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SCIENCEFOUNDATIONINCHINA Vol26No12018 55
OpenScienceID (OSID)
RegulationofcarotenoidbiosynthesisinfruitsZHANGDanDan(张丹丹)1ZENGQing(曾琴)12JIANGGuoXiang(蒋国祥)1
JIANGYueMing(蒋跃明)1 amp DUANXueWu(段学武)1lowast
1SouthChinaBotanicalGardenChineseAcademyofSciencesGuangzhou510650China2UniversityofChineseAcademyofSciencesBeijing100049China
ReceivedDecember212017acceptedJanuary172018
lowast Correspondingauthor(Emailxwduanscbgaccn+862037252960)
Abstract CarotenoidsareaclassofisoprenoidswidelydistributedinplantsalgaefungiandbacteriaCarotenoidsareessentialcomponentsforhumandietprovidinghealthpromotingandnutritionalbenefitsFruitsarethemajorsourceofcarotenoidsforhumanconsumptionCarotenoidbiosynthesisandregulationinfruitsareofgreatimportancefordevelopmentandmaintenanceofnutritionalqualityInrecentyearssignificantprogresshasbeen madeinunderstandingthebiosynthesisandregulationofcarotenoidsintomatoandother widelyconsumedfruitsCarotenoidaccumulationinfruitsishighlyregulatedbydevelopmentalprogramsenvironmentalfactorsandmetabolicsignalsatmultiplelevelsInthisreviewwehighlightrecentinsightsintotranscriptional(transcriptionfactoralternativeRNAsplicingepigeneticmodificationmiRNA)postGtranscriptionalandhormoneregulationofcarotenoidbiosynthesisinplantsespeciallyinfruits
Keywords CarotenoidbiosynthesisFruitTranscriptionfactorsPosttranscriptionalregulationdoi1016262jcnki1005G0841201801005
1 Introduction
Carotenoidsareaclassof40Gcarbonisoprenoidswith>750memberswidelydistributedinplantsalgaefungiandbacteria[1]CarotenoidsconstitutethemainpigmentsinfruitsresultinginthetypicalyelloworangeandredcolorcharacteristicsCarotenoidsareinvolvedinthegrowthdevelopmentandresponsesofplantsto the environmental stimuliIn green photosynthetic tissuescarotenoids participate inphotosystemassemblylightGharvestingandphotoprotection[2]InnonGgreentissuescarotenoidsconferplantsvividcolortoattractpollinatorsandseeddispersersCarotenoidsalsoserveasprecursorstothebiosynthesisofphytohormonesabscisicacids(ABA)andstrigolactones(SLs)whicharekeyregulatorsofdevelopmentandstressresponseinplants[3]MoreimportantlycarotenoidsareessentialcomponentsforhumandietCarotenoidsprovidehealthbenefitstohumansasprovitaminAandnaturalantioxidant[4]Additionallycarotenoidsenhancetheimmunefunctionavoidsunburnreactionsanddelayagingandtheonsetofcertaintypesofcancer[5]
Consideringtheimportanceofcarotenoidsin plantphysiologicalprocessesandin human healthsignificantprogresshasbeen madeinunderstandingcarotenoid metabolism andregulationinplantsCurrentlythecarotenoidbiosynthesispathwayinplantshasbeen wellilluminatedThe mechanismunderlyingtheregulationofgeneorproteinsinthecarotenoidbiosynthesispathwayhasbeengraduallyunveiledInfruitsgreatadvancesincarotenoidbiosynthesisandregulationhavealsobeenmadeintomatoasamodelfruitaswellasotherfruitsHoweverincontrasttogreenplanttissuesfruitscontainmore
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complexcarotenoidcompositionsimplyingthatvariousandmultifacetedregulatorymechanismsmayexistinfruits[6]Thereviewfocusesonrecentunderstandingoftheregulationofcarotenoidbiosynthesisincludingtranscriptionalposttranscriptionalandhormoneregulationinplantsespeciallyinfruits
2 Diversityofcarotenoidsinfruits
Fruitsarethe majorsourceofcarotenoidsforpromotinghumanhealthandprovidingnutritionalbenefitsAlargenumberoffruitsaccumulatecarotenoidsCarotenoidcontentandcompositionvarygreatlyamongdifferentspeciesoffruitsBasedonthetotalcarotenoidcontentsfruitscanbeclassifiedintofourgroups[7](1)low (<1μgg-1freshweight(fw))suchasstrawberry[8](2)moderate(1mdash5μgg-1fw)suchaswhiteGfleshpeach[9](3)high(5mdash20μgg-1fw)suchasyellowpepper[10]and(4)veryhigh(>20μgg-1fw)suchasredGfleshsweetorange[11]InadditiontogeneticvariationdevelopmentalstageandtissuespecificitygreatlyinfluencecarotenoidcompositionsandcontentsinfruitsAtthegreenstageoffruitscarotenoidsare maskedbychlorophyllsandthepredominantcarotenoidisluteinfollowedbyβGcaroteneviolaxanthinandneoxanthin [7]Thischaracterisverycommon among different species offruits When ripeningremarkable differencesin carotenoidcompositionsandcontentsareexhibitedamongdifferentspeciesevendifferentcultivarsortissueswithinthesamespeciesMostoftenmorecarotenoidsaccumulateinpeeltissuesthaninpulptissues[12]Table1summarizestotalcarotenoidcontentsandthemajorcarotenoidspresentinediblepartsofthemostwidelyconsumedfruits
Table1 Carotenoidsaccumulationinediblepartsofthemostwidelyconsumedfruits(ripe)worldwide1)
Fruitspecies Totalcarotenoidcontent Majorcarotenoid References
Apple 9mdash24μggdw Xanthophyll [13]
Banana(ripe) 16mdash105μggfw βGCaronteneαGCarontene [14]
Grape 15mdash3μggfw LuteinβGCarontene [15]
Citrus(redfleshGrapefruit) 13mdash74μggfw βGCaronteneLycopenelutein [16]
Citrus(yellowfleshgrapefruit) 12mdash60μggfw βGCaronteneluteinZeaxanthinβGCryptoxanthin [16]
Citrus(whitefleshgrapefruit) >2μggfw PhytoeneViolaxanthinZeaxanthin [17]
Citrus(mandarin) >25μggfw βGCryptoxanthinPhytoeneβGCaronteneζGCaronteneViolaxanthin
Citrus(redGfleshsweetorange) 45mdash107μggfw Phytoenephytofluenelycopene9GcisGViolaxanthin [1019]
Citrus(yellowGfleshsweetorange) 2mdash10μggfw 9GcisGViolaxanthinantheraxanthin [1019]
Kiwifruit >30μggfw βGCaronteneLutein [20]
Mango >190μggfw βGCaronteneViolaxanthinLutein [21]
Melon(orangeflesh) 550μggdw βGCaronteneβGcryptoxanthin [22]
Papaya(yellowflesh) 336μggfw βGCryptoxanthinβGCarontene [23]
Papaya(redflesh) 592μggfw LycopeneβGCryptoxanthinζGCaronteneβGCarontene [23]
Peach(yellowflesh) 10mdash12μggfw AntheraxanthinLuteoxanthinZeaxanthin [9]
Peach(whiteflesh) <2μggfw ViolaxanthinLuteinZeaxanthin [9]
Pepper(red) 180mdash1100μggdw CapsanthinβGCryptoxanthinZeaxanthinβGCarontene [11]
Pepper(yellow) 12mdash20μggfw LuteinβGCarontene [11]
Strawberry <03μggfw βGCaronteneLutein [8]
Tomato 5mdash135μggfw LycopeneβGCarontenePhytoenePhytofluene [24]
Watermelon(redGflesh) 30mdash70μggfw Lycopene [25]
Watermelon(yellowGflesh) 5μggfw ViolaxanthinLutein [2526]
1)fwindicatesfreshweightdwindicatesdryweight
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CitrusisoneofthemosteconomicallyimportantediblefruitsworldwidewiththemostdiversecarotenoidcompositionMostcultivatedcitrusesarenaturalorartificialhybridsoffourcoreancestralspeciescitronpummelomandarine and papeda The commercially important cultivated citrusinclude orangegrapefruitmandarinandlemonCarotenoidaccumulationvariesgreatlyin differentcitrusspeciesMandarinand orangeaccumulate primarily βGcryptoxanthin and violaxanthinwhile grapefruitandpummeloarerichinphytoenephytoflueneandlycopene[17182728]Inadditionlemonandlimecontainlowlevelsofcarotenoids[18]
TomatohasbeenwidelyusedasamodelfruittoresearchcarotenoidmetabolismTomatofruitdisplaysdiversecolorvariationwhichisattributedbythedifferentialcarotenoidaccumulationRedtomatomainlycontainslycopeneaccountingforupto90ofthetotalcarotenoids[24]SomemutanttomatofruitswithdiversecolorsarecharacterizedbyabnormalcarotenoidbiosynthesisForexampleorangetmutant[29]orangeredDeltamutant[30]andorangeBeltamutantfruit[31]accumulateprimarilyproGlycopeneδGcaroteneandβGcarotenerespectively
PapayaisanimportantcommercialfruitcultivatedintropicalandsubtropicalareasandisrichincarotenoidThecompositionsofcarotenoidinpapayadeterminethefruitcolorYellowGfleshedpapayavarietyaccumulatesmainlyβGcryptoxanthinandβGcarotenewhileredGfleshedcultivarmainlylycopene[23]
SimilartopapayadifferentcarotenoidcompositionsgivepepperfruitdiversecolorsRedpeppercontainsthehighestcarotenoidcontentamongallthecommonediblefruitswiththecontentofupto1100μgg-1fwThepredominantcarotenoidsinredpepperarecapsanthin[32]YellowpepperarerichinluteinandαGorβGcarotenewhileorangepeppercontainsprimarilycapsanthinluteinandorβGcarotene[3334]
Watermelonisoneofthe mostpopularfruitsinthe worldFleshcoloristheimportanttraitofwatermelonCarotenoidsareresponsiblefordiversecolorsin watermelonfruit [25]RedGfleshedwatermelonsconsistedprimarilyoflycopenewithasmallamountofphytoenephytoflueneζGcaroteneαGcaroteneluteinzeaxanthinandviolaxanthin[25]whileviolaxanthinandluteinconstitutethemajorcarotenoidsinorangeGfleshedwatermelon[2526]
3 Biosynthesisofcarotenoids
Inhigherplantscarotenoidsaresynthesizedinvarioustypesofplastidsincludingproplastidsetioplastschloroplastsamyloplastsandchromoplasts[35]ThecarontenoidbiosynthesispathwayhasbeenwellestablishedwhichinvolvesthreeimportantprocessesbiosynthesisofprecursorformationoflinearchaincarotenoidsandcyclizationoflycopeneThegenesandenzymesinvolvedintheseprocessesforplantsareillustratedinFigure1Alargenumberofgenesfromfruitsinrelationtocarotenoidbiosynthesisandregulationalsohavebeenclonedandcharacterized
Thebiosynthesisofcarotenoidsdependsonthesupplyoftwobasicbuildingblocksofcarotenoidsisopentenyldiphosphate(IPP)anddimethylallyldiphosphate(DMAPP)[6]whichareproducedvia2CGmethylGDGerythritolG4Gphosphate(MEP)pathwaySevenenzymesareinvolvedinMEPpathwayincluding1GdeoxyxyluloseG5Gphosphatesynthase(DXS)1GdexoyGDGxylulose5Gphosphatereductoisomerase(DXR)MEPcytidylyltransferase(MCT)4G(cytidine51049011Gdiphospho)G2GCGmethylGDGerythritol(CDPGME)kinase(CMK)2GCGmethylGDGerythritol24Gcyclodiphosphate (MECDP)synthase (MDS)(e)G4GhydroxyG3GmethylbutG2GenG1Gyldiphosphate(HMBPP)synthase(HDS)and HMBPPsynthasereductase (HDR)[36]ThefirststepinMEPpathwayisregulatedbyDXSarateGlimitingenzymeincarotenogensisTheoverexpressionofDXSenhancescarotenoidaccumulationin ArabidopsiswhilethemutationofDXSresultsinnocarotenoidaccumulation[37]AnotherkeyregulatorystepisHDRthelastenzymeinMEPpathwaywhichcatalyzestheproductionofIPP[38]IPPisisomerizedtoDMAPPviaIPPisomeraseIPPandDMAPPundergocondensationreactionsgeneratingthemajorcarotenoidprecursorgeranylgeranyldiphosphate (GGPP)Thereactionsarecatalyzed byisopentenyldiphosphateisomerase (IPI)and
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Figure1 BiosynthesisandregulationofcarotenoidsinplantsThegreyrectanglesrepresentthesubstratesandmetabolitesinthecarotenoid biosynthesispathwayTheblueellipsesrepresenttheenzymesandtheirgenesinvolvedincarotenoidbiosynthesisThegreenellipsesrepresenttranscriptionfactorsregulatingcarotenoidbiosynthesisTheredellipsesrepresentproteinsinvolvedintheposttranscriptionalregulationofcarotenoidbiosynthesisTheyellowellipsesrepresenttheproteinsinvolvedinepigeneticmodificationofcarotenoidbiosynthesisThepurpleellipsesrepresentmiRNAinvolvedintheregulationofcarotenoidbiosynthesisBCHnonGhemeβGcarotenehydroxylaseCDPGME4G(cytidine51049011Gdiphospho)G2GCGmethylGDGerythritolCDPGME2P2GphosphoG4G(cytidine51049011Gdiphospho)G2GCGmethylGDGerythritolCMKCDPGMEkinaseCRTISOcarotenoidisomerase CYP97A and CYP97Ccytochrome P450Gtype monooxygenase 97C DMAPPdimethylallyldiphosphateDXPdeoxyGDGxylulose5GphosphateDXR1GdexoyGDGxylulose5GphosphatereductoisomeraseDXS1GdeoxyxyluloseG5GphosphatesynthaseG3Pglyceraldehyde3GphosphateGGPPgeranylgeranyldiphosphateGGPPSGGPPsynthaseHDRHMBPPreductaseHDSHMBPPsynthaseHMBPP(e)G4GhydroxyG3GmethylbutG2GenG1GyldiphosphateIPIisopentenyldiphosphateisomeraseIPPisopentenyldiphosphateLCYBlycopeneβGcyclaseLCYElycopeneεGcyclaseMCTMEPcytidylyltransferaseMDSMECDPsynthaseMECDP2CGmethylGDGerythritol24GcyclodiphosphateMEP2CGmethylGDGerythritolG4Gphosphate NSY Neoxanthin synthasePDSphytoene desaturasePSYphytoenesynthaseVDEviolaxanthindeGepoxidaseZDSζGcarotenedesaturaseZEPzeaxanthinepoxidaseZGISOζGcaroteneisomerase
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geranylgeranyldiphosphate(GGPP)synthase(GGPPS)[39]ThecondensationoftwoGGPPmoleculescatalyzedbyphytoenesynthase(PSY)formsuncolored15Gcis
phytoenethefirstcarotenoidproductThisstepisregardedasthemostimportantregulatorystepincarotenoidbiosynthesis[39]TomatocontainsthreePSYgenesPSY1PSY2andPSY3whichexhibittissueGspecificexpressionmainlyinfruitinpetalandinrootrespectivelyDuringtomatoripeningtheaccumulationofcarotenoidcorrelateswiththeexpressionofPSY1 [4041]TransgenictomatobyantisenseinhibitionofPSY1producesonly3ofthecarotenoidinwildtypewildtypefruit[42]SimilarresultsregardingtherelationshipbetweenupregulatedexpressionofPSYgenesandincreasedcarotenoidaccumulationhavebeenreportedinalargenumberoffruitssuchascitrus[43]pepper[34]persimmon[44]loquat[12]watermelon [25]andbanana[45]Uncoloredphytoenethenundergoesaseriesofdesaturationandisomerizationreactionsto generateredGcolored allGtransGlycopenethe predominatepigmentinredtomatoand watermelonfruitsThesereactionsaresequentiallycatalyzedbyphytoenedesaturase(PDS)ζGcarotenedesaturase(ZDS)ζGcaroteneisomerase(ZGISO)andcarotenoidisomerase(CRTISO)[39]
Downstreaminthecarotenoidbiosynthesispathwaythecyclizationoflycopeneislocatedatthebranchingpointofthepathwaywhichproduceaseriesofcarotene(Figure1)[6739]ThecyclizationoflycopeneinvolvestwoenzymeslycopeneβGcyclase(LCYB)andlycopeneεGcyclase(LCYE)LCYBcatalyzesatwoGstepreactiontoproduceβGcarotenewithtwoβGringsAεGringandaβGringaresequentiallyaddedtolycopeneformingαGcarotene(βεGcarotene)whichiscatalyzedbyLCYEandLCYBFollowingthecyclizationoflycopeneαGcaroteneandβGcarotenearesubjectedtohydroxylationandepoxidationformingaseriesofxanthophylls[6739]TheαGcaroteneissequentiallycatalyzedbytwohydroxylasesCYP97A and CYP97CgeneratingluteinthefinalproductofαGbranchincarotenoid biosynthesispathwayβGcaroteneundergoestwostepsofhydroxylationandtwostepsofepoxidationcatalyzedbyβGcarotenehydroxylase (BCH)andzeaxanthinepoxidase (ZEP)sequentiallyformingβGcryptoxanthinzeaxanthinantheraxanthinandviolaxanthin[6739]Theconversionofviolaxanthinintoneoxanthinbyneoxanthinsynthase(NXS)completesthecorebiosynthesispathway[46]
4 Transcriptionalregulationofcarotenoidbiosynthesis
41 TranscriptionfactorTranscriptionalregulationplaysavitalroleinfruitdevelopmentandripeningaswellasabioticstresses
ItiswellknownthattranscriptionfactorsareinvolvedintranscriptionregulationofstructureandfunctiongenesincarotenoidbiosynthesispathwayAlthoughthegenesinvolvedinthebiosynthesisofcarotenoidbiosynthesishavebeenidentifiedandcharacterizedfromvariousfruits(Figure1)onlyafewtranscriptionfactorshavebeendemonstratedtodirectlyregulatetheexpressionofthesefunctiongenesinthepathwayThetranscriptionalcontrolofcarotenoidaccumulationhasbeenmostlystudiedintomatoduringripeningThesetranscriptionfactorsinclude RINR2R3GMYBNACSGR1PIF1RAP22EIN3etcHowevermostofthesetranscriptionfactorsexertbroadeffectsonfruitripeningieethylenesynthesisfruitsofteningcolorformationaromaandflavorproductionandareunlikelytobespecificregulatorsofcarotenoidbiosynthesis
RIPENINGGINHIBITOR (RIN)isa memberoftranscriptionfactorfamilycontaining MADSGboxwhichplaysanessentialroleinfruitripeningasaglobalmasterregulator[47]MarteletalreportedthatRINinteractswithSlPSY1thespecificPSYgeneassociatedwithcarotenoidbiosynthesisintomato[48]FujisawaetalidentifiedanumberofRINGtargetedgenesincarotenoidbiosynthesispathwaybychromatinimmunoprecipitationcoupled with DNA microarrayanalysisandfoundthatRIN regulatescarotenoidaccumulationviapositivelyregulatingPSY1ZISOandCRTISOinadirectmanneraswellaspositivelycontrollingZDSandnegativelyregulatingLYCBandLYCEbyanindirecteffectintomatofruit[49]
VGmybmyeloblastosisviraloncogenehomolog(MYB)proteinsbelongtoalargefamilyoftranscriptionfactorsinplantsThemajorityofMYBareR2R3GMYBsubfamilywithtworepeatsinitsMYBdomain
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TheR2R3GMYBTFsplaykeyrolesinregulatingplantGspecificprocessesincludingprimaryandsecondarymetabolismgrowthanddevelopmentandresponsetoabioticandbioticstresses [50]IncitrusCrMYB68an R2R3GMYBtranscriptionalfactorcandirectlybindandnegativelyregulateCrBCH2resultinginthedelayinthetransformationofαGandβGcaroteneandtheinhibitionofpeeldeGgreeningincitrus[51]SimilarlySagawaetalidentifiedanR2R3GMYBtranscriptionfactorReducedCarotenoidPigmentation1(RCP1)whichpositivelyregulatescarotenoidbiosynthesisduringMimuluslewisiiflowerdevelopmentLossGofGfunctionmutationsinRCP1resultindownGregulationofallcarotenoidbiosyntheticgenesandreducecarotenoidcontentwhileoverexpressionofthisgeneinthercp1 mutantbackgroundrestorescarotenoidproduction[52]Thereforeinadditiontoregulatinganthocyanins[53]R2R3GMYBisalsoinvolvedintheregulationofcarotenoidbiosynthesisinfruits
NAMATAF12andCUC2 (NAC)transcriptionfactorsareoneofthelargestfamiliesofplantGspecifictranscription factors which areimplicated in plant growth and developmentflavonoidbiosynthesiswoodformationandstressresponses [54]TheroleofNACtranscriptionfactorsinregulatingfruitripeningandsenescencehasbeenreportedintomato[55]banana[56]andlitchi[54]IntomatoSlNAC1and SlNAC4 positivelyregulatetomatofruitripeningbutexhibitdifferentialcharacteristicsAntisensesuppression ofSlNAC1 resultsin delayed ethylene production andfruitripeningbuthigherlevelsofethylenebiosynthesisandaccumulationoftotalcarotenoidandlycopeneaccompaniedbyupGregulatedexpressionofgenesrelatedtolycopeneandethylenebiosynthesis [55]DifferentfromSlNAC1reducedexpressionofSlNAC4byRNAinterference(RNAi)intomatodelayedfruitripeningdecreasedethylenesynthesisandreducedcarotenoidsbyalteringcarotenoidpathwayflux[57]AdditionallyFuetalreportedthatpapayaCpNAC2actsasatranscriptionalactivatorofCpPDS24CpZDSCpLCYGeandCpCHYGb by directly bindingtotheirpromotersand promotestheirtranscription[58]
SomeothertranscriptionfactorshavealsobeenreportedtobeinvolvedinthetranscriptionalregulationofstructuregenesinthecarotenoidbiosynthesispathwayIntomatoSlSGR1aSTAYGGREENproteinphysicallyinteracts with PSY1 to suppress PSY1 expressionthus negatively regulatinglycopeneproductionduringfruitripening[59]PhytochromeGinteractingfactor1downGregulatetheaccumulationofcarotenoidbybindingtothepromoterofPSYandrepressingPSYexpressioninArabidopsisseedlings[60]SimilarlyAtPAP22amemberoftheAPETALA2 (AP2)ethyleneGresponsiveelementGbindingproteintranscriptionfactorfamilydirectlybinds withthepromotersofPSY andPDS toregulatecarotenoidbiosynthesisinArabidopsis [61]PapayaCpEIN3aanethyleneresponsivefactordirectlybindswiththepromotersofCpPDS4andCpCHYGbandpromotestheirtranscription[58]InadditionoverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor(CrbHLH1)intomatolowerslycopeneaccumulationanddownGregulatecarotenoidbiosyntheticgeneexpressionintomatofruit[62]EctopicexpressionofanArabidopsisBZR1G1Dtranscriptionfactorinbrassinosteroidsignalingenhancescarotenoidaccumulationandfruitqualityattributesintomato[63]42 Epigeneticmodification
EpigeneticmodificationincludingthemethylationofDNACpGislandsandthemodificationofhistonesthatassociatedwithDNAinchromosomesplayaveryimportantroleinregulatinggeneexpressionEpigeneticmodification possiblyisimplicatedinregulation ofcarotenoid biosynthesis (Figure1)Cazzonellietalreportedahistonemethyltransferaseenzyme(SET DOMAIN GROUP8SDG8)thatmethylateshistoneH3onLys4andor36(H3K4andH3K36)inArabidopsisthalianawhichisrequiredforexpressionofCRTISOgeneMutationofSDG8resultsindownGregulatedexpressionofCRTISOgeneimpairedlutein biosynthesis andincreased shoot branchingThis wasthefirstreportregardinginvolvementofepigeneticmodificationinregulationofcarotenoidbiosynthesis[64]43 AlternativeRNAsplicing
AlternativeRNAsplicingisanimportantregulationofgeneexpressioninhighereukaryotesRecentlyAlvarezetalfoundthatalternativesplicingofPSYisimplicatedinregulationofcarotenogenesisinArabidopsisArabidopsispredominantlypossessasinglePSYgenewithtwoalternativesplicevariants
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(ASV)inlength andintheexonintronretention oftheir51049011UTRsASV1 with along 51049011UTR(untranslatedregion)isinvolvedindevelopmentallyregulatedcarotenoidformationwhileASV2withashort51049011UTRispreferentiallyinduced whenanimmediateincreaseinthecarotenoidpathwayfluxisrequired[65]44 microRNAs
MicroRNAs(miRNAs)arekeyregulatorsofgeneexpressionineukaryotesandplayapivotalroleintheregulationofvariousbiologicalaswellas metabolicprocessesInterestinglyanartificialmaturemicroRNAs (amiRNAs)successfullytargetedthe PSY mRNA andreduced PSY mRNA levelinPhaeodactylumtricornutumwhichfurtherreducedthelevelsofcarotenoidsinthePtricornutumamiRNAknockdownlines[66]ItwasspeculatedthatmiRNApossiblyisinvolvedinthetranscriptionregulationofcarotenoidbiosynthesisinplants
5 PostGtranscriptionalregulationofcarotenoidsbiosynthesis
InadditiontotranscriptionregulationofstructuregenesinvolvedinthecarotenoidpathwayrecentstudieshaverevealedotherregulatorymechanismstocontrolbiosyntheticenzymelevelsandactivitiesinplantssuchaspostGtranscriptionalregulation (Figure1)Theseregulatory mechanismspossiblyarepresentduringfruitdevelopmentandripening
ORANGE(OR)isaplastidGlocalizedproteincarryingacysteineGrichzincfingerdomainPreviousstudiedshowedthatORpromotescarotenoidaccumulationincalliofrice[67]andsweetpotato [68]FurtherZhouetalfoundthatArabidopsisORandPSYphysicallyinteractwitheachotherinplastidsresultingin minimaleffecton expression ofPSY gene [69]Howeveroverexpression of AtORsignificantlyincreasedtheamountofenzymaticallyactivePSYwhereasanatoratorGlikedoublemutantexhibitsadramaticallyreducedPSYlevelTheresultrevealedanovelmechanismunderlyingregulationofcarotenoidbiosynthesisviaposttranscriptionalmodificationofPSYinplants[69]
