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7/30/2019 13693780310001656795
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Distribution of paracoccidioidomycosis: determination of
ecologic correlates through spatial analyses
LIGIA BARROZO SIMOES*, SILVIO ALENCAR MARQUES$ & EDUARDO BAGAGLI*
*Departamento de Microbiologia e Imunologia, Instituto de Biociencias, and$Departamento de Dermatologia e
Radioterapia, Instituto de Biociencias, Universidade Estadual Paulista/UNESP, Universidade Estadual Paulista/UNESP, Botucatu,
SP, Brazil
Paracoccidioidomycosis (PCM) is endemic in Latin America and in countries like
Brazil it carries a high mortality rate. The fungus habitat has not been precisely
determined. The present study aims to identify ecologic correlates based on PCM
distribution in a hyper-endemic area in southeastern Brazil. The Geographic
Information System (GIS) and spatial statistics were used to associate environ-
mental attributes, human population density and, PCM distribution. By means of
the Pearson r correlation coefficient, the highest statistically significant associa-
tions with prevalence density were the percent area (by county) of: basaltic rocks
(r0/0.63; PB/0.0001), Podzolic soils (r0/(/0.48; PB/0.001), Latosol soils(r0/0.40; PB/0.01), mean annual precipitation between 1500 and 1600 mm
(r0/0.46; PB/0.001) and, mean precipitation during the wet season between 940
and 1040 mm (r0/(/0.44; PB/0.01). Soil texture and precipitation analyzed
together reached r0/0.61 (PB/0.000002) for fine-textured soils with annual
precipitation above 1400 mm. Environmental correlates indicate that moisture
availability plays an important role in PCM distribution.
Keywords ecological factors, Geographic Information System, Paracoccidioides
brasiliensis, Paracoccidioidomycosis
Introduction
Paracoccidioidomycosis (PCM), caused by the fungus
Paracoccidioides brasiliensis, represents the most im-
portant systemic mycosis in Latin America [1]. PCM is
endemic from Mexico (238N) to Argentina (358S), with
the largest number of occurrences in Brazil, Venezuela
and Colombia [2]. Because PCM is not a notifiable
disease, it is not possible to calculate its real prevalence
and incidence [3]. It is the systemic mycosis with the
highest mortality rate among immunocompetent pa-
tients in Brazil [4]. Overall nationwide mortality per
area during the period 1980/1995 was 3.73/10 000 km
2
with non-homogeneous distribution throughout the
country. The mortality rate is higher than that of
leishmaniasis, and it is the eighth most common cause
of death among the chronic/recurrent infectious and
parasitic diseases in Brazil [4]. Furthermore, the disease
is now emerging in new areas. Recent environmental
and socioeconomic changes in the Brazilian Amazon,
for example, have been associated with new occurrences
of PCM-infection in Amerindian populations [5].
As the mucocutaneous lesions are relatively frequent,
during a certain time it has been claimed that people in
rural areas could have acquired PCM by the common
habit of placing vegetable material in the mouth andchewing it. Nevertheless, there is strong evidence
indicating that the principal route of infection is the
respiratory tract by inhalation of airborne propagules
[6,7], similar to other systemic mycoses caused by the
dimorphic pathogenic fungi Blastomyces dermatitidis,
Coccidioides immitis (C. posadasii) and Histoplasma
capsulatum. Although the infection of some of these
Correspondence: Eduardo Bagagli, Departamento de Microbiologia
e Imunologia, Instituto de Biociencias, Faculdade de Medicina,
Universidade Estadual Paulista/UNESP, Rubiao Jr, s/n 18618-000,
CP 510, Botucatu, SP, Brazil. Tel.: '/55 14 3811 6058; Fax: '/55 14
3815 3744; E-mail: [email protected]
Received 25 July 2003; Accepted 27 November 2003
2004 ISHAM DOI: 10.1080/13693780310001656795
Medical Mycology December 2004, 42, 517/523
7/30/2019 13693780310001656795
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mycoses may be associated with extreme winds and
earthquakes, the prolonged periods of latency and the
lack of outbreaks of PCM do not allow correlating the
infection with sporadic climatic events.
