1
2485-Pos Board B255 Snake Venom-Derived Peptides as Tools for Intracellular Delivery Margarida Rodrigues 1 , Andrea Santos 1 , Beatriz G. de la Torre 2 , Gandhi Ra ´dis-Baptista 3 , David Andreu 2 , Nuno Santos 1 . 1 Instituto de Medicina Molecular, Faculdade de Medicina da Universidade de Lisboa, Lisboa, Portugal, 2 Departament de Cie `ncies Experimentals i de la Salut, Universitat Pompeu Fabra, Barcelona, Spain, 3 Laborato ´rio de Bioquı ´mica e Biotecnologia, Instituto de Cie ˆncias do Mar, Universidade Federal do Ceara ´, Fortaleza, Brazil. Nucleolar-targeting peptides (NrTPs) are a new familiy of cell penentrating peptides (CPP). These peptides are derived from crotamine, a toxin from the venom of a South-American rattlesnake. The aim of this work was to study NrTPs’ molecular mechanism for translocation, as well as to determine their ability to deliver large molecules into cells. The biophysical characterization of these peptides revealed high partition coefficients for lipid vesicles of differ- ent compositions. Fluorescence quenching studies highlighted the role of an- ionic lipids (POPG) on the degree of peptide penetration into the membranes. Rhodamine B-labeled NrTPs were used to test translocation into giant multilamellar vesicles. Confocal microscopy results show that there is an efficient translocation across model membranes. NrTPs are able to penetrate different cell types, such as PBMC, HeLa, Bv173, MOLT4 and BHK21 cell lines. Furthermore, a conjugate of NrTP (NrTP6C) bound to b-galactosidase was prepared by chemical synthesis and tested in HeLa cells. Successfully cel- lular delivery of b-galactosidase was observed and quantified. In order to ex- pand the range of application of these peptides, we tested the delivery of nucleic acids mediated by NrTPs. Positive results suggest that they can be used as transfection reagents. The work done so far, with this new family of CPP, revealed strong interaction and translocation with lipid model systems, as well as efficient cellular delivery of biomolecules. Together, these results point towards a potential application of NrTPs in therapeutics. 2486-Pos Board B256 Bacterial Uptake of the Cell-Penetrating Peptide pVEC Begum Alaybeyoglu, Ihsan Omur Akdag, Elif Ozkirimli Olmez. Bogazici University, Istanbul, Turkey. The discovery of cell-penetrating peptides (CPPs), which can translocate through the cell membrane without the need for a receptor, has led to an in- creased interest in the design and development of peptide based drug delivery methods. CPPs are peptides of fewer than 30 residues derived from natural or unnatural proteins or chimeric sequences. The 18 amino acid long pVEC pep- tide is derived from murine vascular endothelial cadherin (VE-cadherin) pro- tein, which mediates physical contact between adjacent cells by homophilic dimerization. The pVEC peptide has been shown to cross the cell membrane. The pVEC sequence, LLIILRRRIRKQAHAHSK, has a hydrophobic N-termi- nus and a positively charged midsection. The residues contributing to the up- take of pVEC across the membrane were previously examined by alanine mutagenesis studies (Elmquist, A., M. Hansen, et al., 2006, Biochimica et bio- physica acta, 1758(6): 721-729) and the N-terminal residues were shown to be crucial in cellular uptake. Here, we use simulations to study the bacterial uptake of pVEC at atomic detail. Steered molecular dynamics simulations on the orig- inal pVEC and its various mutants are performed in an effort to determine the important peptide - membrane interactions on a residue basis and to elucidate the mechanism whereby pVEC passes through the membrane. 2487-Pos Board B257 Investigation of the Self-Association of d-Lysin Variants via Fluorescence Anisotropy Francis Dean O. Ablan, Paulo F. Almeida. University of North Carolina at Wilmington, Wilmington, NC, USA. The self-association processes of three synthetic variants of the S. aureus pep- tide delta-lysin were studied in aqueous solution using fluorescence anisotropy. The goal was to determine if any of these variants were capable of oligomeri- zation, as delta-lysin is known to form tetramers in aqueous solutions at concentrations higher than 1 microM. The three analogues studied were delta-lysette, delta-lysette 26 and DL-2A. delta-Lysette and delta-lysette 26 both have a net charge of þ2 at pH 7.5, whereas DL-2A and delta-lysin have a net charge of zero. It was expected that the two charged variants would each begin aggregating at higher concentrations in aqueous solution, while DL-2A would aggregate in a manner similar to delta-lysin. The analysis of the self-association of each peptide was conducted in two stages. First, the Trp residues were excited and the anisotropy of the resulting emission was measured as a function of peptide concentration. Second, to determine the de- gree of oligomerization at given peptide concentrations, Perrin plots were gen- erated from data obtained at peptide concentrations that showed either low or high anisotropy measurements. Initial results indicated that delta-lysette 26 oligomerizes at concentrations near 20 microM, whereas DL-2A already oligo- merizes starting at 0.05 microM. This research was supported by NIH Grant GM072507. 