西安电子科技大学

Page 13: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

13

Plasmids

http://en.wikipedia.org/wiki/File:Plasmid_replication_(english).svg

生物制药工程 夏玉琼 西安电子科技大学

Page 14: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

14

The Eukaryotic Cell生物制药工程 夏玉琼 西安电子科技大学

Page 15: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

Outline

15

Basics Cell Gene expression

Techniques Recombinant DNA technology Special DNA technology Cell cultures

生物制药工程 夏玉琼 西安电子科技大学

Page 16: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

DNA replication

16

生物制药工程 夏玉琼 西安电子科技大学

Page 17: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

17

Transcription生物制药工程 夏玉琼 西安电子科技大学

Page 18: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

18

RNA splicing生物制药工程 夏玉琼 西安电子科技大学

Page 19: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

19

Translation生物制药工程 夏玉琼 西安电子科技大学

Page 20: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

Outline

20

Basics Cell Gene expression

Techniques Recombinant DNA technology Special DNA technology Cell cultures

生物制药工程 夏玉琼 西安电子科技大学

Page 21: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

21

Recombinant DNA technology/DNA cloning生物制药工程 夏玉琼 西安电子科技大学

Page 22: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

22

DNA transfer by electroporation

http://www.btxonline.com/product_images/uploaded_images/electroporation-cartoon.png

生物制药工程 夏玉琼 西安电子科技大学

Page 23: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

23

DNA transfer by phage生物制药工程 夏玉琼 西安电子科技大学

Page 24: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

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DNA transfer by conjugative plasmid

http://en.wikipedia.org/wiki/File:Conjugation.svg

生物制药工程 夏玉琼 西安电子科技大学

Page 25: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

25

DNA transfer by virusvirus infection

生物制药工程 夏玉琼 西安电子科技大学

Page 26: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

DNA transfer into nucleus

26

Only for animal and plant cells

生物制药工程 夏玉琼 西安电子科技大学

Page 27: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

DNA transfer by special conjugation

27

Infected plant cells develop crown gall 冠瘿病 Modified Agrobacterium can transfer DNA biological kingdom barriers are crossed in a natural fashion

根癌土壤杆菌

Ti:�tumor�inducing

生物制药工程 夏玉琼 西安电子科技大学

Page 28: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

DNA sources

28

Synthetic DNA organic DNA synthesis approach only for small proteins

cDNA (the copy DNA) From mRNA

DNA libraries

生物制药工程 夏玉琼 西安电子科技大学

Page 29: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

Production by recombinant DNA technology

29

Human insulin

Human growth hormone (hGH)

http://t0.gstatic.com/images?q=tbn:ANd9GcTyGER40Hz8bzW81RxVH-GeTdy4fUbZY9LiNi6K7VYSVNABmkwDhttp://gene-vinate.com/doc_images/hegf_image1.jpg

生物制药工程 夏玉琼 西安电子科技大学

Page 30: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

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Production of insulin by recombinant DNA tech

β-gal: β-半乳糖苷酶,乳糖启动子的产物

Cyanogen bromide:溴化氰,水解含有Met(甲硫氨酸)的多肽

生物制药工程 夏玉琼 西安电子科技大学

Page 31: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

31

Production of hGH by recombinant DNA tech

http://www.uic.edu/classes/bios/bios100/lectures/recomb01.jpg

Add a part of missing DNA

Add a leading DNA

Protein between IM and OM

生物制药工程 夏玉琼 西安电子科技大学

Page 32: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

Outline

32

Basics Cell Gene expression

Techniques Recombinant DNA technology Special DNA technology Cell cultures

生物制药工程 夏玉琼 西安电子科技大学

Page 33: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

Special DNA techniques

33

Gene sequencing DNA hybridization PCR technology

生物制药工程 夏玉琼 西安电子科技大学

Page 34: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

Gene sequencing by Sanger method

34 http://www.uic.edu/classes/bios/bios100/lectures/ddNTP.jpg

生物制药工程 夏玉琼 西安电子科技大学

Page 35: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

Gene sequencing by Sanger method

35http://www.scq.ubc.ca/genome-projects-uncovering-the-blueprints-of-biology/

C G A T

Primer Fragment to be sequenced

Fix reaction mixtures,each contains a ddNTP

Gel electrophoresis

TemplatePrimerDNA polymerasedA(T,C,G)TPddCTP

生物制药工程 夏玉琼 西安电子科技大学

Page 36: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

36

DNA hybridization to detect mutant

Modified from http://classes.midlandstech.edu/carterp/Courses/bio225/chap10/ss3.htm

DNA from white blood cells or amnion fluid (羊水)

Boil DNA to make it single-stranded

Hybridize with probes probe

Hybridized DNA

NonhybridizedDNA

生物制药工程 夏玉琼 西安电子科技大学

Page 37: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

37

PCR technology

https://www.boundless.com/image/the-process-of-pcr-in-dna-amplification--2/

生物制药工程 夏玉琼 西安电子科技大学

Page 38: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

38

Application of PCR technology

https://encrypted-tbn2.gstatic.comhttp://static.ddmcdn.com/gif/blood-cells.jpghttp://www.collegecrunch.org/wp-content/uploads/2009/09/forensic-science-350x350.jpg

Detect microbial pathogens in food

Detect bacterial and viral pathogens in clinical material

Determine the origin of DNAin forensic science

生物制药工程 夏玉琼 西安电子科技大学

Page 39: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

Outline

39

Basics Cell Gene expression

Techniques Recombinant DNA technology Special DNA technology Cell cultures

生物制药工程 夏玉琼 西安电子科技大学

Page 40: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

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Cultivation of microbesMicrobesGrowth medium: nutrients

http://en.wikipedia.org/wiki/File:Anthrax_culture.jpg

Harvest bioproducts

Bacteria growth curve

生物制药工程 夏玉琼 西安电子科技大学

Page 41: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

41

Animal Cell Cultures

http://www.zet.or.at/spool/gfx/1201165054-SerumfreeDB.jpghttp://en.wikipedia.org/wiki/Cell_culture

Need all nutrients, special growth factors and hormones

生物制药工程 夏玉琼 西安电子科技大学

Page 42: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

42

Plant Cell Cultures

http://www.ime.fraunhofer.de/en/businessareasMB/integrated_production_platforms/plant_cell_culture.html

can not be kept in the differentiated state, but the target protein only exists in some tissues

Add precursor in plant cells

生物制药工程 夏玉琼 西安电子科技大学

Page 43: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

Summary

43

Basics The difference between Gram+ and Gram- bacteria The properties of plasmid

Technologies Recombinant DNA technology: DNA transfer DNA hybridization

Cell culture Bacteria growth curve

生物制药工程 夏玉琼 西安电子科技大学

Page 44: Pharmaceutical Biotechnology - Xidianweb.xidian.edu.cn/yqxia/files/20140222_213050.pdfWhat is pharmaceutical biotechnology 2 Biotechnology use microorganisms, plants, and animals or

Summary of keywords

44

Prokaryotic cell, eukaryotic cell Bacteria, microbe, virus, plasmids Cytoplasm, cell envelop Transcription, translation, “central dogma” Recombinant DNA technology

生物制药工程 夏玉琼 西安电子科技大学