TRACING THE CRIMINAL Part ten: Criminals fungi THE CRIMINAL Part ten: Criminals – fungi Institute...

TRACING THE CRIMINAL

Part ten:

Criminals – fungi

Institute for microbiology shows

Instead of an introduction

bdadafoto.webzdarma.cz/rostliny_houby.htm

Survey of topics

Characteristics of fungi

Examples of mycotic diseases

Morphology and physiology of fungi

Diagnostics of mycoses

Characteristics

of fungi

Common characteristics of fungi Fungi are eukaryotic organisms, unlike procaryotic

bacteria

Their cell wall is formed by polysacharids, it has a

different composition than that of G+ bacteria.

Neverthreless, it stains violet („gram-positive“)

Fungi use to have a slower cell cycle than bacteria

infections use to be prolonged

Majority of antibacterial agents is not effective, so we

have to use special drugs – antimycotics, that are not

effective againts bacterial infections

Fungi and health

In the practical we are going to speak about

microscopical fungi. But we shoud not forget about

fungi with macroscopical fruits

Fruits of macroscopical fungi (Amanita phalloides,

Inocybe patouillardi, Amanita panterina, Entoloma

eulividum, halucinogenous fungi) cause diseases and

death of tens of persons every year (especially in

countries like Czechia, where fungi picking is a very

common hobby). In case of Amanita phalloides, the

result is often death.

Some toxical mushrooms

1 Amanita

phaloides

2 Inocybe

Patouillardi

3 Amanita

panterina

4 Entoloma

eulividum

Do you

know?

cs.wikipedia.org/wiki/Otrava

_houbami

http://www.micologia.net/g3

/Amanita-

panterina/Amanita_pantheri

na_001

http://www.houbar.cz/default.aspx?show=3&text=3

cs.wikipedia.org/wiki/Z%C3%A

1vojenka_olovov%C3%A

1

2

3

4

Medically important fungi

Microscopical fungi may cause in human body

Mycoses – fungal inflammations

Mycotoxicoses – toxical action

Mykoalergoses – allergy to fungi

Mycetisms – fungus present in the body, acting only

in form of pressure to surronding tissues

The most imporant are mycoses, that may be

subclassified into

surface (skin and mucosal) mycoses and

organ and systemic mycoses

Examples of

mycotic

diseases

Story one Mrs. Udder came to dpt. of professional medicine with

„fungus“ on her hand.

She wanted her disease to be accepted as

proffessional disease, as she works with cattle on a

farm. Good luck for mrs. Udder: the causative agent of

the disease was found to be Epidermophyton

floccosum, that is supposed to by rather antropofilic

species of so named dempatophyta, so it is

transmitted rather person-to-person than from

animals; nevertheless, actual guidlines say that mere

professional exposition is sufficient for considering

such case professional, not regarding the species

diagnostics

Dermatophytes So named dermatophytes belong among the most

common agents of skin mycoses (including mycoses of skin adnexa, i. e. hair, hairs and nails)

Among dermatophytes there are genera Trichophyton, Epidermophyton and Microsporum

According to the most common ways of transmission, they are anthropophilic (person-to-person), zoophilic (from animals) and geophilic (from environment)

The disease have various names in relation with their localisation (tinea manus, pedis, barbae etc.).

Treatment is usually local (ointments, shampoo). The mostly used drugs are nystatin, clotrimazol, ketokonazol etc.

Dermatomycoses of various parts of body

www.mycolog.com/chapter23.htm

Tinea barbae www.emedicine.com

Tinea pedis www.itg.be

Onychomycosis www.itg.be

A severe infection of Epidermophyton

floccosum before and after treatment www.mycolog.com/chapter23.htm

Dermatophytes

1 Epidermophyton floccosum

2 Trichophyton rubrum

3.Trichophyton mentagrophytes

1

3

2

3× www.medmicro.info

Story two

Mr. Leopold worked for an archive. All days

he spent in the wet and dusty archive. Step

by step he started to cough. For a moment,

he was affraid of TB, but if was not TB. After

assessment of the true reason and after the

proper treatment Leopold problems started to

disapear – again, slowly, step by step.

Causative agent was

Aspergillus niger

Aspergilli usually attack diseased people, nevertheless, they are able to attact a heathy one, too.

