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The$toy$HMM for5’ splice$site$recogni5oncomprna.upf.edu/courses/Master_AGB/4_HiddenMarkovModels/...Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids

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Page 1: The$toy$HMM for5’ splice$site$recogni5oncomprna.upf.edu/courses/Master_AGB/4_HiddenMarkovModels/...Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids
Page 2: The$toy$HMM for5’ splice$site$recogni5oncomprna.upf.edu/courses/Master_AGB/4_HiddenMarkovModels/...Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids

The  toy  HMM  for  5’  splice  site  recogni5on  

Page 3: The$toy$HMM for5’ splice$site$recogni5oncomprna.upf.edu/courses/Master_AGB/4_HiddenMarkovModels/...Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids

x -­‐   A C C C G A G T A A begin  

Exon  

donor  

intron  

end  

i 0   1   2   3   4   5   6   7   8   9   10  

Π*

The  toy  HMM  for  5’  splice  site  recogni5on