Despite the continuous efforts by several research
groups, little is known about the habitat of P.
brasiliensis [3]. Some authors have suggested that the
fungus has its natural habitat in soil or in the vegetation
present in disease-endemic area [6,8]. However, the
fungus has been rarely isolated from soil and related
materials [9]. Frequent migration of the inhabitants
within the disease-endemic area, among other factors,
increases the difficulties in finding the fungus micro-
niche in nature [8].
Epidemiologic and ecologic studies on PCM have
shown that the disease is widely distributed throughout
an ecologically diverse continental area. Several
authors have pointed out some environment prefer-
ences where PCM is highly endemic, which are:
temperature between 17/248
C; mild winters; meanannual precipitation from 500 to 2500 mm; height
from 500 to 2000 m; proximity of water courses; clayey,
fertile and acid soils [2,6,10/14]. However, most of
previous works have been derived from descriptive
studies [10,12,14/17], others have been supported by
statistically oriented approaches, such as logistical
regression methods [18] and multivariate analyses [19]
or using armadillos as animal sentinels [20].
Due to the spatial character of this epidemiologic
and ecologic issue, fine scale studies are needed to help
to identify hot spots in the disease-endemic areas.
Remote sensing and Geographic Information Systems
(GIS) have been successfully applied to other epide-miologic problems, mainly to vector-borne diseases,
such as malaria [21,22], Rift Valley fever [23], Lyme
disease [24], African trypanosomiasis [25], and infec-
tious diseases such as coccidioidomycosis [26], among
others. Following this approach we present here a study
on ecologic correlates of PCM distribution in its
endemic region in Southeastern Brazil, through GIS
and spatial analyses. Although there are no control
measures that may be applied to prevent this disease
[27], ecologic correlates are important findings to
design epidemiologic risk maps. These maps could
then be used to increase awareness among clinicians,
tourists and the people living in rural areas where PCM
is endemic.
Material and methods
Human cases data and study area
Human PCM data corresponded to the cases seen in
the Dermatologic Sector of the University Hospital
(UH-UNESP), located in Botucatu County, Sao Paulo
State, from 1970 to 1999. Three surveillance measures
were calculated based on the 30 years of data: cases by
county of residence, cases by county per 10 000
inhabitants and prevalence density (cases by county
per area of the county). This approach favors the
spatial distribution of occurrences and the distribution
of the etiologic agent in the environment [4,28]. Average
population density (people/km2) by county for the
period was also calculated based on census data
produced by the Brazilian Institute of Geography and
Statistics and the Foundation for Data Analyses
System of Sao Paulo State. The study area was based
on patients residence (Fig. 1), which largely coincides
with the Botucatu hyper-endemic area of PCM, pre-
viously described [14].
Spatial data
Data were prepared taking into consideration the
boundaries of the 44 studied counties as indicated in
the 1:250 000 scale topographic maps of the region [29].
Elevation data were digitized at the same scale.
Geologic, geomorphologic, and soils data [30/32]
were digitized at a scale of 1:500 000. Carta Linx
software was used to digitize and edit the spatial
databases, which were processed and analyzed using
IDRISI32 GIS software [33].
From the digitized elevation data, it was possible to
interpolate height values and generate a Digital Eleva-
tion Model (DEM) for the study area. Triangulated
Irregular Networks (TIN) modeling was performed to
create the DEM [33].Daily rainfall statistics were obtained by using the
data from 68 rain gauges that was recorded from 1970
through 1999, georeferenced and submitted to geosta-
tistical analyses [34]. Precipitation data were interpo-
lated through ordinary kriging and three maps
subsequently derived: average annual precipitation,
mean precipitation in the wet season (October through
March) and mean precipitation in the dry season (April
through September). Temperature data were calculated
for the same 68 stations using a regression equation [35]
that related elevation, latitude and temperature for Sao
Paulo State.