Aspergillosis is often a professional disease of persons working in wet, dusty places, full of mold spores

Aspergillus disease is an example of organ or systemic mycoses

www.medmicro.info

aapredbook.aappublications.org

www.nature.com

Aspergillus infections 1

Aspergillus infections 2

www.njmoldinspection.com

www.nlm.nih.gov

Aspergillus

niger

www.medmicro.info

www.medmicro.info

http://fungifest.com

Aspergillus sp.

www.sci.muni.cz

129.215.156.68

www.mycolog.com

Aspergillus sp.

education.med.nyu.edu

healthresources.car

emark.com

A real case: aspergillosis as an influenza

complication in a 38 year old woman

A female, born 1970, Brno-city, primary infection of upper and lower respiratory ways, as a causative agent proven influenza type B and Staphylococcus aureus. Death as a result of a heavy mycotic – Aspergillus pneumonia and septicemia, with lung and tracheobronchial lymphonodes anthracosis, exitus 26th Mar 2008. No risk factors in anamnesis, only about 15 years of smoking 15–20 cigarettes daily. (From regional public health office of South Moravia)

Systemic mycoses They attack more organs, often the whole body

Usually they follow after a primary disease:

Diabetes mellitus

Immunity defects, WBC tumors etc.

Transplanted pacients

Caused by: Candida, Penicillium, Aspergillus,

Histoplasma, Pneumocystis and other

Treatment: strong, broad-spectered and highly

effective antimycotics are used (amphotericin B,

voriconazole, itraconazole, flucytosin)

Zygomycets Zygomycets – true molds form non-septed

hyphae. They produce a strong growth, they are even able to pull the lid of the Petri dish up.

Infections are rare, but they occur more and more e. g. in diabetics. Normally they live as saprophytes, e. g. on fruits. They are able to grow quickly, e. g. through wall of large vessels. They may cause even so called living trombus with a quick death of such a patient.

Another typical feature is quick growth from nasal cavity to brain, even during a few hours

The most important genera: Rhizopus & Mucor

Mucor

www.medmicro.info

Mucor sp. http://www.mycology.adelaide.edu.au/gallery

www.zsdukla.cz/nature/article86.php

Dimorph fungi Cause mycoses in immunodeficient patients

Coccidioides immitis grows more quickly than

the others. In patients with small immune

defficiencies the infection is asymptomatical or

with small symptomas only. It is worse in

persons with a developped AIDS, where you

can see primary lung infections etc.

Histoplasma capsulatum is seen mostly in the

USA, but also in Africa.

More genera: Blastomyces,

Paracoccidiodioides, Sporothrix and other

Blastomycosis www.mycolog.com/chapter23.htm

Coccidioides

immitis

http://www.mycology.adelaide.edu.au/gallery

Coccidioides immitis: „strange fungus“ www.vfce.arizona.edu

Histoplasma capsulatum www.mycolog.com/chapter23.htm

http://www.mycology.adelaide.edu.au/gallery

Penicillium marneffei www.pasteur.fr

Story three Ellen was scared. She loved her boyfried very much, but

the intime moments were complicated by vaginal

pruritus.

Well, she allready visited her gynecologist, and she got

vaginal suppositoria. They helped always for a

moment only.

Ellen was really angry. She changed her gynecologist.

The new gynecologist understood, that local treatment

will not be sufficient in this specific case. Systemic

treatment was able to destroy the causative agent

both in vagina and intestinal reservoir. So her

problems finished.

Causative agent was

Candida albicans, the most common among medically

important yeasts. Vaginal mycoses (mostly

candidoses) are very unpleasant and difficult.

The vaginal candidoses are multifactorial. Important

are dietary influences (yeasts love sweet, so if does so

their host, they would enjoy it), but also hormonal

influences, pregnancy, diabetes and others.

The reservoir of the infection is the intestine.

Recidivating infections should not be treated only

localy (suppositoria) but by combination of a local and

systemic treatment.

Vaginal mycosis of course should not be solved

without thinking about the total status of the organism.

Candida treatment Candidosis may be both surface (skin, mucosal)

and systemic.

Among mucosal candidoses, beside vaginal mycoses also oral mycosis is seen (in sucklings and people with diseased immunity)

Skin candidoses are common, too (for example „diaper dermatitis“ in sucklings)

Systemic infections are present mostly in immunodefficient persons and persons treated by combination of broad-spectered antibiotics

The most common is Candida albicans, also C. tropicalis, C. glabrata, C. krusei, C. parapsillosis etc.