Inanotherimportantliterature on postGtranscriptionalregulation Welsch et alreported thatdegradationmodificationofproteinincarotenoidbiosynthesispathwayisimplicatedinregulationofcarotenoidbiosynthesisClpproteasesystemthemostabundantandcomplexsolubleproteasesystemintheplastidwasshowntotargetPSYTheabsenceofCLPC1CLPP4andCLPR1G2enhancedthelevelsofactivePSYandseveralothercarotenogenicenzymes[70]ThereforeORproteincounterbalancesClpGmediatedproteolysisinmaintainingPSYproteinhomeostasis
Theauthors1049011researchteamalsodiscoveredanindirectlypostGtranscriptionalregulatorymechanismtoregulateexpressionofPSYgeneinbananafruitSulfoxidationofproteinsbyreactiveoxygenspeciescancauseconformationalalterationorfunctionalimpairmentswhichcouldbereversedby Metsulfoxidereductase(Msr)ItwasfoundthatCaM1isasubstrateofMaMsrA7anditssulforxidationisrepairedbyMaMsrA7MaHY5G1actingasatranscriptionalrepressorofMaPSY1MaPSY2andMaPSY3inbananafruitisa CaMGbindingproteinSulfoxidationregulationof MaCaM1 by MaMsrA7altersexpressionofMaPSY1MaPSY2andMaPSY3genesbymodifyingMaHY5G1transcriptionalactivity(nopublisheddata)
TwootherproteinsalsohavebeenreportedtoberelatedtoposttranscriptionalregulationofcarotenoidbiosynthesisSlSGR1atomatoSTAYGGREENproteinregulateslycopeneaccumulationduringtomatofruitripeningviadirectinteractionwithPSY1[59]AnotherexampleisthepostGtranslationalregulationofDXSJGproteinJ20 (chaperoneproteindnaJ20)interactsdirectlywithDXSregulatingDXSproteinlevelandactivitybyidentifyingunfoldedormisfolded(damaged)formsofDXSandtargetingthemtotheHsp70systemforproperfoldingundernormalconditionsordegradationuponstress[71]
6 Hormonalregulationofcarotenoidbiosynthesis
Fruitripeningisacomplexandgeneticallyprogrammedprocesswhichinvolvesaseriesoforganolepticphysiologicaland biochemical changesresulting in the development of edible quality [72]
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PhytohormonesplaycrucialrolesinfruitripeningwhichhasbeenshowntoaffectcarotenoidaccumulationinfruitsMajorprogressregardingtheinvolvementofphytohormonesinregulatingcarotenoidbiosynthesishasbeenachievedinfruits
Ethyleneplaysa centralrolein climactericfruitripeningTherole ofethylenein carotenoidaccumulationinclimactericfruitshasbeenwidelystudiedIntomatoethyleneinitiatesfruitripeningresultinginarapidcolorshiftfromgreentoredwithincreasedlycopeneaccumulationanddecreasedβGxanthophyllsandchlorophyllscontentsTheroleofethyleneinregulatingcarotenoidbiosynthesisduringtomatofruitripeninginvolvesacomplexregulatorynetworkoftranscriptionfactorsRINasamasterregulatorbindstothepromotersofgenesinvolvedinfruitripeningprocessesincludingcarotenoidbiosynthesis[484973]APETALA2a(AP2a)isamemberofAP2ERFsuperfamilywhichregulatestomatofruitripeningbyregulatingethylenebiosynthesisandsignalingRepressionofAP2abyRNAinterference (RNAi)resultsin decreasedlevels ofphytoeneandlycopenebut higherβGcaroteneaccumulationconsistentwithdownGregulatedexpressionofPDSCtRGb2andCtrlSOandupGregulatedexpressionofZEP1MoreoverseveralripeningGrelatedregulatorsRIPENINGGINHIBITOR (RIN)NONGRIPENING (NOR)andCOLORLESSNONGRIPENING (CNR)functionupstreamofAP2aandpositivelyregulateitsexpression[74]SlERF6anothermemberofAP2ERFsuperfamilyisanegativeregulatorofcarotenoidaccumulationReducedexpressionofSlERF6byRNAienhancedbothcarotenoidandethylenelevelsduringfruitripening[75]InadditionthreeothertranscriptionfactorsarerelatedtotheethylenepathwayincludingTAGL1FRUITFULL1and2whichhavebeenreportedtopositivelyregulatecarotenoidaccumulationduringtomatoripening[76mdash78]
Auxinisinvolvedincellexpansionanddivisiontissuedifferentiationorgandevelopmentandarangeofphysiologicalprocess[79]Recentlyincreasingevidencesshowthatauxinalsoplaysanimportantroleinregulatingfruitripening[80]TheleveloffreeIAA (themostabundantauxin)tendstodeclinepriortotheonsetoftomatofruitripening[81]AuxinnegativelycontrolscarotenoidaccumulationintomatofruitExogenousIAA treatmentsignificantlyreduceslycopeneaccumulationbutenhancesthelevelsofneoxanthinandviolaxanthinaccompaniedbydownGregulatedexpressionofPsy1Psy3PdsZisoandCrtisoandupGregulatedexpressionofβGLcy1andCrtrGβ1 [82]Howeverwhetherauxindirectlyregulatesthegenesincarotenoidpathwayremainsunknown
Abscisicacid (ABA)isa key hormoneinvolvedintuningresponsestoabioticstressesLittleinformationisavailableabouttheinvolvementofABAinregulatingcarotenoidaccumulationduringtomatofruitripeningABA hasbeenreportedto beimplicatedinfruitripeningandinfluencecarotenoidaccumulationintomato[83]andstrawberry[84]fruit
JAssuchasmethyljasmonicacidjasmonicacidandotherderivativesareplantendogenoushormones[85]JAsalsoplayimportantrolesinfruitripeningLietalreportedthatJAinduceethyleneproductionbyMdMYC2GmediatedandMdERF3GmediatedupregulationofMdACS1gene[86]Applicationofmethyljasmonate(MeJA)increasestheaccumulationofanthocyaninβGcarotenecontentsandseveralphenoliccompounds[87]LiuetalfurtherilluminatedtheroleofJAinregulatingcarotenoidaccumulationduringtomatofruitripeningwithJAGdeficientmutants(spr2anddef1)anda35∷prosystransgenicline(35∷prosyswithincreasedJAlevelsandconstitutiveJAsignaling)andfoundthatlycopeneaccumulationissignificantlyinhibitedinspr2anddef1fruitbutenhancedin35S∷prosysfruitaccompaniedbyasimilartrendofexpressionoflycopenebiosyntheticgenes[88]Inadditionethyleneproductionisdepressedinspr2anddef1fruitbutincreasedin35S∷prosysfruitMoreovertheexogenousapplicationofMeJAtoNeverripe (Nr)an ethyleneGinsensitive mutantresultsin enhancedlycopene accumulation andexpressionoflycopenebiosyntheticgenes [88]TheseresultsindicatedthatJA promoteslycopenebiosynthesisinamannerindependentofethylene
7 Futureresearchdirections
CarotenoidmetabolismandregulationhavebeenwidelyresearchedinplantsHoweverthecarotenoidG
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SCIENCEFOUNDATIONINCHINA Vol26No12018 63
relatedstudieshavebeenmostlyfocusedonmodelspeciessuchasArabidopsisandtomatoThemolecularmechanismsunderlyingcarotenoid metabolism andregulationin otherfruitspeciesarestillpoorlyunderstoodConsideringthediversityofcarotenoidsinfruitsitisnecessarytoinvestigatethenovelgenesandregulationmechanismsrelatedtocarotenoidbiosynthesisinplants
Carotenoid accumulation is cooperatively controlled at multiple levelsincluding developmentalprogramsenvironmentalfactorsand metabolicsignalsTranscriptionfactorsplayimportantroleinregulatingcarotenoidbiosynthesisHoweveronlyafewtranscriptionfactorsinvolvedincarotenoidbiosynthesisareidentifiedandtranscriptionregulationismainlyrelatedtoexpressionofPSYMoreovermostofthesetranscriptionfactorsexerttheirinfluencesviaregulatingfruitripeningnotspecificcarotenoidbiosynthesisGrelated genesTheinteracting partners oftranscriptionfactorsinvolvedincarotenoidmetabolicnetworkalsoremaintobeidentifiedPostGtranscriptionalregulationalternativeRNAsplicingepigeneticmodificationandmiRNAareofimportanceinplantgrowthanddevelopmentandresponsetoabioticstressHoweverlittleinformationregardingtheinvolvementofthesemechanismsinregulating carotenoid metabolism in planteven in Arabidopsisis available Application ofphytohormonescontributestoregulatecarotenoidcontentand maintainfruitqualityinagricultureandpostharvesttreatmentThemechanismunderlyingregulationofcarotenoidmetabolismbyphytohormonesespeciallycrossGtalkamongdifferentphytohormonesarestillfarfrombeingunderstoodInthefuturestudiesbetterunderstandingofcarotenoid metabolismandregulationinfruitswillnotonlyhaveanimportantimpactongeneticimprovementandpostharvesttreatmentbutalsowillstrengthenknowledgeofcarotenoidregulationinplants
Acknowledgements
ThisworkwassupportedbytheNationalNaturalScienceFoundationofChina(GrantNos3177204131322044and31501545)ScienceandTechnologyPlanningProjectofGuangdongProvince(GrantNo2015B090901058)ScienceandTechnologyPlanningProjectofGuangzhou (GrantNo201604020048)andTalentProgramofGuangdongProvince(No2014TX01N049)
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49mdash59[34]RodriguezGUribeLGuzmanIRajapakseWetalCarotenoidaccumulationinorangeGpigmentedCapsicumannuumfruitregulatedat
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[44]ZhaoDZhouCTaoJCarotenoidaccumulationandcarotenogenicgenesexpressionduringtwotypesofpersimmonfruit(DiospyroskakiL)developmentPlantMolecularBiologyReporter201129646mdash654
[45]MlalaziBWelschRNamanyaPetalIsolationandfunctionalcharacterisationofbananaphytoenesynthasegenesaspotentialcisgenesPlanta20122361585mdash1598
[46]NeumanHGalpazNCunningham FXetalThetomatomutationnxd1revealsagenenecessaryforneoxanthinbiosynthesisanddemonstratesthatviolaxanthinisasufficientprecursorforabscisicacidbiosynthesisPlantJournal20147880mdash93
[47]VrebalovJRuezinskyDPadmanabhanVetalA MADSGboxgenenecessaryforfruitripeningatthetomatoripeningGinhibitor(Rin)
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1568mdash1579[49]Fujisawa MNakanoTShimaYetalAlargeGscaleidentificationofdirecttargetsofthetomato MADSBoxtranscriptionfactor
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flowersNewPhytologist20162091049mdash1057[53]JaakolaLNewinsightsintotheregulationofanthocyaninbiosynthesisinfruitsTrendsinPlantScience201318477mdash482[54]JiangGYanHWuFetalLitchifruitLcNAC1isatargetofLcMYC2andregulatoroffruitsenescencethroughitsinteractionwith
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regulatoroffruitripeningandcarotenoidaccumulationPlantandCellPhysiology201455119mdash135[58]FuCCHanYCKuangJFetalPapayaCpEIN3aandCpNAC2cooperativelyregulatecarotenoidbiosynthesisrelatedgenesCpPDS2
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withSlPSY1duringripeningprocessesintomatoNewPhytologist2013198442mdash452[60]ToledoGOrtizGHuqERodriguezGConcepcionMDirectregulationofphytoenesynthasegeneexpressionandcarotenoidbiosynthesisby
phytochromeGinteractingfactorsProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica201010711626mdash
11631[61]WelschRMaassDVoegelTetalTranscriptionfactorRAP22anditsinteractingpartnerSINAT2Stableelementsinthe
carotenogenesisofArabidopsisleavesPlantPhysiology20071451073mdash1085[62]EndoTFujiiHSugiyamaAetalOverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor (CubHLH1)whichis
homologoustoArabidopsisactivationGtaggedbri1suppressor1interactingfactorgenesmodulatescarotenoidmetabolismintransgenictomatoPlantScience201624335mdash48
[63]LiuLJiaCZhang MetalEctopicexpressionofaBZR1G1DtranscriptionfactorinbrassinosteroidsignallingenhancescarotenoidaccumulationandfruitqualityattributesintomatoPlantBiotechnologyJournal201412105mdash115
[64]CazzonelliCICuttrissAJCossettoSBetalRegulationofcarotenoidcompositionandshootbranchinginarabidopsisbyachromatinmodifyinghistonemethyltransferaseSDG8PlantCell20092139mdash53
[65]AlvarezDVossBMaassDetalCarotenogenesisisregulatedby51049011UTRGmediatedtranslationofphytoenesynthasesplicevariantsPlantPhysiology20161722314mdash2326
[66]KaurSSpillaneCReductionincarotenoidlevelsinthemarinediatomPhaeodactylumtricornutum byartificialmicroRNAstargetedagainsttheendogenousphytoenesynthasegeneMarineBiotechnology2015171mdash7
[67]BaiCRiveraSMMedinaVetalAninvitrosystemfortherapidfunctionalcharacterizationofgenesinvolvedincarotenoidbiosynthesisandaccumulationPlantJournal201477464mdash475
[68]KimSHAhnYOAhnMJetalCloningandcharacterizationofanOrangegenethatincreasescarotenoidaccumulationandsaltstresstoleranceintransgenicsweetpotatoculturesPlantPhysiologyandBiochemistry201370445mdash454
[69]ZhouXWelschRYang YetalArabidopsisORproteinsarethemajorposttranscriptionalregulatorsofphytoenesynthaseincontrollingcarotenoidbiosynthesisProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica20151123558mdash
3563[70]WelschRZhouXYuanHetalClpproteaseandORdirectlycontroltheproteostasisofphytoenesynthasethecrucialenzymefor
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[71]PulidoPToledoGOrtizGPhillipsMAetalArabidopsisJGProteinJ20deliversthefirstenzymeoftheplastidialisoprenoidpathwaytoproteinqualitycontrolPlantCell2013254183mdash4194
[72]PrasannaVPrabhaTNTharanathanRNFruitripeningphenomenamdashAnoverviewCriticalReviewsinFoodScienceandNutrition
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immunoprecipitationanalysesPlanta20122351107mdash1122[74]KarlovaRRosinFMBusscherGLangeJetalTranscriptomeandmetaboliteprofilingshowthatAPETALA2aisamajorregulatorof
tomatofruitripeningPlantCell201123923mdash941[75]LeeJMJoungJGMcQuinnRetalCombinedtranscriptomegeneticdiversityandmetaboliteprofilingintomatofruitrevealsthatthe
ethyleneresponsefactorSlERF6playsanimportantroleinripeningandcarotenoidaccumulationPlantJournal201270191mdash204[76]ShimaYFujisawaMKitagawaMetalTomatoFRUITFULLhomologsregulatefruitripeningviaethylenebiosynthesisBioscience
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TAGL1PlantCell2009213041mdash3062[78]WangSLuGHouZetalMembersofthetomatoFRUITFULL MADSGboxfamilyregulatestyleabscissionandfruitripening
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participatesinIAAbiosynthesisduringfruitripeningJournalofExperimentalBotany2015667031mdash7044[81]BoettcherCKeyzersRABossPKetalSequestrationofauxinbytheindoleG3GaceticacidGamidosynthetaseGH3G1ingrapeberry(Vitis
viniferaL)andtheproposedroleofauxinconjugationduringripeningJournalofExperimentalBotany2010613615mdash3625[82]SuLDirettoGPurgattoEetalCarotenoidaccumulationduringtomatofruitripeningismodulatedbytheauxinGethylenebalance
BMCPlantBiology201515[83]WengLZhaoFLiRetalThezincfingertranscriptionfactorSlZFP2negativelyregulatesabscisicacidbiosynthesisandfruitripening
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2011157188mdash199[85]CreelmanRAMulletJEBiosynthesisandactionofjasmonatesinplantsAnnualReviewofPlantPhysiologyandPlantMolecular
Biology199748355mdash381[86]LiTXuYZhangLetalThejasmonateGactivatedtranscriptionfactorMdMYC2regulatesETHYLENERESPONSEFACTORand
ethylenebiosyntheticgenestopromoteethylenebiosynthesisduringapplefruitripeningPlantCell2017291316mdash1334[87]RudellDRMattheisJPFanXetalMethyljasmonateenhancesanthocyaninaccumulationandmodifiesproductionofphenolicsand
pigmentsinlsquoFujirsquoapplesJournaloftheAmericanSocietyforHorticulturalScience2002127435mdash441[88]LiuLWeiJZhang MetalEthyleneindependentinductionoflycopenebiosynthesisintomatofruitsbyjasmonatesJournalof
ExperimentalBotany2012635751mdash5761
DuanXuewu
ProfDuanXuewureceivedhisPhDdegreefromtheGraduateSchoolof
ChineseAcademyofSciencesin2004Heiscurrentlyaprofessorof
South China Botanical GardenChinese Academy ofSciencesHis
researchinterestsincludebiochemistryandmolecularbiologyinrelation
to ripeningsenescence and deterioration of postharvestfruits and
vegetablesespeciallytranscriptionalregulationandposttranscriptional
modificationanddevelopmentofstorageandhandlingtechniquesin
subtropicalandtropicalfruitHewasthePrincipalInvestigatorofmore
than20projectsfromthegovernmentUptonowhehaspublishedmorethan90papersandhasbeen
patented29inventionpatentsincludinganUSApatent
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56 Vol26No12018 SCIENCEFOUNDATIONINCHINA
complexcarotenoidcompositionsimplyingthatvariousandmultifacetedregulatorymechanismsmayexistinfruits[6]Thereviewfocusesonrecentunderstandingoftheregulationofcarotenoidbiosynthesisincludingtranscriptionalposttranscriptionalandhormoneregulationinplantsespeciallyinfruits
2 Diversityofcarotenoidsinfruits
Fruitsarethe majorsourceofcarotenoidsforpromotinghumanhealthandprovidingnutritionalbenefitsAlargenumberoffruitsaccumulatecarotenoidsCarotenoidcontentandcompositionvarygreatlyamongdifferentspeciesoffruitsBasedonthetotalcarotenoidcontentsfruitscanbeclassifiedintofourgroups[7](1)low (<1μgg-1freshweight(fw))suchasstrawberry[8](2)moderate(1mdash5μgg-1fw)suchaswhiteGfleshpeach[9](3)high(5mdash20μgg-1fw)suchasyellowpepper[10]and(4)veryhigh(>20μgg-1fw)suchasredGfleshsweetorange[11]InadditiontogeneticvariationdevelopmentalstageandtissuespecificitygreatlyinfluencecarotenoidcompositionsandcontentsinfruitsAtthegreenstageoffruitscarotenoidsare maskedbychlorophyllsandthepredominantcarotenoidisluteinfollowedbyβGcaroteneviolaxanthinandneoxanthin [7]Thischaracterisverycommon among different species offruits When ripeningremarkable differencesin carotenoidcompositionsandcontentsareexhibitedamongdifferentspeciesevendifferentcultivarsortissueswithinthesamespeciesMostoftenmorecarotenoidsaccumulateinpeeltissuesthaninpulptissues[12]Table1summarizestotalcarotenoidcontentsandthemajorcarotenoidspresentinediblepartsofthemostwidelyconsumedfruits
Table1 Carotenoidsaccumulationinediblepartsofthemostwidelyconsumedfruits(ripe)worldwide1)
Fruitspecies Totalcarotenoidcontent Majorcarotenoid References
Apple 9mdash24μggdw Xanthophyll [13]
Banana(ripe) 16mdash105μggfw βGCaronteneαGCarontene [14]
Grape 15mdash3μggfw LuteinβGCarontene [15]
Citrus(redfleshGrapefruit) 13mdash74μggfw βGCaronteneLycopenelutein [16]
Citrus(yellowfleshgrapefruit) 12mdash60μggfw βGCaronteneluteinZeaxanthinβGCryptoxanthin [16]
Citrus(whitefleshgrapefruit) >2μggfw PhytoeneViolaxanthinZeaxanthin [17]
Citrus(mandarin) >25μggfw βGCryptoxanthinPhytoeneβGCaronteneζGCaronteneViolaxanthin
Citrus(redGfleshsweetorange) 45mdash107μggfw Phytoenephytofluenelycopene9GcisGViolaxanthin [1019]
Citrus(yellowGfleshsweetorange) 2mdash10μggfw 9GcisGViolaxanthinantheraxanthin [1019]
Kiwifruit >30μggfw βGCaronteneLutein [20]
Mango >190μggfw βGCaronteneViolaxanthinLutein [21]
Melon(orangeflesh) 550μggdw βGCaronteneβGcryptoxanthin [22]
Papaya(yellowflesh) 336μggfw βGCryptoxanthinβGCarontene [23]
Papaya(redflesh) 592μggfw LycopeneβGCryptoxanthinζGCaronteneβGCarontene [23]
Peach(yellowflesh) 10mdash12μggfw AntheraxanthinLuteoxanthinZeaxanthin [9]
Peach(whiteflesh) <2μggfw ViolaxanthinLuteinZeaxanthin [9]
Pepper(red) 180mdash1100μggdw CapsanthinβGCryptoxanthinZeaxanthinβGCarontene [11]
Pepper(yellow) 12mdash20μggfw LuteinβGCarontene [11]
Strawberry <03μggfw βGCaronteneLutein [8]
Tomato 5mdash135μggfw LycopeneβGCarontenePhytoenePhytofluene [24]
Watermelon(redGflesh) 30mdash70μggfw Lycopene [25]
Watermelon(yellowGflesh) 5μggfw ViolaxanthinLutein [2526]
1)fwindicatesfreshweightdwindicatesdryweight
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SCIENCEFOUNDATIONINCHINA Vol26No12018 57
CitrusisoneofthemosteconomicallyimportantediblefruitsworldwidewiththemostdiversecarotenoidcompositionMostcultivatedcitrusesarenaturalorartificialhybridsoffourcoreancestralspeciescitronpummelomandarine and papeda The commercially important cultivated citrusinclude orangegrapefruitmandarinandlemonCarotenoidaccumulationvariesgreatlyin differentcitrusspeciesMandarinand orangeaccumulate primarily βGcryptoxanthin and violaxanthinwhile grapefruitandpummeloarerichinphytoenephytoflueneandlycopene[17182728]Inadditionlemonandlimecontainlowlevelsofcarotenoids[18]
TomatohasbeenwidelyusedasamodelfruittoresearchcarotenoidmetabolismTomatofruitdisplaysdiversecolorvariationwhichisattributedbythedifferentialcarotenoidaccumulationRedtomatomainlycontainslycopeneaccountingforupto90ofthetotalcarotenoids[24]SomemutanttomatofruitswithdiversecolorsarecharacterizedbyabnormalcarotenoidbiosynthesisForexampleorangetmutant[29]orangeredDeltamutant[30]andorangeBeltamutantfruit[31]accumulateprimarilyproGlycopeneδGcaroteneandβGcarotenerespectively
PapayaisanimportantcommercialfruitcultivatedintropicalandsubtropicalareasandisrichincarotenoidThecompositionsofcarotenoidinpapayadeterminethefruitcolorYellowGfleshedpapayavarietyaccumulatesmainlyβGcryptoxanthinandβGcarotenewhileredGfleshedcultivarmainlylycopene[23]
SimilartopapayadifferentcarotenoidcompositionsgivepepperfruitdiversecolorsRedpeppercontainsthehighestcarotenoidcontentamongallthecommonediblefruitswiththecontentofupto1100μgg-1fwThepredominantcarotenoidsinredpepperarecapsanthin[32]YellowpepperarerichinluteinandαGorβGcarotenewhileorangepeppercontainsprimarilycapsanthinluteinandorβGcarotene[3334]
Watermelonisoneofthe mostpopularfruitsinthe worldFleshcoloristheimportanttraitofwatermelonCarotenoidsareresponsiblefordiversecolorsin watermelonfruit [25]RedGfleshedwatermelonsconsistedprimarilyoflycopenewithasmallamountofphytoenephytoflueneζGcaroteneαGcaroteneluteinzeaxanthinandviolaxanthin[25]whileviolaxanthinandluteinconstitutethemajorcarotenoidsinorangeGfleshedwatermelon[2526]
3 Biosynthesisofcarotenoids
Inhigherplantscarotenoidsaresynthesizedinvarioustypesofplastidsincludingproplastidsetioplastschloroplastsamyloplastsandchromoplasts[35]ThecarontenoidbiosynthesispathwayhasbeenwellestablishedwhichinvolvesthreeimportantprocessesbiosynthesisofprecursorformationoflinearchaincarotenoidsandcyclizationoflycopeneThegenesandenzymesinvolvedintheseprocessesforplantsareillustratedinFigure1Alargenumberofgenesfromfruitsinrelationtocarotenoidbiosynthesisandregulationalsohavebeenclonedandcharacterized