2488-Pos Board B258 Self-Assembly of the Membrane-Bound b-Stranded Peptide (KIGAKI) 3 into Immobilized Amyloid Fibrils Observed by Solid-State 19 F-NMR Parvesh Wadhwani, Erik Strandberg, Nico Heidenreich, Jochen Buerck, Susanne Fanghaenel, Anne S. Ulrich. Karlsruhe Inst. of Technology, Karlsruhe, Germany. The structure and membrane alignmentof b-stranded antimicrobial peptide KIGAKI [(KIGAKI) 3 -NH 2 ] has been determined in oriented DMPC bilayers using circular dichroism and solid state 19 F-NMR spectroscopy. CF 3 -Bpg was used as a reporter group to label the peptide, where several IIe or Ala res- idues were individually replaced one by one. At high peptide-to-lipid molar ratios (P/L) of 1:200 or above, the 19 F dipolar coupling of all five labels exhibits the maximum possible value, which is indicative of a parallel align- ment of the Ca-CF 3 bond vector with respect to the bilayer normal. This finding suggests that at high concentration KIGAKI self-assembles into immo- bilized -sheets, which lie flat on the membrane surface. Transmission electron microscopy images reveal that the aggregated KIGAKI forms amyloid like fi- brils. At low peptide concentrations, on the other hand, the dipolar couplings of the CF 3 -groups indicate that their time-averaged alignment is still parallel to the bilayer normal, but the mobility of the peptides increases drastically and reflects a monomeric state. Correspondingly, the flexible b-strands float on the membrane surface and undergo motional averaging in the 2-dimensional membrane plane, similar to intrinsically unstructured proteins in solution. This is the first example of concentration dependent transition of a flexible b-strand to an amyloid like fibril in membranes that is directly observed by solid state NMR. 2489-Pos Board B259 Phosphatidylethanolamine Enhances Amyloid Fiber Dependent Mem- brane Fragmentation Michele F.M. Sciacca 1 , Jeffrey R. Brender 1 , Dong-kuk Lee 2 , Ayyalusamy Ramamoorthy 1 . 1 University of Michigan, Ann Arbor, MI, USA, 2 Seoul National University of Science and Technology, Seoul, Korea, Republic of. The toxicity of amyloid-forming peptides has been hypothesized to reside in the ability of protein oligomers to interact with and disrupt the cell membrane. Much of the evidence for this hypothesis comes from in vitro experiments using model membranes. However, the accuracy of this approach depends on the ability of the model membrane to accurately mimic the cell membrane. The ef- fect of membrane composition has been overlooked in many studies of amyloid toxicity in model systems. We show here that PE (phosphatidylethanolamine), an abundant lipid in mitochondrial and plasma membranes, strongly modulates the membrane disruption by IAPP, an amyloidogenic protein involved in type II diabetes. Using insulin as an inhibitor to block fiber formation, we have previously shown that membrane disruption by IAPP is a two-stage process with a different mechanism occurring in each phase The first phase of membrane disruption oc- curs within the lag-time of fiber formation, while the second phase closely fol- lows fiber formation and results in total disruption of the membrane by fragmentation into small micelle like structures. While PE initally surpresses the membrane disruption in the first phase, it results in greater membrane frag- mentation during fiber formation. The origins of this behavior result from the relative affinities of different oligomeric species of IAPP. While monomeric IAPP has weaker affinity for membranes containing PE, solid-state NMR shows that amyloid fibers of IAPP interact strongly and specifically with PE in mixed bilayers. Since membrane disruption through fiber growth has been detected for other proteins and reduction of PE levels is correlated with a de- crease in cell toxicity, it is likely that a similar mechanism is operative for other toxic amyloidogenic proteins. 2490-Pos Board B260 Copper Modulates Ab42 Aggregation in Model Membranes Marc-Antoine Sani, Daniel K. Weber, John D. Gehman, Frances Separovic. University of Melbourne, Melbourne VIC, Australia. The amyloid-beta (Ab) peptide is associated with Alzheimer’s disease (AD). Evidence suggests that Ab interaction with neuronal cell membranes correlates strongly with neurodegeneration but understanding the molecular mechanism remains a challenge. The role of heavy metals often found in amyloid plaques from AD brain patients is another path for investigation. Our recent findings support the role of lipid membrane composition as crucial in many biological mechanisms. We observed that different lipids promote different fibril 488a Tuesday, February 28, 2012