Results
From 1970 through 1999, 377 confirmed human cases
of PCM were registered at the Department of Derma-
tology of UH-UNESP. Among those, 159 of the cases
came from 33 of the 44 (75%) counties of residence in
the study area. Over the 30 years of data, the
2004 ISHAM, Medical Mycology, 42, 517/523
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distribution of PCM cases by county varied from
0 to 32. Mean incidence rate was 4.27 per 10 000
inhabitants, varying from 0 to 57.9 in each of the 44
counties in the study area. Mean prevalence density
was 8.26 cases/1000 km2, varying from 0 to 41.32 in
each of the 44 counties in the study area. Population
density ranged from 4.92 to 176.28 inhabitants/km2 in
each of the 44 counties in the study area.
Spatial statistics can measure the likelihood that anapparent pattern was produced merely by chance.
Spatial autocorrelation allows for hypotheses testing
about pattern values of a single variable at different
locations [36]. Morans I [37] and Gearys C [38] were
applied to measure spatial autocorrelation [39]. Mor-
ans I ranges from (/1 to '/1, and equals 0 when there
is no spatial autocorrelation (no effect of distance on
the distribution of a variable). Gearys C varies from
0 to 2 and when it equals 1, indicates random
distribution of values. Interpretation of Morans I
and Gearys C, reveal a strong positive autocorrelation
when I/0 and 0B/CB/1 and, a strong negative
autocorrelation when IB/0 and C/1. Standardized
normal variables, Z (I) and Z (C), were derived from
the Morans I and the Gearys C values for each
variable considered to evaluate statistical significance.For a two-tailed test, the critical values are 9/z0.0250/
9/1.96, at the 5% significance level.
Spatial autocorrelation analyses indicated significant
spatial clustering of counties according to population
density, cases by county of residence, cases per 10 000
inhabitants and prevalence density (Table 1).
Surveillance measures indicated spatial autocorrela-
Fig. 1 Prevalence density of PCM by county (cases/thousand km2) in the study area.
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Distribution of paracoccidioidomycosis 519
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tion, which makes it appropriate to analyze environ-
mental patterns that appear to overlay the distribution
of PCM.
By means of Pearsons r correlation, prevalence
density by county was associated with the percent
area of each of the environmental variables by county
over the 44 counties.
Geologic and soil features, as well as precipitation
were found to be significant environmental correlates.
The results are shown in Table 2 and below.The Mesozoic basaltic rocks of the Serra Geral
Formation were the only geologic unit to show a
significant correlation with prevalence density. In fact,
this was the highest correlation found amongst any
environmental variable (r0/0.63; PB/0.0001).
Associations with soil types were calculated between
prevalence density and soil order and suborder, with
nine and 57 types, respectively. From the nine main
types of soils in the study area, four different types
showed statistical correlations. Because of their exten-
sions, two of these types are noteworthy. Calculating all
Latosol data (LV and LVA types) r0/0.40 (PB/0.003).
Podzolic soils together (PV and PVA types) did not
change the negative correlation (r0/(/0.48;
PB/0.0003).
Soil texture was also analyzed. The 57 soil types were
grouped according to their texture, based on percent
clay content, as follow: sand (B/15% clay), medium
(15/35% clay), clay (/35% clay). Sand and clay soil
textures correlated statistically with prevalence density
(r0/(/0.40, PB/0.003; r0/0.34, PB/0.02, respec-
tively). Adding medium and clay soil textures, thecorrelation increased to r0/0.40 (PB/0.003).