In some of them, we can see natural resistances (e. g. C. krusei for fluconazole)

Genital

candidosis

www.vita.csc.pl/zakazenia-drozdzakowe.php

www.telemedicine.org/common/common.htm.

Oral candidosis

ww.asnanak.net/ar/article.php?sid=62.

www.mycol

og.com/cha

pter23.htm Intertrigo and diaper

dermatitis www.itg.be

http://webs.wichita.edu/mschneegurt/biol103/lecture21/lecture21.html

Intestinal candidosis

http://george-eby-

research.com/html/depression-anxiety.html

Causative agents: Candida albicans pathmicro.med.sc.edu

www.doctorfungus.org

www.schoolwork.de

Candida

albicans

www.medmicro.info

www.pferdemedizin.com

www.medizin-forum.de

Candida

http://www.bmb.leeds.ac.uk/mbiology/ug/ugteach/icu8/std/candidgram.html

Other yeasts and yeast-like

organisms

Very dangerous is Cryptococcus neoformans, in immunodeficient persons it may cause pneumonia, meningitis, sepsis

Pneumocystis jiroveci is a very strange fungus, some time ago it was supposed to be a protozoon (for example a stage of trypanosomas)

Genus Saccharomyces contains wine and bear yeasts. It was supposed to be non-pathogenous, but some studies say that 8 % of vaginal mycoses may be caused by this agent.

Cryptococcus neoformans http://www.higiene.edu.uy/ciclipa/parasito/Cryptococcus.jpg

http://www.mycology.adelaide.edu.au/gallery

Pneumocystis

jiroveci

www.medmicro.info

Saccharomyces cerevisiae

www.zsdukla.cz/nature/article86.php

Geotrichum

candidum

www.medmicro.info

Rhodotorula

rubra

www.medmicro.info

65.254.85.56

Morphology

and physiology

of fungi

Morphology of fungi

(micromycetes)

A blastoconidia is an oval or round cell,

characteristic for yeasts. Often we see

budding blastoconidia (blastospores).

A hypha is a fiber. It may be branched, septed

or not septed. A sample of hyphae is called

mycelium, that may be

vegetative, anchoring the fungus in the substrate

generative or air mycelium, bearing generatory

organs of the fungus

Multiplication of fungi

Multiplication of fungi may be sexual or

asexual. It is simillar like in plants, here,

too, we have both asexual and sexual

multiplication methods. It is recomended to

use terminology like that:

for sexual multiplication particles use term

spore (do not confuse with bacterial spores!)

for asexual, vegetative reproductory particles

to use term conidia

Some

morphological

features in

fungi

gsbs.utmb.edu

education.med.nyu.edu

How individual parts of a fungus

are called www.mc.uky.edu

Life

cycle

of a

fungus

/media.wiley.com

How an arthroconidia are formed

gsbs.utmb.edu

Life

cycle

of a

fungus

/media.wiley.com

How an arthroconidia are formed

gsbs.utmb.edu

Physiology of micromycetes

Fungi multiply usually more slowly than

bacteria, but there are big differences. They

grow easily even on poor media.

Majority of medically important media grow

well even at lower temperature. We culture

ther at 30 °C rather than at 37 °C. Another

way is a parallel culture at 22.°C and 37 °C,

suitable for dimorph fungi

Biochemical activity is rich

especially in yeasts

Diagnostics of

mycoses

Sampling an diagnostics in

surface mycoses

Sampling: particles of skin, parts of nails, hairs etc; always the specimen should contain the site where the inflammation is active, and not to catch contamination; even surface disinfection is recommended (to destroy contaminants from skin surface)

Proper diagnostics: microscopical (files in tissue) and culture. Microscopy is more important – even contamination may be cultured, but hyphae growing through an epitelium are a clear sign of an infection

Sampling for dermatomycoses

Main rules for sampling:

do not send swab only, send several particles of

skin (nail, hair, hairs etc.)

perform surface disinfection

superficial layer should be discarded, not used

in larger infections sample from margins (here

the fungus is active)

Diagnostics of systemic mycoses

Not only the proper mycosis diagnostic is to be

performed. It is also always necessary to find what is

primary cause of the disease (if we do not know):

immunodefficienty, diabetes, tumor etc.

Diagnostics: for direct diagnostics any relevant material: blood

for blood culture, punctates, excisions etc.

modern methods enable e. g. direct detection of

antigens in blood (mannans, glucans)

indirect detection – serum antibodies (aspergilli)

Sampling in candidosis

In skin and mucosal form we use swabs mostly

in transport medium FungiQuick or (in genital

swabs only) C. A. T.