Self-Assembly of the Membrane-Bound β-Stranded Peptide (KIGAKI)3 into Immobilized Amyloid Fibrils Observed by Solid-State 19F-NMR

  • Upload
    anne-s

  • View
    213

  • Download
    1

Embed Size (px)

Citation preview

488a Tuesday, February 28, 2012

2485-Pos Board B255Snake Venom-Derived Peptides as Tools for Intracellular DeliveryMargarida Rodrigues1, Andrea Santos1, Beatriz G. de la Torre2,Gandhi Radis-Baptista3, David Andreu2, Nuno Santos1.1Instituto de Medicina Molecular, Faculdade de Medicina da Universidade deLisboa, Lisboa, Portugal, 2Departament de Ciencies Experimentals i de laSalut, Universitat Pompeu Fabra, Barcelona, Spain, 3Laboratorio deBioquımica e Biotecnologia, Instituto de Ciencias do Mar, UniversidadeFederal do Ceara, Fortaleza, Brazil.Nucleolar-targeting peptides (NrTPs) are a new familiy of cell penentratingpeptides (CPP). These peptides are derived from crotamine, a toxin from thevenom of a South-American rattlesnake. The aim of this work was to studyNrTPs’ molecular mechanism for translocation, as well as to determine theirability to deliver large molecules into cells. The biophysical characterizationof these peptides revealed high partition coefficients for lipid vesicles of differ-ent compositions. Fluorescence quenching studies highlighted the role of an-ionic lipids (POPG) on the degree of peptide penetration into themembranes. Rhodamine B-labeled NrTPs were used to test translocation intogiant multilamellar vesicles. Confocal microscopy results show that there isan efficient translocation across model membranes. NrTPs are able to penetratedifferent cell types, such as PBMC, HeLa, Bv173, MOLT4 and BHK21 celllines. Furthermore, a conjugate of NrTP (NrTP6C) bound to b-galactosidasewas prepared by chemical synthesis and tested in HeLa cells. Successfully cel-lular delivery of b-galactosidase was observed and quantified. In order to ex-pand the range of application of these peptides, we tested the delivery ofnucleic acids mediated by NrTPs. Positive results suggest that they can beused as transfection reagents. The work done so far, with this new family ofCPP, revealed strong interaction and translocation with lipid model systems,as well as efficient cellular delivery of biomolecules. Together, these resultspoint towards a potential application of NrTPs in therapeutics.

2486-Pos Board B256Bacterial Uptake of the Cell-Penetrating Peptide pVECBegum Alaybeyoglu, Ihsan Omur Akdag, Elif Ozkirimli Olmez.Bogazici University, Istanbul, Turkey.The discovery of cell-penetrating peptides (CPPs), which can translocatethrough the cell membrane without the need for a receptor, has led to an in-creased interest in the design and development of peptide based drug deliverymethods. CPPs are peptides of fewer than 30 residues derived from natural orunnatural proteins or chimeric sequences. The 18 amino acid long pVEC pep-tide is derived from murine vascular endothelial cadherin (VE-cadherin) pro-tein, which mediates physical contact between adjacent cells by homophilicdimerization. The pVEC peptide has been shown to cross the cell membrane.The pVEC sequence, LLIILRRRIRKQAHAHSK, has a hydrophobic N-termi-nus and a positively charged midsection. The residues contributing to the up-take of pVEC across the membrane were previously examined by alaninemutagenesis studies (Elmquist, A., M. Hansen, et al., 2006, Biochimica et bio-physica acta, 1758(6): 721-729) and the N-terminal residues were shown to becrucial in cellular uptake. Here, we use simulations to study the bacterial uptakeof pVEC at atomic detail. Steered molecular dynamics simulations on the orig-inal pVEC and its various mutants are performed in an effort to determine theimportant peptide - membrane interactions on a residue basis and to elucidatethe mechanism whereby pVEC passes through the membrane.

2487-Pos Board B257Investigation of the Self-Association of d-Lysin Variants via FluorescenceAnisotropyFrancis Dean O. Ablan, Paulo F. Almeida.University of North Carolina at Wilmington, Wilmington, NC, USA.The self-association processes of three synthetic variants of the S. aureus pep-tide delta-lysin were studied in aqueous solution using fluorescence anisotropy.The goal was to determine if any of these variants were capable of oligomeri-zation, as delta-lysin is known to form tetramers in aqueous solutions atconcentrations higher than 1 microM. The three analogues studied weredelta-lysette, delta-lysette 26 and DL-2A. delta-Lysette and delta-lysette 26both have a net charge of þ2 at pH 7.5, whereas DL-2A and delta-lysin havea net charge of zero. It was expected that the two charged variants wouldeach begin aggregating at higher concentrations in aqueous solution, whileDL-2A would aggregate in a manner similar to delta-lysin. The analysis ofthe self-association of each peptide was conducted in two stages. First, theTrp residues were excited and the anisotropy of the resulting emission wasmeasured as a function of peptide concentration. Second, to determine the de-gree of oligomerization at given peptide concentrations, Perrin plots were gen-erated from data obtained at peptide concentrations that showed either low orhigh anisotropy measurements. Initial results indicated that delta-lysette 26

oligomerizes at concentrations near 20 microM, whereas DL-2A already oligo-merizes starting at 0.05 microM. This research was supported by NIH GrantGM072507.