Statistical analyses of precipitation indexes showed
Table 1 Spatial autocorrelation for PCM distribution, measured by
Morans I and Gearys C coefficients and their derived standard
normal variables, Z(I) and Z(C)
Variable /I /Z (I) /C /Z (C)
Population density 0.53 7.25 0.46 7.01
Ca ses by county of residence 0 .69 9.3 6 0.3 7 8.0 4
Ca ses per 1 0 00 0 inhabitants 0 .48 6.7 3 0.5 1 5.9 1
Prevalence density 0.71 9.6 0.28 9.33
Table 2 Significant statistic correlates of PCM prevalence density by county with percent area of soil (order, suborder and texture),
precipitation, soil texture plus precipitation and geologic types by county (n0/44)
r P-value
Soil order
Red Latosol (LV) 0.40 B/0.003
Red-Yellow Podzolic (PVA) (/0.48 B/0.0003
Lithosol (RL) (/0.28 B/0.05
Red Nitosol (NV) 0.29 B/0.04
Percent area of each soil suborder by county
Red Latosol (LV1) 0.62 B/0.0000008Red Nitosol (NV1) 0.31 B/0.03
Red-Yellow Podzolic (PVA10) (/0.29 B/0.04
Red Nitosol (NV3) 0.35 B/0.02
Red-Yellow Latosol (LVA52) 0.34 B/0.02
Soil texture
Sand (B/15% clay) (/0.40 B/0.003
Clay (/35% clay) 0.34 B/0.02
Medium'/clay (/15% clay) 0.40 B/0.003
Precipitation
Mean annual precipitation (1300/1400 mm) (/0.40 B/0.01
Mean annual precipitation (1500/1600 mm) 0.46 B/0.001
Mean precipitation in the wet season (940/1040 mm) (/0.44 B/0.01
Mea n precipitation in the wet sea son (abov e 10 40 mm) 0 .40 B/0.004
Soil texture'/precipitationSand,B/1400 mm (/0.29 B/0.04
Sand,/1400 mm (/0.27 B/0.05
Medium,B/1500 mm (/0.28 B/0.05
Medium,/1500 mm 0.44 B/0.002
Clay,/1400 mm 0.61 B/0.000002
Medium'/clay,/1400 mm 0.53 B/0.00006
Geology
Mesozoic ba sa ltic rocks of the Serra Gera l Formation 0 .63 B/0.0001
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that mean annual precipitation above 1400 mm and, in
the wet season, a minimum mean precipitation of 1040
mm, increased prevalence density rates. In the study
area, median temperature (from 19.3 to 22.58C),
minimum temperature (from 13.1 to 15.98C) and
maximum temperature (from 25.4 to 29.18C) did not
reveal significant association with prevalence density,
nor did height (varying from 450 to 950 m above sea
level), present significant correlation.
Discussion
Our analyses depended mainly on patients with PCM
admitted to the Dermatologic Sector of the UH-
UNESP, which treats about half of the cases seen in
this center. We assume that the data from this center
were representative of all areas within the region for the
following reasons: (1) this is the oldest and the most
traditional center for PCM diagnosis in the westernportion of the state. The disease is not easily diagnosed,
requiring specialized clinicians and laboratory support
rarely found in other centers in the study area; (2) only
recently has the disease been diagnosed in other centers
and even in these cases, patients are sent to the UH-
UNESP for treatment; and (3) finally, the center offers
its services free of charge.
Considering the difficulties found when attempting
to identify areas where infection with P. brasiliensis
occurs, current surveillance measures based on cases by
county of residence is not sufficiently precise to identify
risk areas of infection. On the other hand, prevalencedensity offered the best spatial clustering, measured by
spatial autocorrelation, and was the unique surveillance
measure that had significant ecologic correlates. As
people are not equally exposed to risk due to the great
variability in rural populations over the counties, and
the infection is not contagious, this approach, standar-
dizing by county area, emphasizes the location of the
occurrences independently of the size of the popula-
tion. As spatial autocorrelation exists, PCM distribu-
tion does not present a random pattern in the study
area. This finding constitutes strong evidence in favor
of some social or ecologic correlates explaining the
presence ofP. brasiliensis in the area. The results of thisstudy show that there are important relationships
among human PCM distribution and population
density, basaltic rocks, Latosol soils and precipitation.
Prevalence density is higher in areas with a larger
percentage of Latosol soils. This can be explained by
Fig. 2 Soil texture, mean annual precipitation and prevalence density by county (cases/thousand km2).