Thebiosynthesisofcarotenoidsdependsonthesupplyoftwobasicbuildingblocksofcarotenoidsisopentenyldiphosphate(IPP)anddimethylallyldiphosphate(DMAPP)[6]whichareproducedvia2CGmethylGDGerythritolG4Gphosphate(MEP)pathwaySevenenzymesareinvolvedinMEPpathwayincluding1GdeoxyxyluloseG5Gphosphatesynthase(DXS)1GdexoyGDGxylulose5Gphosphatereductoisomerase(DXR)MEPcytidylyltransferase(MCT)4G(cytidine51049011Gdiphospho)G2GCGmethylGDGerythritol(CDPGME)kinase(CMK)2GCGmethylGDGerythritol24Gcyclodiphosphate (MECDP)synthase (MDS)(e)G4GhydroxyG3GmethylbutG2GenG1Gyldiphosphate(HMBPP)synthase(HDS)and HMBPPsynthasereductase (HDR)[36]ThefirststepinMEPpathwayisregulatedbyDXSarateGlimitingenzymeincarotenogensisTheoverexpressionofDXSenhancescarotenoidaccumulationin ArabidopsiswhilethemutationofDXSresultsinnocarotenoidaccumulation[37]AnotherkeyregulatorystepisHDRthelastenzymeinMEPpathwaywhichcatalyzestheproductionofIPP[38]IPPisisomerizedtoDMAPPviaIPPisomeraseIPPandDMAPPundergocondensationreactionsgeneratingthemajorcarotenoidprecursorgeranylgeranyldiphosphate (GGPP)Thereactionsarecatalyzed byisopentenyldiphosphateisomerase (IPI)and
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Figure1 BiosynthesisandregulationofcarotenoidsinplantsThegreyrectanglesrepresentthesubstratesandmetabolitesinthecarotenoid biosynthesispathwayTheblueellipsesrepresenttheenzymesandtheirgenesinvolvedincarotenoidbiosynthesisThegreenellipsesrepresenttranscriptionfactorsregulatingcarotenoidbiosynthesisTheredellipsesrepresentproteinsinvolvedintheposttranscriptionalregulationofcarotenoidbiosynthesisTheyellowellipsesrepresenttheproteinsinvolvedinepigeneticmodificationofcarotenoidbiosynthesisThepurpleellipsesrepresentmiRNAinvolvedintheregulationofcarotenoidbiosynthesisBCHnonGhemeβGcarotenehydroxylaseCDPGME4G(cytidine51049011Gdiphospho)G2GCGmethylGDGerythritolCDPGME2P2GphosphoG4G(cytidine51049011Gdiphospho)G2GCGmethylGDGerythritolCMKCDPGMEkinaseCRTISOcarotenoidisomerase CYP97A and CYP97Ccytochrome P450Gtype monooxygenase 97C DMAPPdimethylallyldiphosphateDXPdeoxyGDGxylulose5GphosphateDXR1GdexoyGDGxylulose5GphosphatereductoisomeraseDXS1GdeoxyxyluloseG5GphosphatesynthaseG3Pglyceraldehyde3GphosphateGGPPgeranylgeranyldiphosphateGGPPSGGPPsynthaseHDRHMBPPreductaseHDSHMBPPsynthaseHMBPP(e)G4GhydroxyG3GmethylbutG2GenG1GyldiphosphateIPIisopentenyldiphosphateisomeraseIPPisopentenyldiphosphateLCYBlycopeneβGcyclaseLCYElycopeneεGcyclaseMCTMEPcytidylyltransferaseMDSMECDPsynthaseMECDP2CGmethylGDGerythritol24GcyclodiphosphateMEP2CGmethylGDGerythritolG4Gphosphate NSY Neoxanthin synthasePDSphytoene desaturasePSYphytoenesynthaseVDEviolaxanthindeGepoxidaseZDSζGcarotenedesaturaseZEPzeaxanthinepoxidaseZGISOζGcaroteneisomerase
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geranylgeranyldiphosphate(GGPP)synthase(GGPPS)[39]ThecondensationoftwoGGPPmoleculescatalyzedbyphytoenesynthase(PSY)formsuncolored15Gcis
phytoenethefirstcarotenoidproductThisstepisregardedasthemostimportantregulatorystepincarotenoidbiosynthesis[39]TomatocontainsthreePSYgenesPSY1PSY2andPSY3whichexhibittissueGspecificexpressionmainlyinfruitinpetalandinrootrespectivelyDuringtomatoripeningtheaccumulationofcarotenoidcorrelateswiththeexpressionofPSY1 [4041]TransgenictomatobyantisenseinhibitionofPSY1producesonly3ofthecarotenoidinwildtypewildtypefruit[42]SimilarresultsregardingtherelationshipbetweenupregulatedexpressionofPSYgenesandincreasedcarotenoidaccumulationhavebeenreportedinalargenumberoffruitssuchascitrus[43]pepper[34]persimmon[44]loquat[12]watermelon [25]andbanana[45]Uncoloredphytoenethenundergoesaseriesofdesaturationandisomerizationreactionsto generateredGcolored allGtransGlycopenethe predominatepigmentinredtomatoand watermelonfruitsThesereactionsaresequentiallycatalyzedbyphytoenedesaturase(PDS)ζGcarotenedesaturase(ZDS)ζGcaroteneisomerase(ZGISO)andcarotenoidisomerase(CRTISO)[39]
Downstreaminthecarotenoidbiosynthesispathwaythecyclizationoflycopeneislocatedatthebranchingpointofthepathwaywhichproduceaseriesofcarotene(Figure1)[6739]ThecyclizationoflycopeneinvolvestwoenzymeslycopeneβGcyclase(LCYB)andlycopeneεGcyclase(LCYE)LCYBcatalyzesatwoGstepreactiontoproduceβGcarotenewithtwoβGringsAεGringandaβGringaresequentiallyaddedtolycopeneformingαGcarotene(βεGcarotene)whichiscatalyzedbyLCYEandLCYBFollowingthecyclizationoflycopeneαGcaroteneandβGcarotenearesubjectedtohydroxylationandepoxidationformingaseriesofxanthophylls[6739]TheαGcaroteneissequentiallycatalyzedbytwohydroxylasesCYP97A and CYP97CgeneratingluteinthefinalproductofαGbranchincarotenoid biosynthesispathwayβGcaroteneundergoestwostepsofhydroxylationandtwostepsofepoxidationcatalyzedbyβGcarotenehydroxylase (BCH)andzeaxanthinepoxidase (ZEP)sequentiallyformingβGcryptoxanthinzeaxanthinantheraxanthinandviolaxanthin[6739]Theconversionofviolaxanthinintoneoxanthinbyneoxanthinsynthase(NXS)completesthecorebiosynthesispathway[46]
4 Transcriptionalregulationofcarotenoidbiosynthesis
41 TranscriptionfactorTranscriptionalregulationplaysavitalroleinfruitdevelopmentandripeningaswellasabioticstresses
ItiswellknownthattranscriptionfactorsareinvolvedintranscriptionregulationofstructureandfunctiongenesincarotenoidbiosynthesispathwayAlthoughthegenesinvolvedinthebiosynthesisofcarotenoidbiosynthesishavebeenidentifiedandcharacterizedfromvariousfruits(Figure1)onlyafewtranscriptionfactorshavebeendemonstratedtodirectlyregulatetheexpressionofthesefunctiongenesinthepathwayThetranscriptionalcontrolofcarotenoidaccumulationhasbeenmostlystudiedintomatoduringripeningThesetranscriptionfactorsinclude RINR2R3GMYBNACSGR1PIF1RAP22EIN3etcHowevermostofthesetranscriptionfactorsexertbroadeffectsonfruitripeningieethylenesynthesisfruitsofteningcolorformationaromaandflavorproductionandareunlikelytobespecificregulatorsofcarotenoidbiosynthesis
RIPENINGGINHIBITOR (RIN)isa memberoftranscriptionfactorfamilycontaining MADSGboxwhichplaysanessentialroleinfruitripeningasaglobalmasterregulator[47]MarteletalreportedthatRINinteractswithSlPSY1thespecificPSYgeneassociatedwithcarotenoidbiosynthesisintomato[48]FujisawaetalidentifiedanumberofRINGtargetedgenesincarotenoidbiosynthesispathwaybychromatinimmunoprecipitationcoupled with DNA microarrayanalysisandfoundthatRIN regulatescarotenoidaccumulationviapositivelyregulatingPSY1ZISOandCRTISOinadirectmanneraswellaspositivelycontrollingZDSandnegativelyregulatingLYCBandLYCEbyanindirecteffectintomatofruit[49]
VGmybmyeloblastosisviraloncogenehomolog(MYB)proteinsbelongtoalargefamilyoftranscriptionfactorsinplantsThemajorityofMYBareR2R3GMYBsubfamilywithtworepeatsinitsMYBdomain
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TheR2R3GMYBTFsplaykeyrolesinregulatingplantGspecificprocessesincludingprimaryandsecondarymetabolismgrowthanddevelopmentandresponsetoabioticandbioticstresses [50]IncitrusCrMYB68an R2R3GMYBtranscriptionalfactorcandirectlybindandnegativelyregulateCrBCH2resultinginthedelayinthetransformationofαGandβGcaroteneandtheinhibitionofpeeldeGgreeningincitrus[51]SimilarlySagawaetalidentifiedanR2R3GMYBtranscriptionfactorReducedCarotenoidPigmentation1(RCP1)whichpositivelyregulatescarotenoidbiosynthesisduringMimuluslewisiiflowerdevelopmentLossGofGfunctionmutationsinRCP1resultindownGregulationofallcarotenoidbiosyntheticgenesandreducecarotenoidcontentwhileoverexpressionofthisgeneinthercp1 mutantbackgroundrestorescarotenoidproduction[52]Thereforeinadditiontoregulatinganthocyanins[53]R2R3GMYBisalsoinvolvedintheregulationofcarotenoidbiosynthesisinfruits
NAMATAF12andCUC2 (NAC)transcriptionfactorsareoneofthelargestfamiliesofplantGspecifictranscription factors which areimplicated in plant growth and developmentflavonoidbiosynthesiswoodformationandstressresponses [54]TheroleofNACtranscriptionfactorsinregulatingfruitripeningandsenescencehasbeenreportedintomato[55]banana[56]andlitchi[54]IntomatoSlNAC1and SlNAC4 positivelyregulatetomatofruitripeningbutexhibitdifferentialcharacteristicsAntisensesuppression ofSlNAC1 resultsin delayed ethylene production andfruitripeningbuthigherlevelsofethylenebiosynthesisandaccumulationoftotalcarotenoidandlycopeneaccompaniedbyupGregulatedexpressionofgenesrelatedtolycopeneandethylenebiosynthesis [55]DifferentfromSlNAC1reducedexpressionofSlNAC4byRNAinterference(RNAi)intomatodelayedfruitripeningdecreasedethylenesynthesisandreducedcarotenoidsbyalteringcarotenoidpathwayflux[57]AdditionallyFuetalreportedthatpapayaCpNAC2actsasatranscriptionalactivatorofCpPDS24CpZDSCpLCYGeandCpCHYGb by directly bindingtotheirpromotersand promotestheirtranscription[58]
SomeothertranscriptionfactorshavealsobeenreportedtobeinvolvedinthetranscriptionalregulationofstructuregenesinthecarotenoidbiosynthesispathwayIntomatoSlSGR1aSTAYGGREENproteinphysicallyinteracts with PSY1 to suppress PSY1 expressionthus negatively regulatinglycopeneproductionduringfruitripening[59]PhytochromeGinteractingfactor1downGregulatetheaccumulationofcarotenoidbybindingtothepromoterofPSYandrepressingPSYexpressioninArabidopsisseedlings[60]SimilarlyAtPAP22amemberoftheAPETALA2 (AP2)ethyleneGresponsiveelementGbindingproteintranscriptionfactorfamilydirectlybinds withthepromotersofPSY andPDS toregulatecarotenoidbiosynthesisinArabidopsis [61]PapayaCpEIN3aanethyleneresponsivefactordirectlybindswiththepromotersofCpPDS4andCpCHYGbandpromotestheirtranscription[58]InadditionoverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor(CrbHLH1)intomatolowerslycopeneaccumulationanddownGregulatecarotenoidbiosyntheticgeneexpressionintomatofruit[62]EctopicexpressionofanArabidopsisBZR1G1Dtranscriptionfactorinbrassinosteroidsignalingenhancescarotenoidaccumulationandfruitqualityattributesintomato[63]42 Epigeneticmodification
EpigeneticmodificationincludingthemethylationofDNACpGislandsandthemodificationofhistonesthatassociatedwithDNAinchromosomesplayaveryimportantroleinregulatinggeneexpressionEpigeneticmodification possiblyisimplicatedinregulation ofcarotenoid biosynthesis (Figure1)Cazzonellietalreportedahistonemethyltransferaseenzyme(SET DOMAIN GROUP8SDG8)thatmethylateshistoneH3onLys4andor36(H3K4andH3K36)inArabidopsisthalianawhichisrequiredforexpressionofCRTISOgeneMutationofSDG8resultsindownGregulatedexpressionofCRTISOgeneimpairedlutein biosynthesis andincreased shoot branchingThis wasthefirstreportregardinginvolvementofepigeneticmodificationinregulationofcarotenoidbiosynthesis[64]43 AlternativeRNAsplicing
AlternativeRNAsplicingisanimportantregulationofgeneexpressioninhighereukaryotesRecentlyAlvarezetalfoundthatalternativesplicingofPSYisimplicatedinregulationofcarotenogenesisinArabidopsisArabidopsispredominantlypossessasinglePSYgenewithtwoalternativesplicevariants
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(ASV)inlength andintheexonintronretention oftheir51049011UTRsASV1 with along 51049011UTR(untranslatedregion)isinvolvedindevelopmentallyregulatedcarotenoidformationwhileASV2withashort51049011UTRispreferentiallyinduced whenanimmediateincreaseinthecarotenoidpathwayfluxisrequired[65]44 microRNAs
MicroRNAs(miRNAs)arekeyregulatorsofgeneexpressionineukaryotesandplayapivotalroleintheregulationofvariousbiologicalaswellas metabolicprocessesInterestinglyanartificialmaturemicroRNAs (amiRNAs)successfullytargetedthe PSY mRNA andreduced PSY mRNA levelinPhaeodactylumtricornutumwhichfurtherreducedthelevelsofcarotenoidsinthePtricornutumamiRNAknockdownlines[66]ItwasspeculatedthatmiRNApossiblyisinvolvedinthetranscriptionregulationofcarotenoidbiosynthesisinplants
5 PostGtranscriptionalregulationofcarotenoidsbiosynthesis
InadditiontotranscriptionregulationofstructuregenesinvolvedinthecarotenoidpathwayrecentstudieshaverevealedotherregulatorymechanismstocontrolbiosyntheticenzymelevelsandactivitiesinplantssuchaspostGtranscriptionalregulation (Figure1)Theseregulatory mechanismspossiblyarepresentduringfruitdevelopmentandripening
ORANGE(OR)isaplastidGlocalizedproteincarryingacysteineGrichzincfingerdomainPreviousstudiedshowedthatORpromotescarotenoidaccumulationincalliofrice[67]andsweetpotato [68]FurtherZhouetalfoundthatArabidopsisORandPSYphysicallyinteractwitheachotherinplastidsresultingin minimaleffecton expression ofPSY gene [69]Howeveroverexpression of AtORsignificantlyincreasedtheamountofenzymaticallyactivePSYwhereasanatoratorGlikedoublemutantexhibitsadramaticallyreducedPSYlevelTheresultrevealedanovelmechanismunderlyingregulationofcarotenoidbiosynthesisviaposttranscriptionalmodificationofPSYinplants[69]
Inanotherimportantliterature on postGtranscriptionalregulation Welsch et alreported thatdegradationmodificationofproteinincarotenoidbiosynthesispathwayisimplicatedinregulationofcarotenoidbiosynthesisClpproteasesystemthemostabundantandcomplexsolubleproteasesystemintheplastidwasshowntotargetPSYTheabsenceofCLPC1CLPP4andCLPR1G2enhancedthelevelsofactivePSYandseveralothercarotenogenicenzymes[70]ThereforeORproteincounterbalancesClpGmediatedproteolysisinmaintainingPSYproteinhomeostasis
Theauthors1049011researchteamalsodiscoveredanindirectlypostGtranscriptionalregulatorymechanismtoregulateexpressionofPSYgeneinbananafruitSulfoxidationofproteinsbyreactiveoxygenspeciescancauseconformationalalterationorfunctionalimpairmentswhichcouldbereversedby Metsulfoxidereductase(Msr)ItwasfoundthatCaM1isasubstrateofMaMsrA7anditssulforxidationisrepairedbyMaMsrA7MaHY5G1actingasatranscriptionalrepressorofMaPSY1MaPSY2andMaPSY3inbananafruitisa CaMGbindingproteinSulfoxidationregulationof MaCaM1 by MaMsrA7altersexpressionofMaPSY1MaPSY2andMaPSY3genesbymodifyingMaHY5G1transcriptionalactivity(nopublisheddata)
TwootherproteinsalsohavebeenreportedtoberelatedtoposttranscriptionalregulationofcarotenoidbiosynthesisSlSGR1atomatoSTAYGGREENproteinregulateslycopeneaccumulationduringtomatofruitripeningviadirectinteractionwithPSY1[59]AnotherexampleisthepostGtranslationalregulationofDXSJGproteinJ20 (chaperoneproteindnaJ20)interactsdirectlywithDXSregulatingDXSproteinlevelandactivitybyidentifyingunfoldedormisfolded(damaged)formsofDXSandtargetingthemtotheHsp70systemforproperfoldingundernormalconditionsordegradationuponstress[71]
6 Hormonalregulationofcarotenoidbiosynthesis
Fruitripeningisacomplexandgeneticallyprogrammedprocesswhichinvolvesaseriesoforganolepticphysiologicaland biochemical changesresulting in the development of edible quality [72]
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PhytohormonesplaycrucialrolesinfruitripeningwhichhasbeenshowntoaffectcarotenoidaccumulationinfruitsMajorprogressregardingtheinvolvementofphytohormonesinregulatingcarotenoidbiosynthesishasbeenachievedinfruits
Ethyleneplaysa centralrolein climactericfruitripeningTherole ofethylenein carotenoidaccumulationinclimactericfruitshasbeenwidelystudiedIntomatoethyleneinitiatesfruitripeningresultinginarapidcolorshiftfromgreentoredwithincreasedlycopeneaccumulationanddecreasedβGxanthophyllsandchlorophyllscontentsTheroleofethyleneinregulatingcarotenoidbiosynthesisduringtomatofruitripeninginvolvesacomplexregulatorynetworkoftranscriptionfactorsRINasamasterregulatorbindstothepromotersofgenesinvolvedinfruitripeningprocessesincludingcarotenoidbiosynthesis[484973]APETALA2a(AP2a)isamemberofAP2ERFsuperfamilywhichregulatestomatofruitripeningbyregulatingethylenebiosynthesisandsignalingRepressionofAP2abyRNAinterference (RNAi)resultsin decreasedlevels ofphytoeneandlycopenebut higherβGcaroteneaccumulationconsistentwithdownGregulatedexpressionofPDSCtRGb2andCtrlSOandupGregulatedexpressionofZEP1MoreoverseveralripeningGrelatedregulatorsRIPENINGGINHIBITOR (RIN)NONGRIPENING (NOR)andCOLORLESSNONGRIPENING (CNR)functionupstreamofAP2aandpositivelyregulateitsexpression[74]SlERF6anothermemberofAP2ERFsuperfamilyisanegativeregulatorofcarotenoidaccumulationReducedexpressionofSlERF6byRNAienhancedbothcarotenoidandethylenelevelsduringfruitripening[75]InadditionthreeothertranscriptionfactorsarerelatedtotheethylenepathwayincludingTAGL1FRUITFULL1and2whichhavebeenreportedtopositivelyregulatecarotenoidaccumulationduringtomatoripening[76mdash78]
Auxinisinvolvedincellexpansionanddivisiontissuedifferentiationorgandevelopmentandarangeofphysiologicalprocess[79]Recentlyincreasingevidencesshowthatauxinalsoplaysanimportantroleinregulatingfruitripening[80]TheleveloffreeIAA (themostabundantauxin)tendstodeclinepriortotheonsetoftomatofruitripening[81]AuxinnegativelycontrolscarotenoidaccumulationintomatofruitExogenousIAA treatmentsignificantlyreduceslycopeneaccumulationbutenhancesthelevelsofneoxanthinandviolaxanthinaccompaniedbydownGregulatedexpressionofPsy1Psy3PdsZisoandCrtisoandupGregulatedexpressionofβGLcy1andCrtrGβ1 [82]Howeverwhetherauxindirectlyregulatesthegenesincarotenoidpathwayremainsunknown
Abscisicacid (ABA)isa key hormoneinvolvedintuningresponsestoabioticstressesLittleinformationisavailableabouttheinvolvementofABAinregulatingcarotenoidaccumulationduringtomatofruitripeningABA hasbeenreportedto beimplicatedinfruitripeningandinfluencecarotenoidaccumulationintomato[83]andstrawberry[84]fruit
JAssuchasmethyljasmonicacidjasmonicacidandotherderivativesareplantendogenoushormones[85]JAsalsoplayimportantrolesinfruitripeningLietalreportedthatJAinduceethyleneproductionbyMdMYC2GmediatedandMdERF3GmediatedupregulationofMdACS1gene[86]Applicationofmethyljasmonate(MeJA)increasestheaccumulationofanthocyaninβGcarotenecontentsandseveralphenoliccompounds[87]LiuetalfurtherilluminatedtheroleofJAinregulatingcarotenoidaccumulationduringtomatofruitripeningwithJAGdeficientmutants(spr2anddef1)anda35∷prosystransgenicline(35∷prosyswithincreasedJAlevelsandconstitutiveJAsignaling)andfoundthatlycopeneaccumulationissignificantlyinhibitedinspr2anddef1fruitbutenhancedin35S∷prosysfruitaccompaniedbyasimilartrendofexpressionoflycopenebiosyntheticgenes[88]Inadditionethyleneproductionisdepressedinspr2anddef1fruitbutincreasedin35S∷prosysfruitMoreovertheexogenousapplicationofMeJAtoNeverripe (Nr)an ethyleneGinsensitive mutantresultsin enhancedlycopene accumulation andexpressionoflycopenebiosyntheticgenes [88]TheseresultsindicatedthatJA promoteslycopenebiosynthesisinamannerindependentofethylene
7 Futureresearchdirections
CarotenoidmetabolismandregulationhavebeenwidelyresearchedinplantsHoweverthecarotenoidG
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relatedstudieshavebeenmostlyfocusedonmodelspeciessuchasArabidopsisandtomatoThemolecularmechanismsunderlyingcarotenoid metabolism andregulationin otherfruitspeciesarestillpoorlyunderstoodConsideringthediversityofcarotenoidsinfruitsitisnecessarytoinvestigatethenovelgenesandregulationmechanismsrelatedtocarotenoidbiosynthesisinplants
Carotenoid accumulation is cooperatively controlled at multiple levelsincluding developmentalprogramsenvironmentalfactorsand metabolicsignalsTranscriptionfactorsplayimportantroleinregulatingcarotenoidbiosynthesisHoweveronlyafewtranscriptionfactorsinvolvedincarotenoidbiosynthesisareidentifiedandtranscriptionregulationismainlyrelatedtoexpressionofPSYMoreovermostofthesetranscriptionfactorsexerttheirinfluencesviaregulatingfruitripeningnotspecificcarotenoidbiosynthesisGrelated genesTheinteracting partners oftranscriptionfactorsinvolvedincarotenoidmetabolicnetworkalsoremaintobeidentifiedPostGtranscriptionalregulationalternativeRNAsplicingepigeneticmodificationandmiRNAareofimportanceinplantgrowthanddevelopmentandresponsetoabioticstressHoweverlittleinformationregardingtheinvolvementofthesemechanismsinregulating carotenoid metabolism in planteven in Arabidopsisis available Application ofphytohormonescontributestoregulatecarotenoidcontentand maintainfruitqualityinagricultureandpostharvesttreatmentThemechanismunderlyingregulationofcarotenoidmetabolismbyphytohormonesespeciallycrossGtalkamongdifferentphytohormonesarestillfarfrombeingunderstoodInthefuturestudiesbetterunderstandingofcarotenoid metabolismandregulationinfruitswillnotonlyhaveanimportantimpactongeneticimprovementandpostharvesttreatmentbutalsowillstrengthenknowledgeofcarotenoidregulationinplants
Acknowledgements
ThisworkwassupportedbytheNationalNaturalScienceFoundationofChina(GrantNos3177204131322044and31501545)ScienceandTechnologyPlanningProjectofGuangdongProvince(GrantNo2015B090901058)ScienceandTechnologyPlanningProjectofGuangzhou (GrantNo201604020048)andTalentProgramofGuangdongProvince(No2014TX01N049)
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multiplelevelsJournalofExperimentalBotany201263517mdash526[35]SunTYuanHCaoHetalCarotenoidmetabolisminplantstheroleofplastidsMolecularPlant20181158mdash74[36]BramleyPMRegulationofcarotenoidformationduringtomatofruitripeninganddevelopmentJournalofExperimentalBotany2002
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inplantsJournalofBiologicalChemistry200127622901mdash22909[38]BotellaGPaviaPBesumbes OPhillips MAetalRegulationofcarotenoidbiosynthesisinplantsevidenceforakeyroleof
hydroxymethylbutenyldiphosphatereductaseincontrollingthesupplyofplastidialisoprenoidprecursorsPlantJournal200440188mdash
199[39]CazzonelliCIPogsonBJSourcetosinkregulationofcarotenoidbiosynthesisinplantsTrendsinPlantScience201015266mdash274[40]FraserPDEnfissiEMAHalketJMetalManipulationofphytoenelevelsintomatofruiteffectsonisoprenoidsplastidsand
