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Structure and Dynamics of Biomembranes Hiroshi Noguchi Institute for Solid State Physics, University of Tokyo, Kashiwa, Chiba 277-8581, Japan [email protected] H. Noguchi, EPL 108, 48001 (2014); H. Noguchi, J. Chem. Phys. 143, 243109 (2015); H. Noguchi, Sci. Rep. 6, 20935 (2016). Tubulation by Banana-shaped Proteins BAR superfamily protein C side r rod =1 C side r rod = -1 Tubulation dynamics is changed by the sign of side curvature C side . 0 0.5 1 0 4000 8000 <z cl 2 > 1/2 /r rod t/τ (c) C side r rod = -1 0 1 0 0.5 1 <N cl >/N rod (b) C side r rod = -1 0 1 3 4 -1 0 1 C rod r rod C side r rod (a) iso part net 1/C rod -1/C side curved rod percolated network is transiently formed. Dynamics of Red Blood Cells in Flows Polymer-Grafting Induced Micro-Domain Octopus-like Micelles Rolled lamella Induced by Shear Flow synclonization of tumbling and tank-treading rotation Flow-induced ordered structures H. Noguchi, Phys. Rev. E 80, 021902 (2009); J. Phys. Soc. Jpn. 79, 024801 (2010); Phys. Rev. E 81, 056319 (2010); Phys. Rev. E 81, 061920 (2010). capillary flow shear flow viscosity ratio shear rate J. Liam McWhirter, H. Noguchi, and G. Gompper, PNAS 106, 6039 (2009); Soft Matter 7, 10967 (2011); New J. Phys. 14, 085026 (2012);. cryo-TEM image of binary mixture f diblock copolymers Jain et al. Macromol. 37, 1511 (2004.). Local curvature difference induces phase separation. Red molecules form rim and worm arms. Red worms is directly connected to blue disk. Phase diagram spontaneous curvature repulsion between different molecules Octopus-like micelles are formed at very low CMC. Two types of connection structures are found. Shear flow unstabilizes lamellar structure leading to rolled lamella, which scattering pattern agrees with intermediate state into onion phase in experiment. Polymer grafting can stabilize micro-domains, since polymer have larger entropy at domain boundary. H. Noguchi, Soft Matter 8, 3146 (2012). low shear rate high shear rate rolling Sites binding three or more neighboring membranes form a large cluster to gain entropy of membrane fluctuation. H. Noguchi, EPL 102, 68001 (2013). H. Shiba, H. Noguchi, and G. Gompper, J. Chem. Phys. 139, 014702 (2013). H. Wu, H. Shiba, and H. Noguchi, Soft Matter 9, 9907 (2013). Entropy-driven Assembly Yanagisawa et al, Soft Matter 8, 488 (2012). mixed state micro-domain polymer density increases reduction of interaction of two types of particles

Hiroshi Noguchinoguchi.issp.u-tokyo.ac.jp/nog2016.pdf · H. Noguchi, Soft Matter 8, 3146 (2012). low shear rate high shear rate rolling Sites binding three or more neighboring membranes

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Page 1: Hiroshi Noguchinoguchi.issp.u-tokyo.ac.jp/nog2016.pdf · H. Noguchi, Soft Matter 8, 3146 (2012). low shear rate high shear rate rolling Sites binding three or more neighboring membranes

Structure and Dynamics of BiomembranesHiroshi Noguchi

Institute for Solid State Physics, University of Tokyo, Kashiwa, Chiba 277-8581, [email protected]

H. Noguchi, EPL 108, 48001 (2014); H. Noguchi, J. Chem. Phys. 143, 243109 (2015);H. Noguchi, Sci. Rep. 6, 20935 (2016).

Tubulation by Banana-shaped ProteinsBAR superfamily protein

Csiderrod= 1 Csiderrod= -1

Tubulation dynamics ischanged by the sign ofside curvature Cside.

0

0.5

1

0 4000 8000

<zcl

2 >1/2 /r r

od

t/τ

(c)Csiderrod =

-1

0

1

0

0.5

1

<Ncl

>/N

rod

(b)Csiderrod = -1

0

1

3

4

-1 0 1

Cro

dr ro

d

Csiderrod

(a)iso

part

net

1/Crod

-1/Cside

curved rod

percolated network istransiently formed.

Dynamics of Red Blood Cells in Flows

Polymer-Grafting Induced Micro-Domain

Octopus-like Micelles

Rolled lamella Induced by Shear Flow

synclonizationof tumbling andtank-treadingrotation

Flow-induced ordered structures

H. Noguchi, Phys. Rev. E 80, 021902 (2009); J. Phys. Soc. Jpn. 79, 024801 (2010);Phys. Rev. E 81, 056319 (2010); Phys. Rev. E 81, 061920 (2010).

capillary flow

shear flow

viscosity ratio

shea

rrat

e

J. Liam McWhirter, H. Noguchi, and G. Gompper, PNAS 106, 6039 (2009);Soft Matter 7, 10967 (2011); New J. Phys. 14, 085026 (2012);.

cryo-TEM image of binarymixture f diblock copolymersJain et al. Macromol. 37, 1511(2004.).Local curvature difference

induces phase separation.

Red molecules formrim and worm arms.

Red worms is directlyconnected to blue disk.

Phase diagram

spon

tane

ous

curv

atur

e

repulsion between different molecules

Octopus-like micelles are formed at very low CMC.Two types of connection structures are found.

Shear flow unstabilizes lamellar structure leading torolled lamella, which scattering pattern agrees withintermediate state into onion phase in experiment.

Polymer grafting can stabilize micro-domains, sincepolymer have larger entropy at domain boundary.

H. Noguchi, Soft Matter 8, 3146 (2012).

low shear rate high shear rate

rolling

Sites binding three or moreneighboring membranes forma large cluster to gain entropyof membrane fluctuation.

H. Noguchi, EPL 102, 68001 (2013).

H. Shiba, H. Noguchi, and G. Gompper, J. Chem. Phys. 139, 014702 (2013).

H. Wu, H. Shiba, and H. Noguchi, Soft Matter 9, 9907 (2013).

Entropy-driven Assembly

Yanagisawa et al, Soft Matter 8, 488 (2012).

mixed state micro-domain

polymerdensity

increasesredu

ctio

nof

inte

ract

ion

oftw

oty

pes

ofpa

rticl

es