2004 ISHAM, Medical Mycology, 42, 517/523
Distribution of paracoccidioidomycosis 521
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the fact that these soils, which in general present more
than 35% clay and poor capacity for drainage, retain
moisture. The four Latosol sub-order soils (LV1, NV1,
NV3 and LVA52), which have clay texture and derived
from the basaltic rocks of the Serra Geral Formation,
also correlated positively. High incidence of PCM was
also observed in clayey fertile soils derived from the
Serra Geral Formation cropping out in the Rio Grande
do Sul State, Southern Brazil [12].
Precipitation seems to play a role in the disease-
endemic regions, although its seasonality and geo-
graphic extent have yet not been properly studied.
Mean annual precipitation range previously defined
(500/2500 mm) is too wide to contribute to develop
risk models. Results indicate that precipitation distri-
bution alone cannot completely explain the distribution
of PCM in the study area. When soil texture and
precipitation were analyzed together, the correlation
increased to r0/0.61 (PB/0.000002) for fine-textured
soils (/35% clay) with mean annual precipitationabove 1400 mm. On the other hand, precipitation did
not increase the association with coarse-textured soils
(B/15% clay), which presented r0/(/0.29 (PB/0.04)
for precipitation below 1400 mm and r0/(/0.27
(PB/0.05) when precipitation was above 1400 mm.
Actually, PCM distribution seems to be related to soil-
water interactions, more specifically, to soil surface
storage of water. Riparian forests and vegetation near
watercourses have been strongly associated with in-
fected armadillos [20] and even with human infection
[19]. In the riparian zone, water table is high, favoring
greater soil water availability. The soil water content
varies with particle size, local drainage, and topo-graphic and climatic characteristics. Available soil
water is dependant on precipitation, evaporation rate
and soil characteristics. For the same climatic condi-
tions, fine-textured soils retain more water than coarse-
textured soils due to the greater superficial area by
mass unit of clay particles. Soil water availability in
clayey soils is 1.56 greater than in sand soils [40],
ranging from 75 mm/m of soil profile to 117 mm/m.
At tropical latitudes, annual temperatures are less
variable than in temperate areas and tend to exert a
lesser effect on the development and limits of tolerance
of a species than local hydrologic conditions [41].
Therefore, as temperature did not vary significantly in
the study area, soil water-holding capacity and
precipitation can partially explain PCM distribution
(Fig. 2). Obviously, evaporation and evapotranspira-
tion should also be considered to precisely define the
water budget. In this case, land use has to be carefully
analyzed. Through transpiration, plants have an active
role in soil water use thus strongly conditioning the
water balance [42]. Other conditions that reduce
vegetative cover and compact the soil surface, such as
the overgrazed pasture condition, cause infiltration to
diminish [43] and, consequently, to decrease soil water
availability.
Ecologic correlates of PCM distribution indicate that
moisture availability should be further investigated,
since climate correlates have been extremely useful to
develop models of suitable conditions to parasite
habitats [44].
Prevalence density is higher in fertile clayey soils
where intense agricultural activities generate great
exposure to aerosols. Due to the small size of the clay
particles, these soils are easily spread by the wind. On
the other hand, poor soils are likely to be destined for
grazing activities, being less aerated. It is still premature
to conclude either that the fungus prefers fine-textured
soils or that the high prevalence is associated with
intense agricultural practices. Unfortunately, we still do
not have a clear strategy to prevent future infections.An analyses including land use as a spatial variable
would contribute to the understanding of the relation-
ship among prevalence density, fungus autoecology and
environmental risk factors for PCM.
Acknowledgements
The State of Sao Paulo Research Foundation (FA-
PESP), grants 02/04489-0 (to LBS) and 02/00466-5 (to
EB) supported this research. We thank Celia R. L.
Zimback for her comments, Angela Restrepo for
critically reviewing the manuscript and the two anon-
ymous reviewers for their relevant suggestions.
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