2488-Pos Board B258Self-Assembly of the Membrane-Bound b-Stranded Peptide (KIGAKI)3into Immobilized Amyloid Fibrils Observed by Solid-State 19F-NMRParvesh Wadhwani, Erik Strandberg, Nico Heidenreich, Jochen Buerck,Susanne Fanghaenel, Anne S. Ulrich.Karlsruhe Inst. of Technology, Karlsruhe, Germany.The structure and membrane alignmentof b-stranded antimicrobial peptideKIGAKI [(KIGAKI)3-NH2] has been determined in oriented DMPC bilayersusing circular dichroism and solid state 19F-NMR spectroscopy. CF3-Bpgwas used as a reporter group to label the peptide, where several IIe or Ala res-idues were individually replaced one by one. At high peptide-to-lipid molarratios (P/L) of 1:200 or above, the 19F dipolar coupling of all five labelsexhibits the maximum possible value, which is indicative of a parallel align-ment of the Ca-CF3 bond vector with respect to the bilayer normal. Thisfinding suggests that at high concentration KIGAKI self-assembles into immo-bilized -sheets, which lie flat on the membrane surface. Transmission electronmicroscopy images reveal that the aggregated KIGAKI forms amyloid like fi-brils. At low peptide concentrations, on the other hand, the dipolar couplingsof the CF3-groups indicate that their time-averaged alignment is still parallelto the bilayer normal, but the mobility of the peptides increases drastically andreflects a monomeric state. Correspondingly, the flexible b-strands float on themembrane surface and undergo motional averaging in the 2-dimensionalmembrane plane, similar to intrinsically unstructured proteins in solution.This is the first example of concentration dependent transition of a flexibleb-strand to an amyloid like fibril in membranes that is directly observed bysolid state NMR.

2489-Pos Board B259Phosphatidylethanolamine Enhances Amyloid Fiber Dependent Mem-brane FragmentationMichele F.M. Sciacca1, Jeffrey R. Brender1, Dong-kuk Lee2,Ayyalusamy Ramamoorthy1.1University of Michigan, Ann Arbor, MI, USA, 2Seoul National University ofScience and Technology, Seoul, Korea, Republic of.The toxicity of amyloid-forming peptides has been hypothesized to reside in theability of protein oligomers to interact with and disrupt the cell membrane.Much of the evidence for this hypothesis comes from in vitro experiments usingmodel membranes. However, the accuracy of this approach depends on theability of the model membrane to accurately mimic the cell membrane. The ef-fect of membrane composition has been overlooked in many studies of amyloidtoxicity in model systems. We show here that PE (phosphatidylethanolamine),an abundant lipid in mitochondrial and plasma membranes, strongly modulatesthe membrane disruption by IAPP, an amyloidogenic protein involved in typeII diabetes.Using insulin as an inhibitor to block fiber formation, we have previouslyshown that membrane disruption by IAPP is a two-stage process with a differentmechanism occurring in each phase The first phase of membrane disruption oc-curs within the lag-time of fiber formation, while the second phase closely fol-lows fiber formation and results in total disruption of the membrane byfragmentation into small micelle like structures. While PE initally surpressesthe membrane disruption in the first phase, it results in greater membrane frag-mentation during fiber formation. The origins of this behavior result from therelative affinities of different oligomeric species of IAPP. While monomericIAPP has weaker affinity for membranes containing PE, solid-state NMRshows that amyloid fibers of IAPP interact strongly and specifically with PEin mixed bilayers. Since membrane disruption through fiber growth has beendetected for other proteins and reduction of PE levels is correlated with a de-crease in cell toxicity, it is likely that a similar mechanism is operative for othertoxic amyloidogenic proteins.

2490-Pos Board B260Copper Modulates Ab42 Aggregation in Model MembranesMarc-Antoine Sani, Daniel K. Weber, John D. Gehman, Frances Separovic.University of Melbourne, Melbourne VIC, Australia.The amyloid-beta (Ab) peptide is associated with Alzheimer’s disease (AD).Evidence suggests that Ab interaction with neuronal cell membranes correlatesstrongly with neurodegeneration but understanding the molecular mechanismremains a challenge. The role of heavy metals often found in amyloid plaquesfrom AD brain patients is another path for investigation. Our recent findingssupport the role of lipid membrane composition as crucial in many biologicalmechanisms. We observed that different lipids promote different fibril