intermediarymetabolismPlantCell2007193194mdash3211[41]FraserPDRomerSKianoJWetalElevationofcarotenoidsintomatobygeneticmanipulationJournaloftheScienceofFoodand
Agriculture200181822mdash827[42]RayJMoureauPBirdCetalCloningandcharacterizaitonofageneinvolvedinphytoenesynthesisfromtomatoPlantMolecular
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[43]PengGWangCSongSetalTheroleof1GdeoxyGDGxyluloseG5GphosphatesynthaseandphytoenesynthasegenefamilyincitruscarotenoidaccumulationPlantPhysiologyandBiochemistry20137167mdash76
[44]ZhaoDZhouCTaoJCarotenoidaccumulationandcarotenogenicgenesexpressionduringtwotypesofpersimmonfruit(DiospyroskakiL)developmentPlantMolecularBiologyReporter201129646mdash654
[45]MlalaziBWelschRNamanyaPetalIsolationandfunctionalcharacterisationofbananaphytoenesynthasegenesaspotentialcisgenesPlanta20122361585mdash1598
[46]NeumanHGalpazNCunningham FXetalThetomatomutationnxd1revealsagenenecessaryforneoxanthinbiosynthesisanddemonstratesthatviolaxanthinisasufficientprecursorforabscisicacidbiosynthesisPlantJournal20147880mdash93
[47]VrebalovJRuezinskyDPadmanabhanVetalA MADSGboxgenenecessaryforfruitripeningatthetomatoripeningGinhibitor(Rin)
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promotersinvolvedinnumerousripeningprocessesinaCOLORLESSNONRIPENINGGdependentmannerPlantPhysiology2011157
1568mdash1579[49]Fujisawa MNakanoTShimaYetalAlargeGscaleidentificationofdirecttargetsofthetomato MADSBoxtranscriptionfactor
RIPENINGINHIBITORrevealstheregulationoffruitripeningPlantCell201325371mdash386[50]DubosCStrackeRGrotewoldEetalMYBtranscriptionfactorsinArabidopsisTrendsinPlantScience201015573mdash581[51]ZhuFLuoTLiuCetalAnR2R3GMYBtranscriptionfactorrepressesthetransformationofalphaGandbetaGbranchcarotenoidsby
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flowersNewPhytologist20162091049mdash1057[53]JaakolaLNewinsightsintotheregulationofanthocyaninbiosynthesisinfruitsTrendsinPlantScience201318477mdash482[54]JiangGYanHWuFetalLitchifruitLcNAC1isatargetofLcMYC2andregulatoroffruitsenescencethroughitsinteractionwith
LcWRKY1PlantandCellPhysiology2017581075mdash1089[55]MengCYangDMaXetalSuppressionoftomatoSlNAC1transcriptionfactordelaysfruitripeningJournalofPlantPhysiology
201619388mdash96[56]ShanWKuangJFChenLetalMolecularcharacterizationofbananaNACtranscriptionfactorsandtheirinteractionswithethylene
signallingcomponentEILduringfruitripeningJournalofExperimentalBotany2012635171mdash5187[57]ZhuMChenGZhouSetalAnewtomatoNAC (NAMATAF12CUC2)transcriptionfactorSlNAC4functionsasapositive
regulatoroffruitripeningandcarotenoidaccumulationPlantandCellPhysiology201455119mdash135[58]FuCCHanYCKuangJFetalPapayaCpEIN3aandCpNAC2cooperativelyregulatecarotenoidbiosynthesisrelatedgenesCpPDS2
4CpLCYGeandCpCHYGbduringfruitripeningPlantandCellPhysiology2017582155mdash2165[59]LuoZZhangJLiJetalASTAYGGREENproteinSlSGR1regulateslycopeneandbetaGcaroteneaccumulationbyinteractingdirectly
withSlPSY1duringripeningprocessesintomatoNewPhytologist2013198442mdash452[60]ToledoGOrtizGHuqERodriguezGConcepcionMDirectregulationofphytoenesynthasegeneexpressionandcarotenoidbiosynthesisby
phytochromeGinteractingfactorsProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica201010711626mdash
11631[61]WelschRMaassDVoegelTetalTranscriptionfactorRAP22anditsinteractingpartnerSINAT2Stableelementsinthe
carotenogenesisofArabidopsisleavesPlantPhysiology20071451073mdash1085[62]EndoTFujiiHSugiyamaAetalOverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor (CubHLH1)whichis
homologoustoArabidopsisactivationGtaggedbri1suppressor1interactingfactorgenesmodulatescarotenoidmetabolismintransgenictomatoPlantScience201624335mdash48
[63]LiuLJiaCZhang MetalEctopicexpressionofaBZR1G1DtranscriptionfactorinbrassinosteroidsignallingenhancescarotenoidaccumulationandfruitqualityattributesintomatoPlantBiotechnologyJournal201412105mdash115
[64]CazzonelliCICuttrissAJCossettoSBetalRegulationofcarotenoidcompositionandshootbranchinginarabidopsisbyachromatinmodifyinghistonemethyltransferaseSDG8PlantCell20092139mdash53
[65]AlvarezDVossBMaassDetalCarotenogenesisisregulatedby51049011UTRGmediatedtranslationofphytoenesynthasesplicevariantsPlantPhysiology20161722314mdash2326
[66]KaurSSpillaneCReductionincarotenoidlevelsinthemarinediatomPhaeodactylumtricornutum byartificialmicroRNAstargetedagainsttheendogenousphytoenesynthasegeneMarineBiotechnology2015171mdash7
[67]BaiCRiveraSMMedinaVetalAninvitrosystemfortherapidfunctionalcharacterizationofgenesinvolvedincarotenoidbiosynthesisandaccumulationPlantJournal201477464mdash475
[68]KimSHAhnYOAhnMJetalCloningandcharacterizationofanOrangegenethatincreasescarotenoidaccumulationandsaltstresstoleranceintransgenicsweetpotatoculturesPlantPhysiologyandBiochemistry201370445mdash454
[69]ZhouXWelschRYang YetalArabidopsisORproteinsarethemajorposttranscriptionalregulatorsofphytoenesynthaseincontrollingcarotenoidbiosynthesisProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica20151123558mdash
3563[70]WelschRZhouXYuanHetalClpproteaseandORdirectlycontroltheproteostasisofphytoenesynthasethecrucialenzymefor
carotenoidbiosynthesisinArabidopsisMolecularPlant201811149mdash162
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[71]PulidoPToledoGOrtizGPhillipsMAetalArabidopsisJGProteinJ20deliversthefirstenzymeoftheplastidialisoprenoidpathwaytoproteinqualitycontrolPlantCell2013254183mdash4194
[72]PrasannaVPrabhaTNTharanathanRNFruitripeningphenomenamdashAnoverviewCriticalReviewsinFoodScienceandNutrition
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BiotechnologyandBiochemistry201478231mdash237[77]VrebalovJPanILArroyoAJMetalFleshyfruitexpansionandripeningareregulatedbythetomatoSHATTERPROOFgene
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viniferaL)andtheproposedroleofauxinconjugationduringripeningJournalofExperimentalBotany2010613615mdash3625[82]SuLDirettoGPurgattoEetalCarotenoidaccumulationduringtomatofruitripeningismodulatedbytheauxinGethylenebalance
BMCPlantBiology201515[83]WengLZhaoFLiRetalThezincfingertranscriptionfactorSlZFP2negativelyregulatesabscisicacidbiosynthesisandfruitripening
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2011157188mdash199[85]CreelmanRAMulletJEBiosynthesisandactionofjasmonatesinplantsAnnualReviewofPlantPhysiologyandPlantMolecular
Biology199748355mdash381[86]LiTXuYZhangLetalThejasmonateGactivatedtranscriptionfactorMdMYC2regulatesETHYLENERESPONSEFACTORand
ethylenebiosyntheticgenestopromoteethylenebiosynthesisduringapplefruitripeningPlantCell2017291316mdash1334[87]RudellDRMattheisJPFanXetalMethyljasmonateenhancesanthocyaninaccumulationandmodifiesproductionofphenolicsand
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ExperimentalBotany2012635751mdash5761
DuanXuewu
ProfDuanXuewureceivedhisPhDdegreefromtheGraduateSchoolof
ChineseAcademyofSciencesin2004Heiscurrentlyaprofessorof
South China Botanical GardenChinese Academy ofSciencesHis
researchinterestsincludebiochemistryandmolecularbiologyinrelation
to ripeningsenescence and deterioration of postharvestfruits and
vegetablesespeciallytranscriptionalregulationandposttranscriptional
modificationanddevelopmentofstorageandhandlingtechniquesin
subtropicalandtropicalfruitHewasthePrincipalInvestigatorofmore
than20projectsfromthegovernmentUptonowhehaspublishedmorethan90papersandhasbeen
patented29inventionpatentsincludinganUSApatent
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SCIENCEFOUNDATIONINCHINA Vol26No12018 57
CitrusisoneofthemosteconomicallyimportantediblefruitsworldwidewiththemostdiversecarotenoidcompositionMostcultivatedcitrusesarenaturalorartificialhybridsoffourcoreancestralspeciescitronpummelomandarine and papeda The commercially important cultivated citrusinclude orangegrapefruitmandarinandlemonCarotenoidaccumulationvariesgreatlyin differentcitrusspeciesMandarinand orangeaccumulate primarily βGcryptoxanthin and violaxanthinwhile grapefruitandpummeloarerichinphytoenephytoflueneandlycopene[17182728]Inadditionlemonandlimecontainlowlevelsofcarotenoids[18]
TomatohasbeenwidelyusedasamodelfruittoresearchcarotenoidmetabolismTomatofruitdisplaysdiversecolorvariationwhichisattributedbythedifferentialcarotenoidaccumulationRedtomatomainlycontainslycopeneaccountingforupto90ofthetotalcarotenoids[24]SomemutanttomatofruitswithdiversecolorsarecharacterizedbyabnormalcarotenoidbiosynthesisForexampleorangetmutant[29]orangeredDeltamutant[30]andorangeBeltamutantfruit[31]accumulateprimarilyproGlycopeneδGcaroteneandβGcarotenerespectively
PapayaisanimportantcommercialfruitcultivatedintropicalandsubtropicalareasandisrichincarotenoidThecompositionsofcarotenoidinpapayadeterminethefruitcolorYellowGfleshedpapayavarietyaccumulatesmainlyβGcryptoxanthinandβGcarotenewhileredGfleshedcultivarmainlylycopene[23]
SimilartopapayadifferentcarotenoidcompositionsgivepepperfruitdiversecolorsRedpeppercontainsthehighestcarotenoidcontentamongallthecommonediblefruitswiththecontentofupto1100μgg-1fwThepredominantcarotenoidsinredpepperarecapsanthin[32]YellowpepperarerichinluteinandαGorβGcarotenewhileorangepeppercontainsprimarilycapsanthinluteinandorβGcarotene[3334]
Watermelonisoneofthe mostpopularfruitsinthe worldFleshcoloristheimportanttraitofwatermelonCarotenoidsareresponsiblefordiversecolorsin watermelonfruit [25]RedGfleshedwatermelonsconsistedprimarilyoflycopenewithasmallamountofphytoenephytoflueneζGcaroteneαGcaroteneluteinzeaxanthinandviolaxanthin[25]whileviolaxanthinandluteinconstitutethemajorcarotenoidsinorangeGfleshedwatermelon[2526]
3 Biosynthesisofcarotenoids
Inhigherplantscarotenoidsaresynthesizedinvarioustypesofplastidsincludingproplastidsetioplastschloroplastsamyloplastsandchromoplasts[35]ThecarontenoidbiosynthesispathwayhasbeenwellestablishedwhichinvolvesthreeimportantprocessesbiosynthesisofprecursorformationoflinearchaincarotenoidsandcyclizationoflycopeneThegenesandenzymesinvolvedintheseprocessesforplantsareillustratedinFigure1Alargenumberofgenesfromfruitsinrelationtocarotenoidbiosynthesisandregulationalsohavebeenclonedandcharacterized
Thebiosynthesisofcarotenoidsdependsonthesupplyoftwobasicbuildingblocksofcarotenoidsisopentenyldiphosphate(IPP)anddimethylallyldiphosphate(DMAPP)[6]whichareproducedvia2CGmethylGDGerythritolG4Gphosphate(MEP)pathwaySevenenzymesareinvolvedinMEPpathwayincluding1GdeoxyxyluloseG5Gphosphatesynthase(DXS)1GdexoyGDGxylulose5Gphosphatereductoisomerase(DXR)MEPcytidylyltransferase(MCT)4G(cytidine51049011Gdiphospho)G2GCGmethylGDGerythritol(CDPGME)kinase(CMK)2GCGmethylGDGerythritol24Gcyclodiphosphate (MECDP)synthase (MDS)(e)G4GhydroxyG3GmethylbutG2GenG1Gyldiphosphate(HMBPP)synthase(HDS)and HMBPPsynthasereductase (HDR)[36]ThefirststepinMEPpathwayisregulatedbyDXSarateGlimitingenzymeincarotenogensisTheoverexpressionofDXSenhancescarotenoidaccumulationin ArabidopsiswhilethemutationofDXSresultsinnocarotenoidaccumulation[37]AnotherkeyregulatorystepisHDRthelastenzymeinMEPpathwaywhichcatalyzestheproductionofIPP[38]IPPisisomerizedtoDMAPPviaIPPisomeraseIPPandDMAPPundergocondensationreactionsgeneratingthemajorcarotenoidprecursorgeranylgeranyldiphosphate (GGPP)Thereactionsarecatalyzed byisopentenyldiphosphateisomerase (IPI)and
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58 Vol26No12018 SCIENCEFOUNDATIONINCHINA
Figure1 BiosynthesisandregulationofcarotenoidsinplantsThegreyrectanglesrepresentthesubstratesandmetabolitesinthecarotenoid biosynthesispathwayTheblueellipsesrepresenttheenzymesandtheirgenesinvolvedincarotenoidbiosynthesisThegreenellipsesrepresenttranscriptionfactorsregulatingcarotenoidbiosynthesisTheredellipsesrepresentproteinsinvolvedintheposttranscriptionalregulationofcarotenoidbiosynthesisTheyellowellipsesrepresenttheproteinsinvolvedinepigeneticmodificationofcarotenoidbiosynthesisThepurpleellipsesrepresentmiRNAinvolvedintheregulationofcarotenoidbiosynthesisBCHnonGhemeβGcarotenehydroxylaseCDPGME4G(cytidine51049011Gdiphospho)G2GCGmethylGDGerythritolCDPGME2P2GphosphoG4G(cytidine51049011Gdiphospho)G2GCGmethylGDGerythritolCMKCDPGMEkinaseCRTISOcarotenoidisomerase CYP97A and CYP97Ccytochrome P450Gtype monooxygenase 97C DMAPPdimethylallyldiphosphateDXPdeoxyGDGxylulose5GphosphateDXR1GdexoyGDGxylulose5GphosphatereductoisomeraseDXS1GdeoxyxyluloseG5GphosphatesynthaseG3Pglyceraldehyde3GphosphateGGPPgeranylgeranyldiphosphateGGPPSGGPPsynthaseHDRHMBPPreductaseHDSHMBPPsynthaseHMBPP(e)G4GhydroxyG3GmethylbutG2GenG1GyldiphosphateIPIisopentenyldiphosphateisomeraseIPPisopentenyldiphosphateLCYBlycopeneβGcyclaseLCYElycopeneεGcyclaseMCTMEPcytidylyltransferaseMDSMECDPsynthaseMECDP2CGmethylGDGerythritol24GcyclodiphosphateMEP2CGmethylGDGerythritolG4Gphosphate NSY Neoxanthin synthasePDSphytoene desaturasePSYphytoenesynthaseVDEviolaxanthindeGepoxidaseZDSζGcarotenedesaturaseZEPzeaxanthinepoxidaseZGISOζGcaroteneisomerase
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SCIENCEFOUNDATIONINCHINA Vol26No12018 59
geranylgeranyldiphosphate(GGPP)synthase(GGPPS)[39]ThecondensationoftwoGGPPmoleculescatalyzedbyphytoenesynthase(PSY)formsuncolored15Gcis
phytoenethefirstcarotenoidproductThisstepisregardedasthemostimportantregulatorystepincarotenoidbiosynthesis[39]TomatocontainsthreePSYgenesPSY1PSY2andPSY3whichexhibittissueGspecificexpressionmainlyinfruitinpetalandinrootrespectivelyDuringtomatoripeningtheaccumulationofcarotenoidcorrelateswiththeexpressionofPSY1 [4041]TransgenictomatobyantisenseinhibitionofPSY1producesonly3ofthecarotenoidinwildtypewildtypefruit[42]SimilarresultsregardingtherelationshipbetweenupregulatedexpressionofPSYgenesandincreasedcarotenoidaccumulationhavebeenreportedinalargenumberoffruitssuchascitrus[43]pepper[34]persimmon[44]loquat[12]watermelon [25]andbanana[45]Uncoloredphytoenethenundergoesaseriesofdesaturationandisomerizationreactionsto generateredGcolored allGtransGlycopenethe predominatepigmentinredtomatoand watermelonfruitsThesereactionsaresequentiallycatalyzedbyphytoenedesaturase(PDS)ζGcarotenedesaturase(ZDS)ζGcaroteneisomerase(ZGISO)andcarotenoidisomerase(CRTISO)[39]
Downstreaminthecarotenoidbiosynthesispathwaythecyclizationoflycopeneislocatedatthebranchingpointofthepathwaywhichproduceaseriesofcarotene(Figure1)[6739]ThecyclizationoflycopeneinvolvestwoenzymeslycopeneβGcyclase(LCYB)andlycopeneεGcyclase(LCYE)LCYBcatalyzesatwoGstepreactiontoproduceβGcarotenewithtwoβGringsAεGringandaβGringaresequentiallyaddedtolycopeneformingαGcarotene(βεGcarotene)whichiscatalyzedbyLCYEandLCYBFollowingthecyclizationoflycopeneαGcaroteneandβGcarotenearesubjectedtohydroxylationandepoxidationformingaseriesofxanthophylls[6739]TheαGcaroteneissequentiallycatalyzedbytwohydroxylasesCYP97A and CYP97CgeneratingluteinthefinalproductofαGbranchincarotenoid biosynthesispathwayβGcaroteneundergoestwostepsofhydroxylationandtwostepsofepoxidationcatalyzedbyβGcarotenehydroxylase (BCH)andzeaxanthinepoxidase (ZEP)sequentiallyformingβGcryptoxanthinzeaxanthinantheraxanthinandviolaxanthin[6739]Theconversionofviolaxanthinintoneoxanthinbyneoxanthinsynthase(NXS)completesthecorebiosynthesispathway[46]
4 Transcriptionalregulationofcarotenoidbiosynthesis
41 TranscriptionfactorTranscriptionalregulationplaysavitalroleinfruitdevelopmentandripeningaswellasabioticstresses
ItiswellknownthattranscriptionfactorsareinvolvedintranscriptionregulationofstructureandfunctiongenesincarotenoidbiosynthesispathwayAlthoughthegenesinvolvedinthebiosynthesisofcarotenoidbiosynthesishavebeenidentifiedandcharacterizedfromvariousfruits(Figure1)onlyafewtranscriptionfactorshavebeendemonstratedtodirectlyregulatetheexpressionofthesefunctiongenesinthepathwayThetranscriptionalcontrolofcarotenoidaccumulationhasbeenmostlystudiedintomatoduringripeningThesetranscriptionfactorsinclude RINR2R3GMYBNACSGR1PIF1RAP22EIN3etcHowevermostofthesetranscriptionfactorsexertbroadeffectsonfruitripeningieethylenesynthesisfruitsofteningcolorformationaromaandflavorproductionandareunlikelytobespecificregulatorsofcarotenoidbiosynthesis
RIPENINGGINHIBITOR (RIN)isa memberoftranscriptionfactorfamilycontaining MADSGboxwhichplaysanessentialroleinfruitripeningasaglobalmasterregulator[47]MarteletalreportedthatRINinteractswithSlPSY1thespecificPSYgeneassociatedwithcarotenoidbiosynthesisintomato[48]FujisawaetalidentifiedanumberofRINGtargetedgenesincarotenoidbiosynthesispathwaybychromatinimmunoprecipitationcoupled with DNA microarrayanalysisandfoundthatRIN regulatescarotenoidaccumulationviapositivelyregulatingPSY1ZISOandCRTISOinadirectmanneraswellaspositivelycontrollingZDSandnegativelyregulatingLYCBandLYCEbyanindirecteffectintomatofruit[49]
VGmybmyeloblastosisviraloncogenehomolog(MYB)proteinsbelongtoalargefamilyoftranscriptionfactorsinplantsThemajorityofMYBareR2R3GMYBsubfamilywithtworepeatsinitsMYBdomain
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60 Vol26No12018 SCIENCEFOUNDATIONINCHINA
TheR2R3GMYBTFsplaykeyrolesinregulatingplantGspecificprocessesincludingprimaryandsecondarymetabolismgrowthanddevelopmentandresponsetoabioticandbioticstresses [50]IncitrusCrMYB68an R2R3GMYBtranscriptionalfactorcandirectlybindandnegativelyregulateCrBCH2resultinginthedelayinthetransformationofαGandβGcaroteneandtheinhibitionofpeeldeGgreeningincitrus[51]SimilarlySagawaetalidentifiedanR2R3GMYBtranscriptionfactorReducedCarotenoidPigmentation1(RCP1)whichpositivelyregulatescarotenoidbiosynthesisduringMimuluslewisiiflowerdevelopmentLossGofGfunctionmutationsinRCP1resultindownGregulationofallcarotenoidbiosyntheticgenesandreducecarotenoidcontentwhileoverexpressionofthisgeneinthercp1 mutantbackgroundrestorescarotenoidproduction[52]Thereforeinadditiontoregulatinganthocyanins[53]R2R3GMYBisalsoinvolvedintheregulationofcarotenoidbiosynthesisinfruits
NAMATAF12andCUC2 (NAC)transcriptionfactorsareoneofthelargestfamiliesofplantGspecifictranscription factors which areimplicated in plant growth and developmentflavonoidbiosynthesiswoodformationandstressresponses [54]TheroleofNACtranscriptionfactorsinregulatingfruitripeningandsenescencehasbeenreportedintomato[55]banana[56]andlitchi[54]IntomatoSlNAC1and SlNAC4 positivelyregulatetomatofruitripeningbutexhibitdifferentialcharacteristicsAntisensesuppression ofSlNAC1 resultsin delayed ethylene production andfruitripeningbuthigherlevelsofethylenebiosynthesisandaccumulationoftotalcarotenoidandlycopeneaccompaniedbyupGregulatedexpressionofgenesrelatedtolycopeneandethylenebiosynthesis [55]DifferentfromSlNAC1reducedexpressionofSlNAC4byRNAinterference(RNAi)intomatodelayedfruitripeningdecreasedethylenesynthesisandreducedcarotenoidsbyalteringcarotenoidpathwayflux[57]AdditionallyFuetalreportedthatpapayaCpNAC2actsasatranscriptionalactivatorofCpPDS24CpZDSCpLCYGeandCpCHYGb by directly bindingtotheirpromotersand promotestheirtranscription[58]
SomeothertranscriptionfactorshavealsobeenreportedtobeinvolvedinthetranscriptionalregulationofstructuregenesinthecarotenoidbiosynthesispathwayIntomatoSlSGR1aSTAYGGREENproteinphysicallyinteracts with PSY1 to suppress PSY1 expressionthus negatively regulatinglycopeneproductionduringfruitripening[59]PhytochromeGinteractingfactor1downGregulatetheaccumulationofcarotenoidbybindingtothepromoterofPSYandrepressingPSYexpressioninArabidopsisseedlings[60]SimilarlyAtPAP22amemberoftheAPETALA2 (AP2)ethyleneGresponsiveelementGbindingproteintranscriptionfactorfamilydirectlybinds withthepromotersofPSY andPDS toregulatecarotenoidbiosynthesisinArabidopsis [61]PapayaCpEIN3aanethyleneresponsivefactordirectlybindswiththepromotersofCpPDS4andCpCHYGbandpromotestheirtranscription[58]InadditionoverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor(CrbHLH1)intomatolowerslycopeneaccumulationanddownGregulatecarotenoidbiosyntheticgeneexpressionintomatofruit[62]EctopicexpressionofanArabidopsisBZR1G1Dtranscriptionfactorinbrassinosteroidsignalingenhancescarotenoidaccumulationandfruitqualityattributesintomato[63]42 Epigeneticmodification
EpigeneticmodificationincludingthemethylationofDNACpGislandsandthemodificationofhistonesthatassociatedwithDNAinchromosomesplayaveryimportantroleinregulatinggeneexpressionEpigeneticmodification possiblyisimplicatedinregulation ofcarotenoid biosynthesis (Figure1)Cazzonellietalreportedahistonemethyltransferaseenzyme(SET DOMAIN GROUP8SDG8)thatmethylateshistoneH3onLys4andor36(H3K4andH3K36)inArabidopsisthalianawhichisrequiredforexpressionofCRTISOgeneMutationofSDG8resultsindownGregulatedexpressionofCRTISOgeneimpairedlutein biosynthesis andincreased shoot branchingThis wasthefirstreportregardinginvolvementofepigeneticmodificationinregulationofcarotenoidbiosynthesis[64]43 AlternativeRNAsplicing
AlternativeRNAsplicingisanimportantregulationofgeneexpressioninhighereukaryotesRecentlyAlvarezetalfoundthatalternativesplicingofPSYisimplicatedinregulationofcarotenogenesisinArabidopsisArabidopsispredominantlypossessasinglePSYgenewithtwoalternativesplicevariants