In systemic form swabs, too, or blood, punctate

etc.

C. A. T. Foto O. Z.

Diagnostics of candidoses

The basic is culture. For identification of candida we use chromogenous media and biochemical methods (mutual differences in metabolism between candida)

Microscopically in a wet mount (C. A. T.), in Gram and Giemsa stain we can see oval cells, often budding, sometimes even so called pseudomyelia

It is also possible to test in vitro susceptibility, but tests are less reliable than in bacteria

A modern method is the direct detection of mannan antigens in blood

Fungi on bacteriological media

Although we use special media for fungi, many

fungi grow on bacteriological media, too. And

not only this: some of them, mostly Candida,

have often feature very simillar to bacterial

colonies.

To differenciate colonies of Candida from

colonies of staphylococci is often difficult. Smell

may help (bread, yeast); when nothing other

helps, smear is useful.

A selective medium for fungi

The typical medium for yeasts, Sabouraud agar,

is not selective itself, and many bacteria could

grow on it

For culture of mycoorganisms we use

Sabouraud agar with antibiotics, that nearly

excludes growth of bacteria. (In practice,

nevertheless, we often meet very resistant

strains of Pseudomonas, that grow where they

want )

Chromogenic media – principle

(Review from spring term)

CHROMOGENIC media contain a stuff that is

originally colourless (a chromogene)

Only in presence of a specific reaction they

become coloured (splitting of a substrate)

The medium may contain more chromogenes

with bound substrates for warious bacteria or

fungi

FLUOROGENIC media are principially simillar,

but with a fluorescent stain

Chromogenic medium at

diagnostics of Candida

We use various chromogenic media. Some

differenciate Candida albicans from other media only,

some other differenciate mutually several species of

Candida.

On the medium used in our Task 2c, C. albicans is

green, C. tropicalis blue, C. glabrata smooth pink and

C. krusei rough pink.

If a strain is not determined using this medium, we

have to use another test (e. g. biochemical test)

C. albicans C. glabrata

C. tropicalis C. krusei

Biochemical identification of

yeasts Like bacteria, fungi, too (but not filamentous

fungi) may be identified biochemically. (Also

use of a chromogenic medium is based on

selective splitting of various substrates.)

One of commonly used test is Auxacolor, that

replaced ancient sets of „auxanograms“

(testing use of sugars) and „zymograms“

(testing breakdown of sugars)

Diffusion disc test of susceptibility to

antimicromial agents

With some exceptions it is valid, that

antibacterial agents are useless in mycotic

diseases.

Similarly, antimycotics do not act to majority

of bacterial agents

Fungi cannot be cultured on MH, they need

Sabouraud agar

To reading of antimycotic tests

In amphotericin B a strain is considered to be

susceptible even in small zone, but there

should be no colonies inside the zone

In azolic antimycotics (the names ending „-

conazol“) the zone should be large enough,

but „something“ may be present inside the

zone, if this „sometning“ is not more than

20 % of intensity of growth inside the zone

Also microscopy is different than that of yeasts.

It is more important here. We can observe

various types of spores and conidiae.

We observe without immersion, objective

multiplying 4× or 10×, eventually 40 ×

Microscopy of filamentous fungi

Results of culture in filamentous fungi are

different from yeast, both on Sabouraud agar

and eventually blood agar.

Some of them, especially dermatophytes, grow very

slowly. This is because of them, why Sabouraud

agar is poured into test tubes.

Biochemical differenciation is usually not performed

here, unlike the situation in yeasts.

Culture of filamentous fungi

Example of indirect diagnostics of

fungi: microprecipitation in agar

From the middle hole, antigen

diffunds (marked red)

From the positive hole with

serum No. 2 the antibody

diffunds (blue)

From negative holes (sera No.

1, 3, 4) of course nothing

diffunds.

In place of meeting of antigen

and antibody, precipitation

line is formed (green)

The test is a

repeating from J 07.

Precipitation line is

formed between the

hole with antigen

and the hole with

antibody

Holes with

patient‘s sera 1–4

Hole with

antigen

positive

Precipitation line

– reason of

positivity

Example of indirect diagnostics of

fungi: microprecipitation in agar

The End

http://www.jiricisar.com/blog/photo/20050824_kremenac.jpg