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(ASV)inlength andintheexonintronretention oftheir51049011UTRsASV1 with along 51049011UTR(untranslatedregion)isinvolvedindevelopmentallyregulatedcarotenoidformationwhileASV2withashort51049011UTRispreferentiallyinduced whenanimmediateincreaseinthecarotenoidpathwayfluxisrequired[65]44 microRNAs
MicroRNAs(miRNAs)arekeyregulatorsofgeneexpressionineukaryotesandplayapivotalroleintheregulationofvariousbiologicalaswellas metabolicprocessesInterestinglyanartificialmaturemicroRNAs (amiRNAs)successfullytargetedthe PSY mRNA andreduced PSY mRNA levelinPhaeodactylumtricornutumwhichfurtherreducedthelevelsofcarotenoidsinthePtricornutumamiRNAknockdownlines[66]ItwasspeculatedthatmiRNApossiblyisinvolvedinthetranscriptionregulationofcarotenoidbiosynthesisinplants
5 PostGtranscriptionalregulationofcarotenoidsbiosynthesis
InadditiontotranscriptionregulationofstructuregenesinvolvedinthecarotenoidpathwayrecentstudieshaverevealedotherregulatorymechanismstocontrolbiosyntheticenzymelevelsandactivitiesinplantssuchaspostGtranscriptionalregulation (Figure1)Theseregulatory mechanismspossiblyarepresentduringfruitdevelopmentandripening
ORANGE(OR)isaplastidGlocalizedproteincarryingacysteineGrichzincfingerdomainPreviousstudiedshowedthatORpromotescarotenoidaccumulationincalliofrice[67]andsweetpotato [68]FurtherZhouetalfoundthatArabidopsisORandPSYphysicallyinteractwitheachotherinplastidsresultingin minimaleffecton expression ofPSY gene [69]Howeveroverexpression of AtORsignificantlyincreasedtheamountofenzymaticallyactivePSYwhereasanatoratorGlikedoublemutantexhibitsadramaticallyreducedPSYlevelTheresultrevealedanovelmechanismunderlyingregulationofcarotenoidbiosynthesisviaposttranscriptionalmodificationofPSYinplants[69]
Inanotherimportantliterature on postGtranscriptionalregulation Welsch et alreported thatdegradationmodificationofproteinincarotenoidbiosynthesispathwayisimplicatedinregulationofcarotenoidbiosynthesisClpproteasesystemthemostabundantandcomplexsolubleproteasesystemintheplastidwasshowntotargetPSYTheabsenceofCLPC1CLPP4andCLPR1G2enhancedthelevelsofactivePSYandseveralothercarotenogenicenzymes[70]ThereforeORproteincounterbalancesClpGmediatedproteolysisinmaintainingPSYproteinhomeostasis
Theauthors1049011researchteamalsodiscoveredanindirectlypostGtranscriptionalregulatorymechanismtoregulateexpressionofPSYgeneinbananafruitSulfoxidationofproteinsbyreactiveoxygenspeciescancauseconformationalalterationorfunctionalimpairmentswhichcouldbereversedby Metsulfoxidereductase(Msr)ItwasfoundthatCaM1isasubstrateofMaMsrA7anditssulforxidationisrepairedbyMaMsrA7MaHY5G1actingasatranscriptionalrepressorofMaPSY1MaPSY2andMaPSY3inbananafruitisa CaMGbindingproteinSulfoxidationregulationof MaCaM1 by MaMsrA7altersexpressionofMaPSY1MaPSY2andMaPSY3genesbymodifyingMaHY5G1transcriptionalactivity(nopublisheddata)
TwootherproteinsalsohavebeenreportedtoberelatedtoposttranscriptionalregulationofcarotenoidbiosynthesisSlSGR1atomatoSTAYGGREENproteinregulateslycopeneaccumulationduringtomatofruitripeningviadirectinteractionwithPSY1[59]AnotherexampleisthepostGtranslationalregulationofDXSJGproteinJ20 (chaperoneproteindnaJ20)interactsdirectlywithDXSregulatingDXSproteinlevelandactivitybyidentifyingunfoldedormisfolded(damaged)formsofDXSandtargetingthemtotheHsp70systemforproperfoldingundernormalconditionsordegradationuponstress[71]
6 Hormonalregulationofcarotenoidbiosynthesis
Fruitripeningisacomplexandgeneticallyprogrammedprocesswhichinvolvesaseriesoforganolepticphysiologicaland biochemical changesresulting in the development of edible quality [72]
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62 Vol26No12018 SCIENCEFOUNDATIONINCHINA
PhytohormonesplaycrucialrolesinfruitripeningwhichhasbeenshowntoaffectcarotenoidaccumulationinfruitsMajorprogressregardingtheinvolvementofphytohormonesinregulatingcarotenoidbiosynthesishasbeenachievedinfruits
Ethyleneplaysa centralrolein climactericfruitripeningTherole ofethylenein carotenoidaccumulationinclimactericfruitshasbeenwidelystudiedIntomatoethyleneinitiatesfruitripeningresultinginarapidcolorshiftfromgreentoredwithincreasedlycopeneaccumulationanddecreasedβGxanthophyllsandchlorophyllscontentsTheroleofethyleneinregulatingcarotenoidbiosynthesisduringtomatofruitripeninginvolvesacomplexregulatorynetworkoftranscriptionfactorsRINasamasterregulatorbindstothepromotersofgenesinvolvedinfruitripeningprocessesincludingcarotenoidbiosynthesis[484973]APETALA2a(AP2a)isamemberofAP2ERFsuperfamilywhichregulatestomatofruitripeningbyregulatingethylenebiosynthesisandsignalingRepressionofAP2abyRNAinterference (RNAi)resultsin decreasedlevels ofphytoeneandlycopenebut higherβGcaroteneaccumulationconsistentwithdownGregulatedexpressionofPDSCtRGb2andCtrlSOandupGregulatedexpressionofZEP1MoreoverseveralripeningGrelatedregulatorsRIPENINGGINHIBITOR (RIN)NONGRIPENING (NOR)andCOLORLESSNONGRIPENING (CNR)functionupstreamofAP2aandpositivelyregulateitsexpression[74]SlERF6anothermemberofAP2ERFsuperfamilyisanegativeregulatorofcarotenoidaccumulationReducedexpressionofSlERF6byRNAienhancedbothcarotenoidandethylenelevelsduringfruitripening[75]InadditionthreeothertranscriptionfactorsarerelatedtotheethylenepathwayincludingTAGL1FRUITFULL1and2whichhavebeenreportedtopositivelyregulatecarotenoidaccumulationduringtomatoripening[76mdash78]
Auxinisinvolvedincellexpansionanddivisiontissuedifferentiationorgandevelopmentandarangeofphysiologicalprocess[79]Recentlyincreasingevidencesshowthatauxinalsoplaysanimportantroleinregulatingfruitripening[80]TheleveloffreeIAA (themostabundantauxin)tendstodeclinepriortotheonsetoftomatofruitripening[81]AuxinnegativelycontrolscarotenoidaccumulationintomatofruitExogenousIAA treatmentsignificantlyreduceslycopeneaccumulationbutenhancesthelevelsofneoxanthinandviolaxanthinaccompaniedbydownGregulatedexpressionofPsy1Psy3PdsZisoandCrtisoandupGregulatedexpressionofβGLcy1andCrtrGβ1 [82]Howeverwhetherauxindirectlyregulatesthegenesincarotenoidpathwayremainsunknown
Abscisicacid (ABA)isa key hormoneinvolvedintuningresponsestoabioticstressesLittleinformationisavailableabouttheinvolvementofABAinregulatingcarotenoidaccumulationduringtomatofruitripeningABA hasbeenreportedto beimplicatedinfruitripeningandinfluencecarotenoidaccumulationintomato[83]andstrawberry[84]fruit
JAssuchasmethyljasmonicacidjasmonicacidandotherderivativesareplantendogenoushormones[85]JAsalsoplayimportantrolesinfruitripeningLietalreportedthatJAinduceethyleneproductionbyMdMYC2GmediatedandMdERF3GmediatedupregulationofMdACS1gene[86]Applicationofmethyljasmonate(MeJA)increasestheaccumulationofanthocyaninβGcarotenecontentsandseveralphenoliccompounds[87]LiuetalfurtherilluminatedtheroleofJAinregulatingcarotenoidaccumulationduringtomatofruitripeningwithJAGdeficientmutants(spr2anddef1)anda35∷prosystransgenicline(35∷prosyswithincreasedJAlevelsandconstitutiveJAsignaling)andfoundthatlycopeneaccumulationissignificantlyinhibitedinspr2anddef1fruitbutenhancedin35S∷prosysfruitaccompaniedbyasimilartrendofexpressionoflycopenebiosyntheticgenes[88]Inadditionethyleneproductionisdepressedinspr2anddef1fruitbutincreasedin35S∷prosysfruitMoreovertheexogenousapplicationofMeJAtoNeverripe (Nr)an ethyleneGinsensitive mutantresultsin enhancedlycopene accumulation andexpressionoflycopenebiosyntheticgenes [88]TheseresultsindicatedthatJA promoteslycopenebiosynthesisinamannerindependentofethylene
7 Futureresearchdirections
CarotenoidmetabolismandregulationhavebeenwidelyresearchedinplantsHoweverthecarotenoidG
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relatedstudieshavebeenmostlyfocusedonmodelspeciessuchasArabidopsisandtomatoThemolecularmechanismsunderlyingcarotenoid metabolism andregulationin otherfruitspeciesarestillpoorlyunderstoodConsideringthediversityofcarotenoidsinfruitsitisnecessarytoinvestigatethenovelgenesandregulationmechanismsrelatedtocarotenoidbiosynthesisinplants
Carotenoid accumulation is cooperatively controlled at multiple levelsincluding developmentalprogramsenvironmentalfactorsand metabolicsignalsTranscriptionfactorsplayimportantroleinregulatingcarotenoidbiosynthesisHoweveronlyafewtranscriptionfactorsinvolvedincarotenoidbiosynthesisareidentifiedandtranscriptionregulationismainlyrelatedtoexpressionofPSYMoreovermostofthesetranscriptionfactorsexerttheirinfluencesviaregulatingfruitripeningnotspecificcarotenoidbiosynthesisGrelated genesTheinteracting partners oftranscriptionfactorsinvolvedincarotenoidmetabolicnetworkalsoremaintobeidentifiedPostGtranscriptionalregulationalternativeRNAsplicingepigeneticmodificationandmiRNAareofimportanceinplantgrowthanddevelopmentandresponsetoabioticstressHoweverlittleinformationregardingtheinvolvementofthesemechanismsinregulating carotenoid metabolism in planteven in Arabidopsisis available Application ofphytohormonescontributestoregulatecarotenoidcontentand maintainfruitqualityinagricultureandpostharvesttreatmentThemechanismunderlyingregulationofcarotenoidmetabolismbyphytohormonesespeciallycrossGtalkamongdifferentphytohormonesarestillfarfrombeingunderstoodInthefuturestudiesbetterunderstandingofcarotenoid metabolismandregulationinfruitswillnotonlyhaveanimportantimpactongeneticimprovementandpostharvesttreatmentbutalsowillstrengthenknowledgeofcarotenoidregulationinplants
Acknowledgements
ThisworkwassupportedbytheNationalNaturalScienceFoundationofChina(GrantNos3177204131322044and31501545)ScienceandTechnologyPlanningProjectofGuangdongProvince(GrantNo2015B090901058)ScienceandTechnologyPlanningProjectofGuangzhou (GrantNo201604020048)andTalentProgramofGuangdongProvince(No2014TX01N049)
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DuanXuewu
ProfDuanXuewureceivedhisPhDdegreefromtheGraduateSchoolof
ChineseAcademyofSciencesin2004Heiscurrentlyaprofessorof
South China Botanical GardenChinese Academy ofSciencesHis
researchinterestsincludebiochemistryandmolecularbiologyinrelation
to ripeningsenescence and deterioration of postharvestfruits and
vegetablesespeciallytranscriptionalregulationandposttranscriptional
modificationanddevelopmentofstorageandhandlingtechniquesin
subtropicalandtropicalfruitHewasthePrincipalInvestigatorofmore
than20projectsfromthegovernmentUptonowhehaspublishedmorethan90papersandhasbeen
patented29inventionpatentsincludinganUSApatent
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58 Vol26No12018 SCIENCEFOUNDATIONINCHINA
Figure1 BiosynthesisandregulationofcarotenoidsinplantsThegreyrectanglesrepresentthesubstratesandmetabolitesinthecarotenoid biosynthesispathwayTheblueellipsesrepresenttheenzymesandtheirgenesinvolvedincarotenoidbiosynthesisThegreenellipsesrepresenttranscriptionfactorsregulatingcarotenoidbiosynthesisTheredellipsesrepresentproteinsinvolvedintheposttranscriptionalregulationofcarotenoidbiosynthesisTheyellowellipsesrepresenttheproteinsinvolvedinepigeneticmodificationofcarotenoidbiosynthesisThepurpleellipsesrepresentmiRNAinvolvedintheregulationofcarotenoidbiosynthesisBCHnonGhemeβGcarotenehydroxylaseCDPGME4G(cytidine51049011Gdiphospho)G2GCGmethylGDGerythritolCDPGME2P2GphosphoG4G(cytidine51049011Gdiphospho)G2GCGmethylGDGerythritolCMKCDPGMEkinaseCRTISOcarotenoidisomerase CYP97A and CYP97Ccytochrome P450Gtype monooxygenase 97C DMAPPdimethylallyldiphosphateDXPdeoxyGDGxylulose5GphosphateDXR1GdexoyGDGxylulose5GphosphatereductoisomeraseDXS1GdeoxyxyluloseG5GphosphatesynthaseG3Pglyceraldehyde3GphosphateGGPPgeranylgeranyldiphosphateGGPPSGGPPsynthaseHDRHMBPPreductaseHDSHMBPPsynthaseHMBPP(e)G4GhydroxyG3GmethylbutG2GenG1GyldiphosphateIPIisopentenyldiphosphateisomeraseIPPisopentenyldiphosphateLCYBlycopeneβGcyclaseLCYElycopeneεGcyclaseMCTMEPcytidylyltransferaseMDSMECDPsynthaseMECDP2CGmethylGDGerythritol24GcyclodiphosphateMEP2CGmethylGDGerythritolG4Gphosphate NSY Neoxanthin synthasePDSphytoene desaturasePSYphytoenesynthaseVDEviolaxanthindeGepoxidaseZDSζGcarotenedesaturaseZEPzeaxanthinepoxidaseZGISOζGcaroteneisomerase
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geranylgeranyldiphosphate(GGPP)synthase(GGPPS)[39]ThecondensationoftwoGGPPmoleculescatalyzedbyphytoenesynthase(PSY)formsuncolored15Gcis
phytoenethefirstcarotenoidproductThisstepisregardedasthemostimportantregulatorystepincarotenoidbiosynthesis[39]TomatocontainsthreePSYgenesPSY1PSY2andPSY3whichexhibittissueGspecificexpressionmainlyinfruitinpetalandinrootrespectivelyDuringtomatoripeningtheaccumulationofcarotenoidcorrelateswiththeexpressionofPSY1 [4041]TransgenictomatobyantisenseinhibitionofPSY1producesonly3ofthecarotenoidinwildtypewildtypefruit[42]SimilarresultsregardingtherelationshipbetweenupregulatedexpressionofPSYgenesandincreasedcarotenoidaccumulationhavebeenreportedinalargenumberoffruitssuchascitrus[43]pepper[34]persimmon[44]loquat[12]watermelon [25]andbanana[45]Uncoloredphytoenethenundergoesaseriesofdesaturationandisomerizationreactionsto generateredGcolored allGtransGlycopenethe predominatepigmentinredtomatoand watermelonfruitsThesereactionsaresequentiallycatalyzedbyphytoenedesaturase(PDS)ζGcarotenedesaturase(ZDS)ζGcaroteneisomerase(ZGISO)andcarotenoidisomerase(CRTISO)[39]
Downstreaminthecarotenoidbiosynthesispathwaythecyclizationoflycopeneislocatedatthebranchingpointofthepathwaywhichproduceaseriesofcarotene(Figure1)[6739]ThecyclizationoflycopeneinvolvestwoenzymeslycopeneβGcyclase(LCYB)andlycopeneεGcyclase(LCYE)LCYBcatalyzesatwoGstepreactiontoproduceβGcarotenewithtwoβGringsAεGringandaβGringaresequentiallyaddedtolycopeneformingαGcarotene(βεGcarotene)whichiscatalyzedbyLCYEandLCYBFollowingthecyclizationoflycopeneαGcaroteneandβGcarotenearesubjectedtohydroxylationandepoxidationformingaseriesofxanthophylls[6739]TheαGcaroteneissequentiallycatalyzedbytwohydroxylasesCYP97A and CYP97CgeneratingluteinthefinalproductofαGbranchincarotenoid biosynthesispathwayβGcaroteneundergoestwostepsofhydroxylationandtwostepsofepoxidationcatalyzedbyβGcarotenehydroxylase (BCH)andzeaxanthinepoxidase (ZEP)sequentiallyformingβGcryptoxanthinzeaxanthinantheraxanthinandviolaxanthin[6739]Theconversionofviolaxanthinintoneoxanthinbyneoxanthinsynthase(NXS)completesthecorebiosynthesispathway[46]
4 Transcriptionalregulationofcarotenoidbiosynthesis
41 TranscriptionfactorTranscriptionalregulationplaysavitalroleinfruitdevelopmentandripeningaswellasabioticstresses
ItiswellknownthattranscriptionfactorsareinvolvedintranscriptionregulationofstructureandfunctiongenesincarotenoidbiosynthesispathwayAlthoughthegenesinvolvedinthebiosynthesisofcarotenoidbiosynthesishavebeenidentifiedandcharacterizedfromvariousfruits(Figure1)onlyafewtranscriptionfactorshavebeendemonstratedtodirectlyregulatetheexpressionofthesefunctiongenesinthepathwayThetranscriptionalcontrolofcarotenoidaccumulationhasbeenmostlystudiedintomatoduringripeningThesetranscriptionfactorsinclude RINR2R3GMYBNACSGR1PIF1RAP22EIN3etcHowevermostofthesetranscriptionfactorsexertbroadeffectsonfruitripeningieethylenesynthesisfruitsofteningcolorformationaromaandflavorproductionandareunlikelytobespecificregulatorsofcarotenoidbiosynthesis
RIPENINGGINHIBITOR (RIN)isa memberoftranscriptionfactorfamilycontaining MADSGboxwhichplaysanessentialroleinfruitripeningasaglobalmasterregulator[47]MarteletalreportedthatRINinteractswithSlPSY1thespecificPSYgeneassociatedwithcarotenoidbiosynthesisintomato[48]FujisawaetalidentifiedanumberofRINGtargetedgenesincarotenoidbiosynthesispathwaybychromatinimmunoprecipitationcoupled with DNA microarrayanalysisandfoundthatRIN regulatescarotenoidaccumulationviapositivelyregulatingPSY1ZISOandCRTISOinadirectmanneraswellaspositivelycontrollingZDSandnegativelyregulatingLYCBandLYCEbyanindirecteffectintomatofruit[49]
VGmybmyeloblastosisviraloncogenehomolog(MYB)proteinsbelongtoalargefamilyoftranscriptionfactorsinplantsThemajorityofMYBareR2R3GMYBsubfamilywithtworepeatsinitsMYBdomain
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TheR2R3GMYBTFsplaykeyrolesinregulatingplantGspecificprocessesincludingprimaryandsecondarymetabolismgrowthanddevelopmentandresponsetoabioticandbioticstresses [50]IncitrusCrMYB68an R2R3GMYBtranscriptionalfactorcandirectlybindandnegativelyregulateCrBCH2resultinginthedelayinthetransformationofαGandβGcaroteneandtheinhibitionofpeeldeGgreeningincitrus[51]SimilarlySagawaetalidentifiedanR2R3GMYBtranscriptionfactorReducedCarotenoidPigmentation1(RCP1)whichpositivelyregulatescarotenoidbiosynthesisduringMimuluslewisiiflowerdevelopmentLossGofGfunctionmutationsinRCP1resultindownGregulationofallcarotenoidbiosyntheticgenesandreducecarotenoidcontentwhileoverexpressionofthisgeneinthercp1 mutantbackgroundrestorescarotenoidproduction[52]Thereforeinadditiontoregulatinganthocyanins[53]R2R3GMYBisalsoinvolvedintheregulationofcarotenoidbiosynthesisinfruits
NAMATAF12andCUC2 (NAC)transcriptionfactorsareoneofthelargestfamiliesofplantGspecifictranscription factors which areimplicated in plant growth and developmentflavonoidbiosynthesiswoodformationandstressresponses [54]TheroleofNACtranscriptionfactorsinregulatingfruitripeningandsenescencehasbeenreportedintomato[55]banana[56]andlitchi[54]IntomatoSlNAC1and SlNAC4 positivelyregulatetomatofruitripeningbutexhibitdifferentialcharacteristicsAntisensesuppression ofSlNAC1 resultsin delayed ethylene production andfruitripeningbuthigherlevelsofethylenebiosynthesisandaccumulationoftotalcarotenoidandlycopeneaccompaniedbyupGregulatedexpressionofgenesrelatedtolycopeneandethylenebiosynthesis [55]DifferentfromSlNAC1reducedexpressionofSlNAC4byRNAinterference(RNAi)intomatodelayedfruitripeningdecreasedethylenesynthesisandreducedcarotenoidsbyalteringcarotenoidpathwayflux[57]AdditionallyFuetalreportedthatpapayaCpNAC2actsasatranscriptionalactivatorofCpPDS24CpZDSCpLCYGeandCpCHYGb by directly bindingtotheirpromotersand promotestheirtranscription[58]
SomeothertranscriptionfactorshavealsobeenreportedtobeinvolvedinthetranscriptionalregulationofstructuregenesinthecarotenoidbiosynthesispathwayIntomatoSlSGR1aSTAYGGREENproteinphysicallyinteracts with PSY1 to suppress PSY1 expressionthus negatively regulatinglycopeneproductionduringfruitripening[59]PhytochromeGinteractingfactor1downGregulatetheaccumulationofcarotenoidbybindingtothepromoterofPSYandrepressingPSYexpressioninArabidopsisseedlings[60]SimilarlyAtPAP22amemberoftheAPETALA2 (AP2)ethyleneGresponsiveelementGbindingproteintranscriptionfactorfamilydirectlybinds withthepromotersofPSY andPDS toregulatecarotenoidbiosynthesisinArabidopsis [61]PapayaCpEIN3aanethyleneresponsivefactordirectlybindswiththepromotersofCpPDS4andCpCHYGbandpromotestheirtranscription[58]InadditionoverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor(CrbHLH1)intomatolowerslycopeneaccumulationanddownGregulatecarotenoidbiosyntheticgeneexpressionintomatofruit[62]EctopicexpressionofanArabidopsisBZR1G1Dtranscriptionfactorinbrassinosteroidsignalingenhancescarotenoidaccumulationandfruitqualityattributesintomato[63]42 Epigeneticmodification
EpigeneticmodificationincludingthemethylationofDNACpGislandsandthemodificationofhistonesthatassociatedwithDNAinchromosomesplayaveryimportantroleinregulatinggeneexpressionEpigeneticmodification possiblyisimplicatedinregulation ofcarotenoid biosynthesis (Figure1)Cazzonellietalreportedahistonemethyltransferaseenzyme(SET DOMAIN GROUP8SDG8)thatmethylateshistoneH3onLys4andor36(H3K4andH3K36)inArabidopsisthalianawhichisrequiredforexpressionofCRTISOgeneMutationofSDG8resultsindownGregulatedexpressionofCRTISOgeneimpairedlutein biosynthesis andincreased shoot branchingThis wasthefirstreportregardinginvolvementofepigeneticmodificationinregulationofcarotenoidbiosynthesis[64]43 AlternativeRNAsplicing
AlternativeRNAsplicingisanimportantregulationofgeneexpressioninhighereukaryotesRecentlyAlvarezetalfoundthatalternativesplicingofPSYisimplicatedinregulationofcarotenogenesisinArabidopsisArabidopsispredominantlypossessasinglePSYgenewithtwoalternativesplicevariants
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(ASV)inlength andintheexonintronretention oftheir51049011UTRsASV1 with along 51049011UTR(untranslatedregion)isinvolvedindevelopmentallyregulatedcarotenoidformationwhileASV2withashort51049011UTRispreferentiallyinduced whenanimmediateincreaseinthecarotenoidpathwayfluxisrequired[65]44 microRNAs
MicroRNAs(miRNAs)arekeyregulatorsofgeneexpressionineukaryotesandplayapivotalroleintheregulationofvariousbiologicalaswellas metabolicprocessesInterestinglyanartificialmaturemicroRNAs (amiRNAs)successfullytargetedthe PSY mRNA andreduced PSY mRNA levelinPhaeodactylumtricornutumwhichfurtherreducedthelevelsofcarotenoidsinthePtricornutumamiRNAknockdownlines[66]ItwasspeculatedthatmiRNApossiblyisinvolvedinthetranscriptionregulationofcarotenoidbiosynthesisinplants
5 PostGtranscriptionalregulationofcarotenoidsbiosynthesis
InadditiontotranscriptionregulationofstructuregenesinvolvedinthecarotenoidpathwayrecentstudieshaverevealedotherregulatorymechanismstocontrolbiosyntheticenzymelevelsandactivitiesinplantssuchaspostGtranscriptionalregulation (Figure1)Theseregulatory mechanismspossiblyarepresentduringfruitdevelopmentandripening
ORANGE(OR)isaplastidGlocalizedproteincarryingacysteineGrichzincfingerdomainPreviousstudiedshowedthatORpromotescarotenoidaccumulationincalliofrice[67]andsweetpotato [68]FurtherZhouetalfoundthatArabidopsisORandPSYphysicallyinteractwitheachotherinplastidsresultingin minimaleffecton expression ofPSY gene [69]Howeveroverexpression of AtORsignificantlyincreasedtheamountofenzymaticallyactivePSYwhereasanatoratorGlikedoublemutantexhibitsadramaticallyreducedPSYlevelTheresultrevealedanovelmechanismunderlyingregulationofcarotenoidbiosynthesisviaposttranscriptionalmodificationofPSYinplants[69]
Inanotherimportantliterature on postGtranscriptionalregulation Welsch et alreported thatdegradationmodificationofproteinincarotenoidbiosynthesispathwayisimplicatedinregulationofcarotenoidbiosynthesisClpproteasesystemthemostabundantandcomplexsolubleproteasesystemintheplastidwasshowntotargetPSYTheabsenceofCLPC1CLPP4andCLPR1G2enhancedthelevelsofactivePSYandseveralothercarotenogenicenzymes[70]ThereforeORproteincounterbalancesClpGmediatedproteolysisinmaintainingPSYproteinhomeostasis
Theauthors1049011researchteamalsodiscoveredanindirectlypostGtranscriptionalregulatorymechanismtoregulateexpressionofPSYgeneinbananafruitSulfoxidationofproteinsbyreactiveoxygenspeciescancauseconformationalalterationorfunctionalimpairmentswhichcouldbereversedby Metsulfoxidereductase(Msr)ItwasfoundthatCaM1isasubstrateofMaMsrA7anditssulforxidationisrepairedbyMaMsrA7MaHY5G1actingasatranscriptionalrepressorofMaPSY1MaPSY2andMaPSY3inbananafruitisa CaMGbindingproteinSulfoxidationregulationof MaCaM1 by MaMsrA7altersexpressionofMaPSY1MaPSY2andMaPSY3genesbymodifyingMaHY5G1transcriptionalactivity(nopublisheddata)
TwootherproteinsalsohavebeenreportedtoberelatedtoposttranscriptionalregulationofcarotenoidbiosynthesisSlSGR1atomatoSTAYGGREENproteinregulateslycopeneaccumulationduringtomatofruitripeningviadirectinteractionwithPSY1[59]AnotherexampleisthepostGtranslationalregulationofDXSJGproteinJ20 (chaperoneproteindnaJ20)interactsdirectlywithDXSregulatingDXSproteinlevelandactivitybyidentifyingunfoldedormisfolded(damaged)formsofDXSandtargetingthemtotheHsp70systemforproperfoldingundernormalconditionsordegradationuponstress[71]
6 Hormonalregulationofcarotenoidbiosynthesis
Fruitripeningisacomplexandgeneticallyprogrammedprocesswhichinvolvesaseriesoforganolepticphysiologicaland biochemical changesresulting in the development of edible quality [72]
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PhytohormonesplaycrucialrolesinfruitripeningwhichhasbeenshowntoaffectcarotenoidaccumulationinfruitsMajorprogressregardingtheinvolvementofphytohormonesinregulatingcarotenoidbiosynthesishasbeenachievedinfruits
Ethyleneplaysa centralrolein climactericfruitripeningTherole ofethylenein carotenoidaccumulationinclimactericfruitshasbeenwidelystudiedIntomatoethyleneinitiatesfruitripeningresultinginarapidcolorshiftfromgreentoredwithincreasedlycopeneaccumulationanddecreasedβGxanthophyllsandchlorophyllscontentsTheroleofethyleneinregulatingcarotenoidbiosynthesisduringtomatofruitripeninginvolvesacomplexregulatorynetworkoftranscriptionfactorsRINasamasterregulatorbindstothepromotersofgenesinvolvedinfruitripeningprocessesincludingcarotenoidbiosynthesis[484973]APETALA2a(AP2a)isamemberofAP2ERFsuperfamilywhichregulatestomatofruitripeningbyregulatingethylenebiosynthesisandsignalingRepressionofAP2abyRNAinterference (RNAi)resultsin decreasedlevels ofphytoeneandlycopenebut higherβGcaroteneaccumulationconsistentwithdownGregulatedexpressionofPDSCtRGb2andCtrlSOandupGregulatedexpressionofZEP1MoreoverseveralripeningGrelatedregulatorsRIPENINGGINHIBITOR (RIN)NONGRIPENING (NOR)andCOLORLESSNONGRIPENING (CNR)functionupstreamofAP2aandpositivelyregulateitsexpression[74]SlERF6anothermemberofAP2ERFsuperfamilyisanegativeregulatorofcarotenoidaccumulationReducedexpressionofSlERF6byRNAienhancedbothcarotenoidandethylenelevelsduringfruitripening[75]InadditionthreeothertranscriptionfactorsarerelatedtotheethylenepathwayincludingTAGL1FRUITFULL1and2whichhavebeenreportedtopositivelyregulatecarotenoidaccumulationduringtomatoripening[76mdash78]
Auxinisinvolvedincellexpansionanddivisiontissuedifferentiationorgandevelopmentandarangeofphysiologicalprocess[79]Recentlyincreasingevidencesshowthatauxinalsoplaysanimportantroleinregulatingfruitripening[80]TheleveloffreeIAA (themostabundantauxin)tendstodeclinepriortotheonsetoftomatofruitripening[81]AuxinnegativelycontrolscarotenoidaccumulationintomatofruitExogenousIAA treatmentsignificantlyreduceslycopeneaccumulationbutenhancesthelevelsofneoxanthinandviolaxanthinaccompaniedbydownGregulatedexpressionofPsy1Psy3PdsZisoandCrtisoandupGregulatedexpressionofβGLcy1andCrtrGβ1 [82]Howeverwhetherauxindirectlyregulatesthegenesincarotenoidpathwayremainsunknown
Abscisicacid (ABA)isa key hormoneinvolvedintuningresponsestoabioticstressesLittleinformationisavailableabouttheinvolvementofABAinregulatingcarotenoidaccumulationduringtomatofruitripeningABA hasbeenreportedto beimplicatedinfruitripeningandinfluencecarotenoidaccumulationintomato[83]andstrawberry[84]fruit
JAssuchasmethyljasmonicacidjasmonicacidandotherderivativesareplantendogenoushormones[85]JAsalsoplayimportantrolesinfruitripeningLietalreportedthatJAinduceethyleneproductionbyMdMYC2GmediatedandMdERF3GmediatedupregulationofMdACS1gene[86]Applicationofmethyljasmonate(MeJA)increasestheaccumulationofanthocyaninβGcarotenecontentsandseveralphenoliccompounds[87]LiuetalfurtherilluminatedtheroleofJAinregulatingcarotenoidaccumulationduringtomatofruitripeningwithJAGdeficientmutants(spr2anddef1)anda35∷prosystransgenicline(35∷prosyswithincreasedJAlevelsandconstitutiveJAsignaling)andfoundthatlycopeneaccumulationissignificantlyinhibitedinspr2anddef1fruitbutenhancedin35S∷prosysfruitaccompaniedbyasimilartrendofexpressionoflycopenebiosyntheticgenes[88]Inadditionethyleneproductionisdepressedinspr2anddef1fruitbutincreasedin35S∷prosysfruitMoreovertheexogenousapplicationofMeJAtoNeverripe (Nr)an ethyleneGinsensitive mutantresultsin enhancedlycopene accumulation andexpressionoflycopenebiosyntheticgenes [88]TheseresultsindicatedthatJA promoteslycopenebiosynthesisinamannerindependentofethylene
7 Futureresearchdirections
CarotenoidmetabolismandregulationhavebeenwidelyresearchedinplantsHoweverthecarotenoidG
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relatedstudieshavebeenmostlyfocusedonmodelspeciessuchasArabidopsisandtomatoThemolecularmechanismsunderlyingcarotenoid metabolism andregulationin otherfruitspeciesarestillpoorlyunderstoodConsideringthediversityofcarotenoidsinfruitsitisnecessarytoinvestigatethenovelgenesandregulationmechanismsrelatedtocarotenoidbiosynthesisinplants
Carotenoid accumulation is cooperatively controlled at multiple levelsincluding developmentalprogramsenvironmentalfactorsand metabolicsignalsTranscriptionfactorsplayimportantroleinregulatingcarotenoidbiosynthesisHoweveronlyafewtranscriptionfactorsinvolvedincarotenoidbiosynthesisareidentifiedandtranscriptionregulationismainlyrelatedtoexpressionofPSYMoreovermostofthesetranscriptionfactorsexerttheirinfluencesviaregulatingfruitripeningnotspecificcarotenoidbiosynthesisGrelated genesTheinteracting partners oftranscriptionfactorsinvolvedincarotenoidmetabolicnetworkalsoremaintobeidentifiedPostGtranscriptionalregulationalternativeRNAsplicingepigeneticmodificationandmiRNAareofimportanceinplantgrowthanddevelopmentandresponsetoabioticstressHoweverlittleinformationregardingtheinvolvementofthesemechanismsinregulating carotenoid metabolism in planteven in Arabidopsisis available Application ofphytohormonescontributestoregulatecarotenoidcontentand maintainfruitqualityinagricultureandpostharvesttreatmentThemechanismunderlyingregulationofcarotenoidmetabolismbyphytohormonesespeciallycrossGtalkamongdifferentphytohormonesarestillfarfrombeingunderstoodInthefuturestudiesbetterunderstandingofcarotenoid metabolismandregulationinfruitswillnotonlyhaveanimportantimpactongeneticimprovementandpostharvesttreatmentbutalsowillstrengthenknowledgeofcarotenoidregulationinplants
Acknowledgements
ThisworkwassupportedbytheNationalNaturalScienceFoundationofChina(GrantNos3177204131322044and31501545)ScienceandTechnologyPlanningProjectofGuangdongProvince(GrantNo2015B090901058)ScienceandTechnologyPlanningProjectofGuangzhou (GrantNo201604020048)andTalentProgramofGuangdongProvince(No2014TX01N049)
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201619388mdash96[56]ShanWKuangJFChenLetalMolecularcharacterizationofbananaNACtranscriptionfactorsandtheirinteractionswithethylene
signallingcomponentEILduringfruitripeningJournalofExperimentalBotany2012635171mdash5187[57]ZhuMChenGZhouSetalAnewtomatoNAC (NAMATAF12CUC2)transcriptionfactorSlNAC4functionsasapositive
regulatoroffruitripeningandcarotenoidaccumulationPlantandCellPhysiology201455119mdash135[58]FuCCHanYCKuangJFetalPapayaCpEIN3aandCpNAC2cooperativelyregulatecarotenoidbiosynthesisrelatedgenesCpPDS2
4CpLCYGeandCpCHYGbduringfruitripeningPlantandCellPhysiology2017582155mdash2165[59]LuoZZhangJLiJetalASTAYGGREENproteinSlSGR1regulateslycopeneandbetaGcaroteneaccumulationbyinteractingdirectly
withSlPSY1duringripeningprocessesintomatoNewPhytologist2013198442mdash452[60]ToledoGOrtizGHuqERodriguezGConcepcionMDirectregulationofphytoenesynthasegeneexpressionandcarotenoidbiosynthesisby
phytochromeGinteractingfactorsProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica201010711626mdash
11631[61]WelschRMaassDVoegelTetalTranscriptionfactorRAP22anditsinteractingpartnerSINAT2Stableelementsinthe
carotenogenesisofArabidopsisleavesPlantPhysiology20071451073mdash1085[62]EndoTFujiiHSugiyamaAetalOverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor (CubHLH1)whichis
homologoustoArabidopsisactivationGtaggedbri1suppressor1interactingfactorgenesmodulatescarotenoidmetabolismintransgenictomatoPlantScience201624335mdash48
[63]LiuLJiaCZhang MetalEctopicexpressionofaBZR1G1DtranscriptionfactorinbrassinosteroidsignallingenhancescarotenoidaccumulationandfruitqualityattributesintomatoPlantBiotechnologyJournal201412105mdash115
[64]CazzonelliCICuttrissAJCossettoSBetalRegulationofcarotenoidcompositionandshootbranchinginarabidopsisbyachromatinmodifyinghistonemethyltransferaseSDG8PlantCell20092139mdash53
[65]AlvarezDVossBMaassDetalCarotenogenesisisregulatedby51049011UTRGmediatedtranslationofphytoenesynthasesplicevariantsPlantPhysiology20161722314mdash2326
[66]KaurSSpillaneCReductionincarotenoidlevelsinthemarinediatomPhaeodactylumtricornutum byartificialmicroRNAstargetedagainsttheendogenousphytoenesynthasegeneMarineBiotechnology2015171mdash7
[67]BaiCRiveraSMMedinaVetalAninvitrosystemfortherapidfunctionalcharacterizationofgenesinvolvedincarotenoidbiosynthesisandaccumulationPlantJournal201477464mdash475
[68]KimSHAhnYOAhnMJetalCloningandcharacterizationofanOrangegenethatincreasescarotenoidaccumulationandsaltstresstoleranceintransgenicsweetpotatoculturesPlantPhysiologyandBiochemistry201370445mdash454
[69]ZhouXWelschRYang YetalArabidopsisORproteinsarethemajorposttranscriptionalregulatorsofphytoenesynthaseincontrollingcarotenoidbiosynthesisProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica20151123558mdash
3563[70]WelschRZhouXYuanHetalClpproteaseandORdirectlycontroltheproteostasisofphytoenesynthasethecrucialenzymefor
carotenoidbiosynthesisinArabidopsisMolecularPlant201811149mdash162
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[71]PulidoPToledoGOrtizGPhillipsMAetalArabidopsisJGProteinJ20deliversthefirstenzymeoftheplastidialisoprenoidpathwaytoproteinqualitycontrolPlantCell2013254183mdash4194
[72]PrasannaVPrabhaTNTharanathanRNFruitripeningphenomenamdashAnoverviewCriticalReviewsinFoodScienceandNutrition
2007471mdash19[73]FujisawaMShimaYHiguchiNetalDirecttargetsofthetomatoGripeningregulatorRINidentifiedbytranscriptomeandchromatin
immunoprecipitationanalysesPlanta20122351107mdash1122[74]KarlovaRRosinFMBusscherGLangeJetalTranscriptomeandmetaboliteprofilingshowthatAPETALA2aisamajorregulatorof
tomatofruitripeningPlantCell201123923mdash941[75]LeeJMJoungJGMcQuinnRetalCombinedtranscriptomegeneticdiversityandmetaboliteprofilingintomatofruitrevealsthatthe
ethyleneresponsefactorSlERF6playsanimportantroleinripeningandcarotenoidaccumulationPlantJournal201270191mdash204[76]ShimaYFujisawaMKitagawaMetalTomatoFRUITFULLhomologsregulatefruitripeningviaethylenebiosynthesisBioscience
BiotechnologyandBiochemistry201478231mdash237[77]VrebalovJPanILArroyoAJMetalFleshyfruitexpansionandripeningareregulatedbythetomatoSHATTERPROOFgene
TAGL1PlantCell2009213041mdash3062[78]WangSLuGHouZetalMembersofthetomatoFRUITFULL MADSGboxfamilyregulatestyleabscissionandfruitripening
JournalofExperimentalBotany2014653005mdash3014[79]HagenGAuxinsignaltransductionEssaysinBiochemistry2015581mdash12[80]PanLZengWNiuLetalPpYUC11astrongcandidategeneforthestonyhardphenotypeinpeach(PrunuspersicaLBatsch)
participatesinIAAbiosynthesisduringfruitripeningJournalofExperimentalBotany2015667031mdash7044[81]BoettcherCKeyzersRABossPKetalSequestrationofauxinbytheindoleG3GaceticacidGamidosynthetaseGH3G1ingrapeberry(Vitis
viniferaL)andtheproposedroleofauxinconjugationduringripeningJournalofExperimentalBotany2010613615mdash3625[82]SuLDirettoGPurgattoEetalCarotenoidaccumulationduringtomatofruitripeningismodulatedbytheauxinGethylenebalance
BMCPlantBiology201515[83]WengLZhaoFLiRetalThezincfingertranscriptionfactorSlZFP2negativelyregulatesabscisicacidbiosynthesisandfruitripening
intomatoPlantPhysiology2015167931mdash949[84]JiaHFChaiYMLiCLetalAbscisicacidplaysanimportantroleintheregulationofstrawberryfruitripeningPlantPhysiology
2011157188mdash199[85]CreelmanRAMulletJEBiosynthesisandactionofjasmonatesinplantsAnnualReviewofPlantPhysiologyandPlantMolecular
Biology199748355mdash381[86]LiTXuYZhangLetalThejasmonateGactivatedtranscriptionfactorMdMYC2regulatesETHYLENERESPONSEFACTORand
ethylenebiosyntheticgenestopromoteethylenebiosynthesisduringapplefruitripeningPlantCell2017291316mdash1334[87]RudellDRMattheisJPFanXetalMethyljasmonateenhancesanthocyaninaccumulationandmodifiesproductionofphenolicsand
pigmentsinlsquoFujirsquoapplesJournaloftheAmericanSocietyforHorticulturalScience2002127435mdash441[88]LiuLWeiJZhang MetalEthyleneindependentinductionoflycopenebiosynthesisintomatofruitsbyjasmonatesJournalof
ExperimentalBotany2012635751mdash5761
DuanXuewu
ProfDuanXuewureceivedhisPhDdegreefromtheGraduateSchoolof
ChineseAcademyofSciencesin2004Heiscurrentlyaprofessorof
South China Botanical GardenChinese Academy ofSciencesHis
researchinterestsincludebiochemistryandmolecularbiologyinrelation
to ripeningsenescence and deterioration of postharvestfruits and
vegetablesespeciallytranscriptionalregulationandposttranscriptional
modificationanddevelopmentofstorageandhandlingtechniquesin
subtropicalandtropicalfruitHewasthePrincipalInvestigatorofmore
than20projectsfromthegovernmentUptonowhehaspublishedmorethan90papersandhasbeen
patented29inventionpatentsincludinganUSApatent
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geranylgeranyldiphosphate(GGPP)synthase(GGPPS)[39]ThecondensationoftwoGGPPmoleculescatalyzedbyphytoenesynthase(PSY)formsuncolored15Gcis
phytoenethefirstcarotenoidproductThisstepisregardedasthemostimportantregulatorystepincarotenoidbiosynthesis[39]TomatocontainsthreePSYgenesPSY1PSY2andPSY3whichexhibittissueGspecificexpressionmainlyinfruitinpetalandinrootrespectivelyDuringtomatoripeningtheaccumulationofcarotenoidcorrelateswiththeexpressionofPSY1 [4041]TransgenictomatobyantisenseinhibitionofPSY1producesonly3ofthecarotenoidinwildtypewildtypefruit[42]SimilarresultsregardingtherelationshipbetweenupregulatedexpressionofPSYgenesandincreasedcarotenoidaccumulationhavebeenreportedinalargenumberoffruitssuchascitrus[43]pepper[34]persimmon[44]loquat[12]watermelon [25]andbanana[45]Uncoloredphytoenethenundergoesaseriesofdesaturationandisomerizationreactionsto generateredGcolored allGtransGlycopenethe predominatepigmentinredtomatoand watermelonfruitsThesereactionsaresequentiallycatalyzedbyphytoenedesaturase(PDS)ζGcarotenedesaturase(ZDS)ζGcaroteneisomerase(ZGISO)andcarotenoidisomerase(CRTISO)[39]
Downstreaminthecarotenoidbiosynthesispathwaythecyclizationoflycopeneislocatedatthebranchingpointofthepathwaywhichproduceaseriesofcarotene(Figure1)[6739]ThecyclizationoflycopeneinvolvestwoenzymeslycopeneβGcyclase(LCYB)andlycopeneεGcyclase(LCYE)LCYBcatalyzesatwoGstepreactiontoproduceβGcarotenewithtwoβGringsAεGringandaβGringaresequentiallyaddedtolycopeneformingαGcarotene(βεGcarotene)whichiscatalyzedbyLCYEandLCYBFollowingthecyclizationoflycopeneαGcaroteneandβGcarotenearesubjectedtohydroxylationandepoxidationformingaseriesofxanthophylls[6739]TheαGcaroteneissequentiallycatalyzedbytwohydroxylasesCYP97A and CYP97CgeneratingluteinthefinalproductofαGbranchincarotenoid biosynthesispathwayβGcaroteneundergoestwostepsofhydroxylationandtwostepsofepoxidationcatalyzedbyβGcarotenehydroxylase (BCH)andzeaxanthinepoxidase (ZEP)sequentiallyformingβGcryptoxanthinzeaxanthinantheraxanthinandviolaxanthin[6739]Theconversionofviolaxanthinintoneoxanthinbyneoxanthinsynthase(NXS)completesthecorebiosynthesispathway[46]
4 Transcriptionalregulationofcarotenoidbiosynthesis
41 TranscriptionfactorTranscriptionalregulationplaysavitalroleinfruitdevelopmentandripeningaswellasabioticstresses
ItiswellknownthattranscriptionfactorsareinvolvedintranscriptionregulationofstructureandfunctiongenesincarotenoidbiosynthesispathwayAlthoughthegenesinvolvedinthebiosynthesisofcarotenoidbiosynthesishavebeenidentifiedandcharacterizedfromvariousfruits(Figure1)onlyafewtranscriptionfactorshavebeendemonstratedtodirectlyregulatetheexpressionofthesefunctiongenesinthepathwayThetranscriptionalcontrolofcarotenoidaccumulationhasbeenmostlystudiedintomatoduringripeningThesetranscriptionfactorsinclude RINR2R3GMYBNACSGR1PIF1RAP22EIN3etcHowevermostofthesetranscriptionfactorsexertbroadeffectsonfruitripeningieethylenesynthesisfruitsofteningcolorformationaromaandflavorproductionandareunlikelytobespecificregulatorsofcarotenoidbiosynthesis
RIPENINGGINHIBITOR (RIN)isa memberoftranscriptionfactorfamilycontaining MADSGboxwhichplaysanessentialroleinfruitripeningasaglobalmasterregulator[47]MarteletalreportedthatRINinteractswithSlPSY1thespecificPSYgeneassociatedwithcarotenoidbiosynthesisintomato[48]FujisawaetalidentifiedanumberofRINGtargetedgenesincarotenoidbiosynthesispathwaybychromatinimmunoprecipitationcoupled with DNA microarrayanalysisandfoundthatRIN regulatescarotenoidaccumulationviapositivelyregulatingPSY1ZISOandCRTISOinadirectmanneraswellaspositivelycontrollingZDSandnegativelyregulatingLYCBandLYCEbyanindirecteffectintomatofruit[49]
VGmybmyeloblastosisviraloncogenehomolog(MYB)proteinsbelongtoalargefamilyoftranscriptionfactorsinplantsThemajorityofMYBareR2R3GMYBsubfamilywithtworepeatsinitsMYBdomain
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60 Vol26No12018 SCIENCEFOUNDATIONINCHINA
TheR2R3GMYBTFsplaykeyrolesinregulatingplantGspecificprocessesincludingprimaryandsecondarymetabolismgrowthanddevelopmentandresponsetoabioticandbioticstresses [50]IncitrusCrMYB68an R2R3GMYBtranscriptionalfactorcandirectlybindandnegativelyregulateCrBCH2resultinginthedelayinthetransformationofαGandβGcaroteneandtheinhibitionofpeeldeGgreeningincitrus[51]SimilarlySagawaetalidentifiedanR2R3GMYBtranscriptionfactorReducedCarotenoidPigmentation1(RCP1)whichpositivelyregulatescarotenoidbiosynthesisduringMimuluslewisiiflowerdevelopmentLossGofGfunctionmutationsinRCP1resultindownGregulationofallcarotenoidbiosyntheticgenesandreducecarotenoidcontentwhileoverexpressionofthisgeneinthercp1 mutantbackgroundrestorescarotenoidproduction[52]Thereforeinadditiontoregulatinganthocyanins[53]R2R3GMYBisalsoinvolvedintheregulationofcarotenoidbiosynthesisinfruits
NAMATAF12andCUC2 (NAC)transcriptionfactorsareoneofthelargestfamiliesofplantGspecifictranscription factors which areimplicated in plant growth and developmentflavonoidbiosynthesiswoodformationandstressresponses [54]TheroleofNACtranscriptionfactorsinregulatingfruitripeningandsenescencehasbeenreportedintomato[55]banana[56]andlitchi[54]IntomatoSlNAC1and SlNAC4 positivelyregulatetomatofruitripeningbutexhibitdifferentialcharacteristicsAntisensesuppression ofSlNAC1 resultsin delayed ethylene production andfruitripeningbuthigherlevelsofethylenebiosynthesisandaccumulationoftotalcarotenoidandlycopeneaccompaniedbyupGregulatedexpressionofgenesrelatedtolycopeneandethylenebiosynthesis [55]DifferentfromSlNAC1reducedexpressionofSlNAC4byRNAinterference(RNAi)intomatodelayedfruitripeningdecreasedethylenesynthesisandreducedcarotenoidsbyalteringcarotenoidpathwayflux[57]AdditionallyFuetalreportedthatpapayaCpNAC2actsasatranscriptionalactivatorofCpPDS24CpZDSCpLCYGeandCpCHYGb by directly bindingtotheirpromotersand promotestheirtranscription[58]
SomeothertranscriptionfactorshavealsobeenreportedtobeinvolvedinthetranscriptionalregulationofstructuregenesinthecarotenoidbiosynthesispathwayIntomatoSlSGR1aSTAYGGREENproteinphysicallyinteracts with PSY1 to suppress PSY1 expressionthus negatively regulatinglycopeneproductionduringfruitripening[59]PhytochromeGinteractingfactor1downGregulatetheaccumulationofcarotenoidbybindingtothepromoterofPSYandrepressingPSYexpressioninArabidopsisseedlings[60]SimilarlyAtPAP22amemberoftheAPETALA2 (AP2)ethyleneGresponsiveelementGbindingproteintranscriptionfactorfamilydirectlybinds withthepromotersofPSY andPDS toregulatecarotenoidbiosynthesisinArabidopsis [61]PapayaCpEIN3aanethyleneresponsivefactordirectlybindswiththepromotersofCpPDS4andCpCHYGbandpromotestheirtranscription[58]InadditionoverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor(CrbHLH1)intomatolowerslycopeneaccumulationanddownGregulatecarotenoidbiosyntheticgeneexpressionintomatofruit[62]EctopicexpressionofanArabidopsisBZR1G1Dtranscriptionfactorinbrassinosteroidsignalingenhancescarotenoidaccumulationandfruitqualityattributesintomato[63]42 Epigeneticmodification
EpigeneticmodificationincludingthemethylationofDNACpGislandsandthemodificationofhistonesthatassociatedwithDNAinchromosomesplayaveryimportantroleinregulatinggeneexpressionEpigeneticmodification possiblyisimplicatedinregulation ofcarotenoid biosynthesis (Figure1)Cazzonellietalreportedahistonemethyltransferaseenzyme(SET DOMAIN GROUP8SDG8)thatmethylateshistoneH3onLys4andor36(H3K4andH3K36)inArabidopsisthalianawhichisrequiredforexpressionofCRTISOgeneMutationofSDG8resultsindownGregulatedexpressionofCRTISOgeneimpairedlutein biosynthesis andincreased shoot branchingThis wasthefirstreportregardinginvolvementofepigeneticmodificationinregulationofcarotenoidbiosynthesis[64]43 AlternativeRNAsplicing
AlternativeRNAsplicingisanimportantregulationofgeneexpressioninhighereukaryotesRecentlyAlvarezetalfoundthatalternativesplicingofPSYisimplicatedinregulationofcarotenogenesisinArabidopsisArabidopsispredominantlypossessasinglePSYgenewithtwoalternativesplicevariants
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(ASV)inlength andintheexonintronretention oftheir51049011UTRsASV1 with along 51049011UTR(untranslatedregion)isinvolvedindevelopmentallyregulatedcarotenoidformationwhileASV2withashort51049011UTRispreferentiallyinduced whenanimmediateincreaseinthecarotenoidpathwayfluxisrequired[65]44 microRNAs
MicroRNAs(miRNAs)arekeyregulatorsofgeneexpressionineukaryotesandplayapivotalroleintheregulationofvariousbiologicalaswellas metabolicprocessesInterestinglyanartificialmaturemicroRNAs (amiRNAs)successfullytargetedthe PSY mRNA andreduced PSY mRNA levelinPhaeodactylumtricornutumwhichfurtherreducedthelevelsofcarotenoidsinthePtricornutumamiRNAknockdownlines[66]ItwasspeculatedthatmiRNApossiblyisinvolvedinthetranscriptionregulationofcarotenoidbiosynthesisinplants
5 PostGtranscriptionalregulationofcarotenoidsbiosynthesis
InadditiontotranscriptionregulationofstructuregenesinvolvedinthecarotenoidpathwayrecentstudieshaverevealedotherregulatorymechanismstocontrolbiosyntheticenzymelevelsandactivitiesinplantssuchaspostGtranscriptionalregulation (Figure1)Theseregulatory mechanismspossiblyarepresentduringfruitdevelopmentandripening
ORANGE(OR)isaplastidGlocalizedproteincarryingacysteineGrichzincfingerdomainPreviousstudiedshowedthatORpromotescarotenoidaccumulationincalliofrice[67]andsweetpotato [68]FurtherZhouetalfoundthatArabidopsisORandPSYphysicallyinteractwitheachotherinplastidsresultingin minimaleffecton expression ofPSY gene [69]Howeveroverexpression of AtORsignificantlyincreasedtheamountofenzymaticallyactivePSYwhereasanatoratorGlikedoublemutantexhibitsadramaticallyreducedPSYlevelTheresultrevealedanovelmechanismunderlyingregulationofcarotenoidbiosynthesisviaposttranscriptionalmodificationofPSYinplants[69]
Inanotherimportantliterature on postGtranscriptionalregulation Welsch et alreported thatdegradationmodificationofproteinincarotenoidbiosynthesispathwayisimplicatedinregulationofcarotenoidbiosynthesisClpproteasesystemthemostabundantandcomplexsolubleproteasesystemintheplastidwasshowntotargetPSYTheabsenceofCLPC1CLPP4andCLPR1G2enhancedthelevelsofactivePSYandseveralothercarotenogenicenzymes[70]ThereforeORproteincounterbalancesClpGmediatedproteolysisinmaintainingPSYproteinhomeostasis
Theauthors1049011researchteamalsodiscoveredanindirectlypostGtranscriptionalregulatorymechanismtoregulateexpressionofPSYgeneinbananafruitSulfoxidationofproteinsbyreactiveoxygenspeciescancauseconformationalalterationorfunctionalimpairmentswhichcouldbereversedby Metsulfoxidereductase(Msr)ItwasfoundthatCaM1isasubstrateofMaMsrA7anditssulforxidationisrepairedbyMaMsrA7MaHY5G1actingasatranscriptionalrepressorofMaPSY1MaPSY2andMaPSY3inbananafruitisa CaMGbindingproteinSulfoxidationregulationof MaCaM1 by MaMsrA7altersexpressionofMaPSY1MaPSY2andMaPSY3genesbymodifyingMaHY5G1transcriptionalactivity(nopublisheddata)
TwootherproteinsalsohavebeenreportedtoberelatedtoposttranscriptionalregulationofcarotenoidbiosynthesisSlSGR1atomatoSTAYGGREENproteinregulateslycopeneaccumulationduringtomatofruitripeningviadirectinteractionwithPSY1[59]AnotherexampleisthepostGtranslationalregulationofDXSJGproteinJ20 (chaperoneproteindnaJ20)interactsdirectlywithDXSregulatingDXSproteinlevelandactivitybyidentifyingunfoldedormisfolded(damaged)formsofDXSandtargetingthemtotheHsp70systemforproperfoldingundernormalconditionsordegradationuponstress[71]
6 Hormonalregulationofcarotenoidbiosynthesis
Fruitripeningisacomplexandgeneticallyprogrammedprocesswhichinvolvesaseriesoforganolepticphysiologicaland biochemical changesresulting in the development of edible quality [72]
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PhytohormonesplaycrucialrolesinfruitripeningwhichhasbeenshowntoaffectcarotenoidaccumulationinfruitsMajorprogressregardingtheinvolvementofphytohormonesinregulatingcarotenoidbiosynthesishasbeenachievedinfruits
Ethyleneplaysa centralrolein climactericfruitripeningTherole ofethylenein carotenoidaccumulationinclimactericfruitshasbeenwidelystudiedIntomatoethyleneinitiatesfruitripeningresultinginarapidcolorshiftfromgreentoredwithincreasedlycopeneaccumulationanddecreasedβGxanthophyllsandchlorophyllscontentsTheroleofethyleneinregulatingcarotenoidbiosynthesisduringtomatofruitripeninginvolvesacomplexregulatorynetworkoftranscriptionfactorsRINasamasterregulatorbindstothepromotersofgenesinvolvedinfruitripeningprocessesincludingcarotenoidbiosynthesis[484973]APETALA2a(AP2a)isamemberofAP2ERFsuperfamilywhichregulatestomatofruitripeningbyregulatingethylenebiosynthesisandsignalingRepressionofAP2abyRNAinterference (RNAi)resultsin decreasedlevels ofphytoeneandlycopenebut higherβGcaroteneaccumulationconsistentwithdownGregulatedexpressionofPDSCtRGb2andCtrlSOandupGregulatedexpressionofZEP1MoreoverseveralripeningGrelatedregulatorsRIPENINGGINHIBITOR (RIN)NONGRIPENING (NOR)andCOLORLESSNONGRIPENING (CNR)functionupstreamofAP2aandpositivelyregulateitsexpression[74]SlERF6anothermemberofAP2ERFsuperfamilyisanegativeregulatorofcarotenoidaccumulationReducedexpressionofSlERF6byRNAienhancedbothcarotenoidandethylenelevelsduringfruitripening[75]InadditionthreeothertranscriptionfactorsarerelatedtotheethylenepathwayincludingTAGL1FRUITFULL1and2whichhavebeenreportedtopositivelyregulatecarotenoidaccumulationduringtomatoripening[76mdash78]
Auxinisinvolvedincellexpansionanddivisiontissuedifferentiationorgandevelopmentandarangeofphysiologicalprocess[79]Recentlyincreasingevidencesshowthatauxinalsoplaysanimportantroleinregulatingfruitripening[80]TheleveloffreeIAA (themostabundantauxin)tendstodeclinepriortotheonsetoftomatofruitripening[81]AuxinnegativelycontrolscarotenoidaccumulationintomatofruitExogenousIAA treatmentsignificantlyreduceslycopeneaccumulationbutenhancesthelevelsofneoxanthinandviolaxanthinaccompaniedbydownGregulatedexpressionofPsy1Psy3PdsZisoandCrtisoandupGregulatedexpressionofβGLcy1andCrtrGβ1 [82]Howeverwhetherauxindirectlyregulatesthegenesincarotenoidpathwayremainsunknown
Abscisicacid (ABA)isa key hormoneinvolvedintuningresponsestoabioticstressesLittleinformationisavailableabouttheinvolvementofABAinregulatingcarotenoidaccumulationduringtomatofruitripeningABA hasbeenreportedto beimplicatedinfruitripeningandinfluencecarotenoidaccumulationintomato[83]andstrawberry[84]fruit
JAssuchasmethyljasmonicacidjasmonicacidandotherderivativesareplantendogenoushormones[85]JAsalsoplayimportantrolesinfruitripeningLietalreportedthatJAinduceethyleneproductionbyMdMYC2GmediatedandMdERF3GmediatedupregulationofMdACS1gene[86]Applicationofmethyljasmonate(MeJA)increasestheaccumulationofanthocyaninβGcarotenecontentsandseveralphenoliccompounds[87]LiuetalfurtherilluminatedtheroleofJAinregulatingcarotenoidaccumulationduringtomatofruitripeningwithJAGdeficientmutants(spr2anddef1)anda35∷prosystransgenicline(35∷prosyswithincreasedJAlevelsandconstitutiveJAsignaling)andfoundthatlycopeneaccumulationissignificantlyinhibitedinspr2anddef1fruitbutenhancedin35S∷prosysfruitaccompaniedbyasimilartrendofexpressionoflycopenebiosyntheticgenes[88]Inadditionethyleneproductionisdepressedinspr2anddef1fruitbutincreasedin35S∷prosysfruitMoreovertheexogenousapplicationofMeJAtoNeverripe (Nr)an ethyleneGinsensitive mutantresultsin enhancedlycopene accumulation andexpressionoflycopenebiosyntheticgenes [88]TheseresultsindicatedthatJA promoteslycopenebiosynthesisinamannerindependentofethylene
7 Futureresearchdirections
CarotenoidmetabolismandregulationhavebeenwidelyresearchedinplantsHoweverthecarotenoidG
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relatedstudieshavebeenmostlyfocusedonmodelspeciessuchasArabidopsisandtomatoThemolecularmechanismsunderlyingcarotenoid metabolism andregulationin otherfruitspeciesarestillpoorlyunderstoodConsideringthediversityofcarotenoidsinfruitsitisnecessarytoinvestigatethenovelgenesandregulationmechanismsrelatedtocarotenoidbiosynthesisinplants
Carotenoid accumulation is cooperatively controlled at multiple levelsincluding developmentalprogramsenvironmentalfactorsand metabolicsignalsTranscriptionfactorsplayimportantroleinregulatingcarotenoidbiosynthesisHoweveronlyafewtranscriptionfactorsinvolvedincarotenoidbiosynthesisareidentifiedandtranscriptionregulationismainlyrelatedtoexpressionofPSYMoreovermostofthesetranscriptionfactorsexerttheirinfluencesviaregulatingfruitripeningnotspecificcarotenoidbiosynthesisGrelated genesTheinteracting partners oftranscriptionfactorsinvolvedincarotenoidmetabolicnetworkalsoremaintobeidentifiedPostGtranscriptionalregulationalternativeRNAsplicingepigeneticmodificationandmiRNAareofimportanceinplantgrowthanddevelopmentandresponsetoabioticstressHoweverlittleinformationregardingtheinvolvementofthesemechanismsinregulating carotenoid metabolism in planteven in Arabidopsisis available Application ofphytohormonescontributestoregulatecarotenoidcontentand maintainfruitqualityinagricultureandpostharvesttreatmentThemechanismunderlyingregulationofcarotenoidmetabolismbyphytohormonesespeciallycrossGtalkamongdifferentphytohormonesarestillfarfrombeingunderstoodInthefuturestudiesbetterunderstandingofcarotenoid metabolismandregulationinfruitswillnotonlyhaveanimportantimpactongeneticimprovementandpostharvesttreatmentbutalsowillstrengthenknowledgeofcarotenoidregulationinplants
Acknowledgements
ThisworkwassupportedbytheNationalNaturalScienceFoundationofChina(GrantNos3177204131322044and31501545)ScienceandTechnologyPlanningProjectofGuangdongProvince(GrantNo2015B090901058)ScienceandTechnologyPlanningProjectofGuangzhou (GrantNo201604020048)andTalentProgramofGuangdongProvince(No2014TX01N049)
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64 Vol26No12018 SCIENCEFOUNDATIONINCHINA
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ChemicalToxicology2010483406mdash3411[22]TuanPAKimJKParkNIetalCarotenoidcontentandexpressionofphytoenesynthaseandphytoenedesaturasegenesinbittermelon
(Momordicacharantia)FoodChemistry20111261686mdash1692[23]SchweiggertRMSteingassCBHellerAetalCharacterizationofchromoplastsandcarotenoidsofredGandyellowGfleshedpapaya
(CaricapapayaL)Planta20112341031mdash1044[24]AbushitaAADaoodHGBiacsPAChangeincarotenoidsandantioxidantvitaminsintomatoasafunctionofvarietalandtechnological
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(Cucurbitaceae)withdifferentfleshcolorsFoodScienceandBiotechnology201221531mdash541[27]AlquezarBRodrigoMJLadoJetalAcomparativephysiologicalandtranscriptionalstudyofcarotenoidbiosynthesisinwhiteandred
grapefruit(CitrusparadisiMacf)TreeGeneticsamp Genomes201391257mdash1269[28]KatoMMechanismofcarotenoidaccumulationincitrusfruitJournaloftheJapaneseSocietyforHorticulturalScience201281219mdash
233[29]IsaacsonTRonenGZamirDetalCloningoftangerinefromtomatorevealsacarotenoidisomeraseessentialfortheproductionofbetaG
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basedcloningofBetaandoldGgoldcolormutationsintomatoProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica20009711102mdash11107
[32]HorneroGMendezDdeGuevaraRGLMinguezGMosqueraMICarotenoidbiosynthesischangesinfiveredpepper(CapsicumannuumL)
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49mdash59[34]RodriguezGUribeLGuzmanIRajapakseWetalCarotenoidaccumulationinorangeGpigmentedCapsicumannuumfruitregulatedat
multiplelevelsJournalofExperimentalBotany201263517mdash526[35]SunTYuanHCaoHetalCarotenoidmetabolisminplantstheroleofplastidsMolecularPlant20181158mdash74[36]BramleyPMRegulationofcarotenoidformationduringtomatofruitripeninganddevelopmentJournalofExperimentalBotany2002
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199[39]CazzonelliCIPogsonBJSourcetosinkregulationofcarotenoidbiosynthesisinplantsTrendsinPlantScience201015266mdash274[40]FraserPDEnfissiEMAHalketJMetalManipulationofphytoenelevelsintomatofruiteffectsonisoprenoidsplastidsand
intermediarymetabolismPlantCell2007193194mdash3211[41]FraserPDRomerSKianoJWetalElevationofcarotenoidsintomatobygeneticmanipulationJournaloftheScienceofFoodand
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[43]PengGWangCSongSetalTheroleof1GdeoxyGDGxyluloseG5GphosphatesynthaseandphytoenesynthasegenefamilyincitruscarotenoidaccumulationPlantPhysiologyandBiochemistry20137167mdash76
[44]ZhaoDZhouCTaoJCarotenoidaccumulationandcarotenogenicgenesexpressionduringtwotypesofpersimmonfruit(DiospyroskakiL)developmentPlantMolecularBiologyReporter201129646mdash654
[45]MlalaziBWelschRNamanyaPetalIsolationandfunctionalcharacterisationofbananaphytoenesynthasegenesaspotentialcisgenesPlanta20122361585mdash1598
[46]NeumanHGalpazNCunningham FXetalThetomatomutationnxd1revealsagenenecessaryforneoxanthinbiosynthesisanddemonstratesthatviolaxanthinisasufficientprecursorforabscisicacidbiosynthesisPlantJournal20147880mdash93
[47]VrebalovJRuezinskyDPadmanabhanVetalA MADSGboxgenenecessaryforfruitripeningatthetomatoripeningGinhibitor(Rin)
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1568mdash1579[49]Fujisawa MNakanoTShimaYetalAlargeGscaleidentificationofdirecttargetsofthetomato MADSBoxtranscriptionfactor
RIPENINGINHIBITORrevealstheregulationoffruitripeningPlantCell201325371mdash386[50]DubosCStrackeRGrotewoldEetalMYBtranscriptionfactorsinArabidopsisTrendsinPlantScience201015573mdash581[51]ZhuFLuoTLiuCetalAnR2R3GMYBtranscriptionfactorrepressesthetransformationofalphaGandbetaGbranchcarotenoidsby
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flowersNewPhytologist20162091049mdash1057[53]JaakolaLNewinsightsintotheregulationofanthocyaninbiosynthesisinfruitsTrendsinPlantScience201318477mdash482[54]JiangGYanHWuFetalLitchifruitLcNAC1isatargetofLcMYC2andregulatoroffruitsenescencethroughitsinteractionwith
LcWRKY1PlantandCellPhysiology2017581075mdash1089[55]MengCYangDMaXetalSuppressionoftomatoSlNAC1transcriptionfactordelaysfruitripeningJournalofPlantPhysiology
201619388mdash96[56]ShanWKuangJFChenLetalMolecularcharacterizationofbananaNACtranscriptionfactorsandtheirinteractionswithethylene
signallingcomponentEILduringfruitripeningJournalofExperimentalBotany2012635171mdash5187[57]ZhuMChenGZhouSetalAnewtomatoNAC (NAMATAF12CUC2)transcriptionfactorSlNAC4functionsasapositive
regulatoroffruitripeningandcarotenoidaccumulationPlantandCellPhysiology201455119mdash135[58]FuCCHanYCKuangJFetalPapayaCpEIN3aandCpNAC2cooperativelyregulatecarotenoidbiosynthesisrelatedgenesCpPDS2
4CpLCYGeandCpCHYGbduringfruitripeningPlantandCellPhysiology2017582155mdash2165[59]LuoZZhangJLiJetalASTAYGGREENproteinSlSGR1regulateslycopeneandbetaGcaroteneaccumulationbyinteractingdirectly
withSlPSY1duringripeningprocessesintomatoNewPhytologist2013198442mdash452[60]ToledoGOrtizGHuqERodriguezGConcepcionMDirectregulationofphytoenesynthasegeneexpressionandcarotenoidbiosynthesisby
phytochromeGinteractingfactorsProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica201010711626mdash
11631[61]WelschRMaassDVoegelTetalTranscriptionfactorRAP22anditsinteractingpartnerSINAT2Stableelementsinthe
carotenogenesisofArabidopsisleavesPlantPhysiology20071451073mdash1085[62]EndoTFujiiHSugiyamaAetalOverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor (CubHLH1)whichis
homologoustoArabidopsisactivationGtaggedbri1suppressor1interactingfactorgenesmodulatescarotenoidmetabolismintransgenictomatoPlantScience201624335mdash48
[63]LiuLJiaCZhang MetalEctopicexpressionofaBZR1G1DtranscriptionfactorinbrassinosteroidsignallingenhancescarotenoidaccumulationandfruitqualityattributesintomatoPlantBiotechnologyJournal201412105mdash115
[64]CazzonelliCICuttrissAJCossettoSBetalRegulationofcarotenoidcompositionandshootbranchinginarabidopsisbyachromatinmodifyinghistonemethyltransferaseSDG8PlantCell20092139mdash53
[65]AlvarezDVossBMaassDetalCarotenogenesisisregulatedby51049011UTRGmediatedtranslationofphytoenesynthasesplicevariantsPlantPhysiology20161722314mdash2326
[66]KaurSSpillaneCReductionincarotenoidlevelsinthemarinediatomPhaeodactylumtricornutum byartificialmicroRNAstargetedagainsttheendogenousphytoenesynthasegeneMarineBiotechnology2015171mdash7
[67]BaiCRiveraSMMedinaVetalAninvitrosystemfortherapidfunctionalcharacterizationofgenesinvolvedincarotenoidbiosynthesisandaccumulationPlantJournal201477464mdash475
[68]KimSHAhnYOAhnMJetalCloningandcharacterizationofanOrangegenethatincreasescarotenoidaccumulationandsaltstresstoleranceintransgenicsweetpotatoculturesPlantPhysiologyandBiochemistry201370445mdash454
[69]ZhouXWelschRYang YetalArabidopsisORproteinsarethemajorposttranscriptionalregulatorsofphytoenesynthaseincontrollingcarotenoidbiosynthesisProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica20151123558mdash
3563[70]WelschRZhouXYuanHetalClpproteaseandORdirectlycontroltheproteostasisofphytoenesynthasethecrucialenzymefor
carotenoidbiosynthesisinArabidopsisMolecularPlant201811149mdash162
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[71]PulidoPToledoGOrtizGPhillipsMAetalArabidopsisJGProteinJ20deliversthefirstenzymeoftheplastidialisoprenoidpathwaytoproteinqualitycontrolPlantCell2013254183mdash4194
[72]PrasannaVPrabhaTNTharanathanRNFruitripeningphenomenamdashAnoverviewCriticalReviewsinFoodScienceandNutrition
2007471mdash19[73]FujisawaMShimaYHiguchiNetalDirecttargetsofthetomatoGripeningregulatorRINidentifiedbytranscriptomeandchromatin
immunoprecipitationanalysesPlanta20122351107mdash1122[74]KarlovaRRosinFMBusscherGLangeJetalTranscriptomeandmetaboliteprofilingshowthatAPETALA2aisamajorregulatorof
tomatofruitripeningPlantCell201123923mdash941[75]LeeJMJoungJGMcQuinnRetalCombinedtranscriptomegeneticdiversityandmetaboliteprofilingintomatofruitrevealsthatthe
ethyleneresponsefactorSlERF6playsanimportantroleinripeningandcarotenoidaccumulationPlantJournal201270191mdash204[76]ShimaYFujisawaMKitagawaMetalTomatoFRUITFULLhomologsregulatefruitripeningviaethylenebiosynthesisBioscience
BiotechnologyandBiochemistry201478231mdash237[77]VrebalovJPanILArroyoAJMetalFleshyfruitexpansionandripeningareregulatedbythetomatoSHATTERPROOFgene
TAGL1PlantCell2009213041mdash3062[78]WangSLuGHouZetalMembersofthetomatoFRUITFULL MADSGboxfamilyregulatestyleabscissionandfruitripening
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viniferaL)andtheproposedroleofauxinconjugationduringripeningJournalofExperimentalBotany2010613615mdash3625[82]SuLDirettoGPurgattoEetalCarotenoidaccumulationduringtomatofruitripeningismodulatedbytheauxinGethylenebalance
BMCPlantBiology201515[83]WengLZhaoFLiRetalThezincfingertranscriptionfactorSlZFP2negativelyregulatesabscisicacidbiosynthesisandfruitripening
intomatoPlantPhysiology2015167931mdash949[84]JiaHFChaiYMLiCLetalAbscisicacidplaysanimportantroleintheregulationofstrawberryfruitripeningPlantPhysiology
2011157188mdash199[85]CreelmanRAMulletJEBiosynthesisandactionofjasmonatesinplantsAnnualReviewofPlantPhysiologyandPlantMolecular
Biology199748355mdash381[86]LiTXuYZhangLetalThejasmonateGactivatedtranscriptionfactorMdMYC2regulatesETHYLENERESPONSEFACTORand
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ExperimentalBotany2012635751mdash5761
DuanXuewu
ProfDuanXuewureceivedhisPhDdegreefromtheGraduateSchoolof
ChineseAcademyofSciencesin2004Heiscurrentlyaprofessorof
South China Botanical GardenChinese Academy ofSciencesHis
researchinterestsincludebiochemistryandmolecularbiologyinrelation
to ripeningsenescence and deterioration of postharvestfruits and
vegetablesespeciallytranscriptionalregulationandposttranscriptional
modificationanddevelopmentofstorageandhandlingtechniquesin
subtropicalandtropicalfruitHewasthePrincipalInvestigatorofmore
than20projectsfromthegovernmentUptonowhehaspublishedmorethan90papersandhasbeen
patented29inventionpatentsincludinganUSApatent
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60 Vol26No12018 SCIENCEFOUNDATIONINCHINA
TheR2R3GMYBTFsplaykeyrolesinregulatingplantGspecificprocessesincludingprimaryandsecondarymetabolismgrowthanddevelopmentandresponsetoabioticandbioticstresses [50]IncitrusCrMYB68an R2R3GMYBtranscriptionalfactorcandirectlybindandnegativelyregulateCrBCH2resultinginthedelayinthetransformationofαGandβGcaroteneandtheinhibitionofpeeldeGgreeningincitrus[51]SimilarlySagawaetalidentifiedanR2R3GMYBtranscriptionfactorReducedCarotenoidPigmentation1(RCP1)whichpositivelyregulatescarotenoidbiosynthesisduringMimuluslewisiiflowerdevelopmentLossGofGfunctionmutationsinRCP1resultindownGregulationofallcarotenoidbiosyntheticgenesandreducecarotenoidcontentwhileoverexpressionofthisgeneinthercp1 mutantbackgroundrestorescarotenoidproduction[52]Thereforeinadditiontoregulatinganthocyanins[53]R2R3GMYBisalsoinvolvedintheregulationofcarotenoidbiosynthesisinfruits
NAMATAF12andCUC2 (NAC)transcriptionfactorsareoneofthelargestfamiliesofplantGspecifictranscription factors which areimplicated in plant growth and developmentflavonoidbiosynthesiswoodformationandstressresponses [54]TheroleofNACtranscriptionfactorsinregulatingfruitripeningandsenescencehasbeenreportedintomato[55]banana[56]andlitchi[54]IntomatoSlNAC1and SlNAC4 positivelyregulatetomatofruitripeningbutexhibitdifferentialcharacteristicsAntisensesuppression ofSlNAC1 resultsin delayed ethylene production andfruitripeningbuthigherlevelsofethylenebiosynthesisandaccumulationoftotalcarotenoidandlycopeneaccompaniedbyupGregulatedexpressionofgenesrelatedtolycopeneandethylenebiosynthesis [55]DifferentfromSlNAC1reducedexpressionofSlNAC4byRNAinterference(RNAi)intomatodelayedfruitripeningdecreasedethylenesynthesisandreducedcarotenoidsbyalteringcarotenoidpathwayflux[57]AdditionallyFuetalreportedthatpapayaCpNAC2actsasatranscriptionalactivatorofCpPDS24CpZDSCpLCYGeandCpCHYGb by directly bindingtotheirpromotersand promotestheirtranscription[58]
SomeothertranscriptionfactorshavealsobeenreportedtobeinvolvedinthetranscriptionalregulationofstructuregenesinthecarotenoidbiosynthesispathwayIntomatoSlSGR1aSTAYGGREENproteinphysicallyinteracts with PSY1 to suppress PSY1 expressionthus negatively regulatinglycopeneproductionduringfruitripening[59]PhytochromeGinteractingfactor1downGregulatetheaccumulationofcarotenoidbybindingtothepromoterofPSYandrepressingPSYexpressioninArabidopsisseedlings[60]SimilarlyAtPAP22amemberoftheAPETALA2 (AP2)ethyleneGresponsiveelementGbindingproteintranscriptionfactorfamilydirectlybinds withthepromotersofPSY andPDS toregulatecarotenoidbiosynthesisinArabidopsis [61]PapayaCpEIN3aanethyleneresponsivefactordirectlybindswiththepromotersofCpPDS4andCpCHYGbandpromotestheirtranscription[58]InadditionoverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor(CrbHLH1)intomatolowerslycopeneaccumulationanddownGregulatecarotenoidbiosyntheticgeneexpressionintomatofruit[62]EctopicexpressionofanArabidopsisBZR1G1Dtranscriptionfactorinbrassinosteroidsignalingenhancescarotenoidaccumulationandfruitqualityattributesintomato[63]42 Epigeneticmodification
EpigeneticmodificationincludingthemethylationofDNACpGislandsandthemodificationofhistonesthatassociatedwithDNAinchromosomesplayaveryimportantroleinregulatinggeneexpressionEpigeneticmodification possiblyisimplicatedinregulation ofcarotenoid biosynthesis (Figure1)Cazzonellietalreportedahistonemethyltransferaseenzyme(SET DOMAIN GROUP8SDG8)thatmethylateshistoneH3onLys4andor36(H3K4andH3K36)inArabidopsisthalianawhichisrequiredforexpressionofCRTISOgeneMutationofSDG8resultsindownGregulatedexpressionofCRTISOgeneimpairedlutein biosynthesis andincreased shoot branchingThis wasthefirstreportregardinginvolvementofepigeneticmodificationinregulationofcarotenoidbiosynthesis[64]43 AlternativeRNAsplicing
AlternativeRNAsplicingisanimportantregulationofgeneexpressioninhighereukaryotesRecentlyAlvarezetalfoundthatalternativesplicingofPSYisimplicatedinregulationofcarotenogenesisinArabidopsisArabidopsispredominantlypossessasinglePSYgenewithtwoalternativesplicevariants
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(ASV)inlength andintheexonintronretention oftheir51049011UTRsASV1 with along 51049011UTR(untranslatedregion)isinvolvedindevelopmentallyregulatedcarotenoidformationwhileASV2withashort51049011UTRispreferentiallyinduced whenanimmediateincreaseinthecarotenoidpathwayfluxisrequired[65]44 microRNAs
MicroRNAs(miRNAs)arekeyregulatorsofgeneexpressionineukaryotesandplayapivotalroleintheregulationofvariousbiologicalaswellas metabolicprocessesInterestinglyanartificialmaturemicroRNAs (amiRNAs)successfullytargetedthe PSY mRNA andreduced PSY mRNA levelinPhaeodactylumtricornutumwhichfurtherreducedthelevelsofcarotenoidsinthePtricornutumamiRNAknockdownlines[66]ItwasspeculatedthatmiRNApossiblyisinvolvedinthetranscriptionregulationofcarotenoidbiosynthesisinplants
5 PostGtranscriptionalregulationofcarotenoidsbiosynthesis
InadditiontotranscriptionregulationofstructuregenesinvolvedinthecarotenoidpathwayrecentstudieshaverevealedotherregulatorymechanismstocontrolbiosyntheticenzymelevelsandactivitiesinplantssuchaspostGtranscriptionalregulation (Figure1)Theseregulatory mechanismspossiblyarepresentduringfruitdevelopmentandripening
ORANGE(OR)isaplastidGlocalizedproteincarryingacysteineGrichzincfingerdomainPreviousstudiedshowedthatORpromotescarotenoidaccumulationincalliofrice[67]andsweetpotato [68]FurtherZhouetalfoundthatArabidopsisORandPSYphysicallyinteractwitheachotherinplastidsresultingin minimaleffecton expression ofPSY gene [69]Howeveroverexpression of AtORsignificantlyincreasedtheamountofenzymaticallyactivePSYwhereasanatoratorGlikedoublemutantexhibitsadramaticallyreducedPSYlevelTheresultrevealedanovelmechanismunderlyingregulationofcarotenoidbiosynthesisviaposttranscriptionalmodificationofPSYinplants[69]
Inanotherimportantliterature on postGtranscriptionalregulation Welsch et alreported thatdegradationmodificationofproteinincarotenoidbiosynthesispathwayisimplicatedinregulationofcarotenoidbiosynthesisClpproteasesystemthemostabundantandcomplexsolubleproteasesystemintheplastidwasshowntotargetPSYTheabsenceofCLPC1CLPP4andCLPR1G2enhancedthelevelsofactivePSYandseveralothercarotenogenicenzymes[70]ThereforeORproteincounterbalancesClpGmediatedproteolysisinmaintainingPSYproteinhomeostasis
Theauthors1049011researchteamalsodiscoveredanindirectlypostGtranscriptionalregulatorymechanismtoregulateexpressionofPSYgeneinbananafruitSulfoxidationofproteinsbyreactiveoxygenspeciescancauseconformationalalterationorfunctionalimpairmentswhichcouldbereversedby Metsulfoxidereductase(Msr)ItwasfoundthatCaM1isasubstrateofMaMsrA7anditssulforxidationisrepairedbyMaMsrA7MaHY5G1actingasatranscriptionalrepressorofMaPSY1MaPSY2andMaPSY3inbananafruitisa CaMGbindingproteinSulfoxidationregulationof MaCaM1 by MaMsrA7altersexpressionofMaPSY1MaPSY2andMaPSY3genesbymodifyingMaHY5G1transcriptionalactivity(nopublisheddata)
TwootherproteinsalsohavebeenreportedtoberelatedtoposttranscriptionalregulationofcarotenoidbiosynthesisSlSGR1atomatoSTAYGGREENproteinregulateslycopeneaccumulationduringtomatofruitripeningviadirectinteractionwithPSY1[59]AnotherexampleisthepostGtranslationalregulationofDXSJGproteinJ20 (chaperoneproteindnaJ20)interactsdirectlywithDXSregulatingDXSproteinlevelandactivitybyidentifyingunfoldedormisfolded(damaged)formsofDXSandtargetingthemtotheHsp70systemforproperfoldingundernormalconditionsordegradationuponstress[71]
6 Hormonalregulationofcarotenoidbiosynthesis
Fruitripeningisacomplexandgeneticallyprogrammedprocesswhichinvolvesaseriesoforganolepticphysiologicaland biochemical changesresulting in the development of edible quality [72]
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62 Vol26No12018 SCIENCEFOUNDATIONINCHINA
PhytohormonesplaycrucialrolesinfruitripeningwhichhasbeenshowntoaffectcarotenoidaccumulationinfruitsMajorprogressregardingtheinvolvementofphytohormonesinregulatingcarotenoidbiosynthesishasbeenachievedinfruits
Ethyleneplaysa centralrolein climactericfruitripeningTherole ofethylenein carotenoidaccumulationinclimactericfruitshasbeenwidelystudiedIntomatoethyleneinitiatesfruitripeningresultinginarapidcolorshiftfromgreentoredwithincreasedlycopeneaccumulationanddecreasedβGxanthophyllsandchlorophyllscontentsTheroleofethyleneinregulatingcarotenoidbiosynthesisduringtomatofruitripeninginvolvesacomplexregulatorynetworkoftranscriptionfactorsRINasamasterregulatorbindstothepromotersofgenesinvolvedinfruitripeningprocessesincludingcarotenoidbiosynthesis[484973]APETALA2a(AP2a)isamemberofAP2ERFsuperfamilywhichregulatestomatofruitripeningbyregulatingethylenebiosynthesisandsignalingRepressionofAP2abyRNAinterference (RNAi)resultsin decreasedlevels ofphytoeneandlycopenebut higherβGcaroteneaccumulationconsistentwithdownGregulatedexpressionofPDSCtRGb2andCtrlSOandupGregulatedexpressionofZEP1MoreoverseveralripeningGrelatedregulatorsRIPENINGGINHIBITOR (RIN)NONGRIPENING (NOR)andCOLORLESSNONGRIPENING (CNR)functionupstreamofAP2aandpositivelyregulateitsexpression[74]SlERF6anothermemberofAP2ERFsuperfamilyisanegativeregulatorofcarotenoidaccumulationReducedexpressionofSlERF6byRNAienhancedbothcarotenoidandethylenelevelsduringfruitripening[75]InadditionthreeothertranscriptionfactorsarerelatedtotheethylenepathwayincludingTAGL1FRUITFULL1and2whichhavebeenreportedtopositivelyregulatecarotenoidaccumulationduringtomatoripening[76mdash78]
Auxinisinvolvedincellexpansionanddivisiontissuedifferentiationorgandevelopmentandarangeofphysiologicalprocess[79]Recentlyincreasingevidencesshowthatauxinalsoplaysanimportantroleinregulatingfruitripening[80]TheleveloffreeIAA (themostabundantauxin)tendstodeclinepriortotheonsetoftomatofruitripening[81]AuxinnegativelycontrolscarotenoidaccumulationintomatofruitExogenousIAA treatmentsignificantlyreduceslycopeneaccumulationbutenhancesthelevelsofneoxanthinandviolaxanthinaccompaniedbydownGregulatedexpressionofPsy1Psy3PdsZisoandCrtisoandupGregulatedexpressionofβGLcy1andCrtrGβ1 [82]Howeverwhetherauxindirectlyregulatesthegenesincarotenoidpathwayremainsunknown
Abscisicacid (ABA)isa key hormoneinvolvedintuningresponsestoabioticstressesLittleinformationisavailableabouttheinvolvementofABAinregulatingcarotenoidaccumulationduringtomatofruitripeningABA hasbeenreportedto beimplicatedinfruitripeningandinfluencecarotenoidaccumulationintomato[83]andstrawberry[84]fruit
JAssuchasmethyljasmonicacidjasmonicacidandotherderivativesareplantendogenoushormones[85]JAsalsoplayimportantrolesinfruitripeningLietalreportedthatJAinduceethyleneproductionbyMdMYC2GmediatedandMdERF3GmediatedupregulationofMdACS1gene[86]Applicationofmethyljasmonate(MeJA)increasestheaccumulationofanthocyaninβGcarotenecontentsandseveralphenoliccompounds[87]LiuetalfurtherilluminatedtheroleofJAinregulatingcarotenoidaccumulationduringtomatofruitripeningwithJAGdeficientmutants(spr2anddef1)anda35∷prosystransgenicline(35∷prosyswithincreasedJAlevelsandconstitutiveJAsignaling)andfoundthatlycopeneaccumulationissignificantlyinhibitedinspr2anddef1fruitbutenhancedin35S∷prosysfruitaccompaniedbyasimilartrendofexpressionoflycopenebiosyntheticgenes[88]Inadditionethyleneproductionisdepressedinspr2anddef1fruitbutincreasedin35S∷prosysfruitMoreovertheexogenousapplicationofMeJAtoNeverripe (Nr)an ethyleneGinsensitive mutantresultsin enhancedlycopene accumulation andexpressionoflycopenebiosyntheticgenes [88]TheseresultsindicatedthatJA promoteslycopenebiosynthesisinamannerindependentofethylene
7 Futureresearchdirections
CarotenoidmetabolismandregulationhavebeenwidelyresearchedinplantsHoweverthecarotenoidG
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SCIENCEFOUNDATIONINCHINA Vol26No12018 63
relatedstudieshavebeenmostlyfocusedonmodelspeciessuchasArabidopsisandtomatoThemolecularmechanismsunderlyingcarotenoid metabolism andregulationin otherfruitspeciesarestillpoorlyunderstoodConsideringthediversityofcarotenoidsinfruitsitisnecessarytoinvestigatethenovelgenesandregulationmechanismsrelatedtocarotenoidbiosynthesisinplants
Carotenoid accumulation is cooperatively controlled at multiple levelsincluding developmentalprogramsenvironmentalfactorsand metabolicsignalsTranscriptionfactorsplayimportantroleinregulatingcarotenoidbiosynthesisHoweveronlyafewtranscriptionfactorsinvolvedincarotenoidbiosynthesisareidentifiedandtranscriptionregulationismainlyrelatedtoexpressionofPSYMoreovermostofthesetranscriptionfactorsexerttheirinfluencesviaregulatingfruitripeningnotspecificcarotenoidbiosynthesisGrelated genesTheinteracting partners oftranscriptionfactorsinvolvedincarotenoidmetabolicnetworkalsoremaintobeidentifiedPostGtranscriptionalregulationalternativeRNAsplicingepigeneticmodificationandmiRNAareofimportanceinplantgrowthanddevelopmentandresponsetoabioticstressHoweverlittleinformationregardingtheinvolvementofthesemechanismsinregulating carotenoid metabolism in planteven in Arabidopsisis available Application ofphytohormonescontributestoregulatecarotenoidcontentand maintainfruitqualityinagricultureandpostharvesttreatmentThemechanismunderlyingregulationofcarotenoidmetabolismbyphytohormonesespeciallycrossGtalkamongdifferentphytohormonesarestillfarfrombeingunderstoodInthefuturestudiesbetterunderstandingofcarotenoid metabolismandregulationinfruitswillnotonlyhaveanimportantimpactongeneticimprovementandpostharvesttreatmentbutalsowillstrengthenknowledgeofcarotenoidregulationinplants
Acknowledgements
ThisworkwassupportedbytheNationalNaturalScienceFoundationofChina(GrantNos3177204131322044and31501545)ScienceandTechnologyPlanningProjectofGuangdongProvince(GrantNo2015B090901058)ScienceandTechnologyPlanningProjectofGuangzhou (GrantNo201604020048)andTalentProgramofGuangdongProvince(No2014TX01N049)
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64 Vol26No12018 SCIENCEFOUNDATIONINCHINA
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[43]PengGWangCSongSetalTheroleof1GdeoxyGDGxyluloseG5GphosphatesynthaseandphytoenesynthasegenefamilyincitruscarotenoidaccumulationPlantPhysiologyandBiochemistry20137167mdash76
[44]ZhaoDZhouCTaoJCarotenoidaccumulationandcarotenogenicgenesexpressionduringtwotypesofpersimmonfruit(DiospyroskakiL)developmentPlantMolecularBiologyReporter201129646mdash654
[45]MlalaziBWelschRNamanyaPetalIsolationandfunctionalcharacterisationofbananaphytoenesynthasegenesaspotentialcisgenesPlanta20122361585mdash1598
[46]NeumanHGalpazNCunningham FXetalThetomatomutationnxd1revealsagenenecessaryforneoxanthinbiosynthesisanddemonstratesthatviolaxanthinisasufficientprecursorforabscisicacidbiosynthesisPlantJournal20147880mdash93
[47]VrebalovJRuezinskyDPadmanabhanVetalA MADSGboxgenenecessaryforfruitripeningatthetomatoripeningGinhibitor(Rin)
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promotersinvolvedinnumerousripeningprocessesinaCOLORLESSNONRIPENINGGdependentmannerPlantPhysiology2011157
1568mdash1579[49]Fujisawa MNakanoTShimaYetalAlargeGscaleidentificationofdirecttargetsofthetomato MADSBoxtranscriptionfactor
RIPENINGINHIBITORrevealstheregulationoffruitripeningPlantCell201325371mdash386[50]DubosCStrackeRGrotewoldEetalMYBtranscriptionfactorsinArabidopsisTrendsinPlantScience201015573mdash581[51]ZhuFLuoTLiuCetalAnR2R3GMYBtranscriptionfactorrepressesthetransformationofalphaGandbetaGbranchcarotenoidsby
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flowersNewPhytologist20162091049mdash1057[53]JaakolaLNewinsightsintotheregulationofanthocyaninbiosynthesisinfruitsTrendsinPlantScience201318477mdash482[54]JiangGYanHWuFetalLitchifruitLcNAC1isatargetofLcMYC2andregulatoroffruitsenescencethroughitsinteractionwith
LcWRKY1PlantandCellPhysiology2017581075mdash1089[55]MengCYangDMaXetalSuppressionoftomatoSlNAC1transcriptionfactordelaysfruitripeningJournalofPlantPhysiology
201619388mdash96[56]ShanWKuangJFChenLetalMolecularcharacterizationofbananaNACtranscriptionfactorsandtheirinteractionswithethylene
signallingcomponentEILduringfruitripeningJournalofExperimentalBotany2012635171mdash5187[57]ZhuMChenGZhouSetalAnewtomatoNAC (NAMATAF12CUC2)transcriptionfactorSlNAC4functionsasapositive
regulatoroffruitripeningandcarotenoidaccumulationPlantandCellPhysiology201455119mdash135[58]FuCCHanYCKuangJFetalPapayaCpEIN3aandCpNAC2cooperativelyregulatecarotenoidbiosynthesisrelatedgenesCpPDS2
4CpLCYGeandCpCHYGbduringfruitripeningPlantandCellPhysiology2017582155mdash2165[59]LuoZZhangJLiJetalASTAYGGREENproteinSlSGR1regulateslycopeneandbetaGcaroteneaccumulationbyinteractingdirectly
withSlPSY1duringripeningprocessesintomatoNewPhytologist2013198442mdash452[60]ToledoGOrtizGHuqERodriguezGConcepcionMDirectregulationofphytoenesynthasegeneexpressionandcarotenoidbiosynthesisby
phytochromeGinteractingfactorsProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica201010711626mdash
11631[61]WelschRMaassDVoegelTetalTranscriptionfactorRAP22anditsinteractingpartnerSINAT2Stableelementsinthe
carotenogenesisofArabidopsisleavesPlantPhysiology20071451073mdash1085[62]EndoTFujiiHSugiyamaAetalOverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor (CubHLH1)whichis
homologoustoArabidopsisactivationGtaggedbri1suppressor1interactingfactorgenesmodulatescarotenoidmetabolismintransgenictomatoPlantScience201624335mdash48
[63]LiuLJiaCZhang MetalEctopicexpressionofaBZR1G1DtranscriptionfactorinbrassinosteroidsignallingenhancescarotenoidaccumulationandfruitqualityattributesintomatoPlantBiotechnologyJournal201412105mdash115
[64]CazzonelliCICuttrissAJCossettoSBetalRegulationofcarotenoidcompositionandshootbranchinginarabidopsisbyachromatinmodifyinghistonemethyltransferaseSDG8PlantCell20092139mdash53
[65]AlvarezDVossBMaassDetalCarotenogenesisisregulatedby51049011UTRGmediatedtranslationofphytoenesynthasesplicevariantsPlantPhysiology20161722314mdash2326
[66]KaurSSpillaneCReductionincarotenoidlevelsinthemarinediatomPhaeodactylumtricornutum byartificialmicroRNAstargetedagainsttheendogenousphytoenesynthasegeneMarineBiotechnology2015171mdash7
[67]BaiCRiveraSMMedinaVetalAninvitrosystemfortherapidfunctionalcharacterizationofgenesinvolvedincarotenoidbiosynthesisandaccumulationPlantJournal201477464mdash475
[68]KimSHAhnYOAhnMJetalCloningandcharacterizationofanOrangegenethatincreasescarotenoidaccumulationandsaltstresstoleranceintransgenicsweetpotatoculturesPlantPhysiologyandBiochemistry201370445mdash454
[69]ZhouXWelschRYang YetalArabidopsisORproteinsarethemajorposttranscriptionalregulatorsofphytoenesynthaseincontrollingcarotenoidbiosynthesisProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica20151123558mdash
3563[70]WelschRZhouXYuanHetalClpproteaseandORdirectlycontroltheproteostasisofphytoenesynthasethecrucialenzymefor
carotenoidbiosynthesisinArabidopsisMolecularPlant201811149mdash162
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66 Vol26No12018 SCIENCEFOUNDATIONINCHINA
[71]PulidoPToledoGOrtizGPhillipsMAetalArabidopsisJGProteinJ20deliversthefirstenzymeoftheplastidialisoprenoidpathwaytoproteinqualitycontrolPlantCell2013254183mdash4194
[72]PrasannaVPrabhaTNTharanathanRNFruitripeningphenomenamdashAnoverviewCriticalReviewsinFoodScienceandNutrition
2007471mdash19[73]FujisawaMShimaYHiguchiNetalDirecttargetsofthetomatoGripeningregulatorRINidentifiedbytranscriptomeandchromatin
immunoprecipitationanalysesPlanta20122351107mdash1122[74]KarlovaRRosinFMBusscherGLangeJetalTranscriptomeandmetaboliteprofilingshowthatAPETALA2aisamajorregulatorof
tomatofruitripeningPlantCell201123923mdash941[75]LeeJMJoungJGMcQuinnRetalCombinedtranscriptomegeneticdiversityandmetaboliteprofilingintomatofruitrevealsthatthe
ethyleneresponsefactorSlERF6playsanimportantroleinripeningandcarotenoidaccumulationPlantJournal201270191mdash204[76]ShimaYFujisawaMKitagawaMetalTomatoFRUITFULLhomologsregulatefruitripeningviaethylenebiosynthesisBioscience
BiotechnologyandBiochemistry201478231mdash237[77]VrebalovJPanILArroyoAJMetalFleshyfruitexpansionandripeningareregulatedbythetomatoSHATTERPROOFgene
TAGL1PlantCell2009213041mdash3062[78]WangSLuGHouZetalMembersofthetomatoFRUITFULL MADSGboxfamilyregulatestyleabscissionandfruitripening
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participatesinIAAbiosynthesisduringfruitripeningJournalofExperimentalBotany2015667031mdash7044[81]BoettcherCKeyzersRABossPKetalSequestrationofauxinbytheindoleG3GaceticacidGamidosynthetaseGH3G1ingrapeberry(Vitis
viniferaL)andtheproposedroleofauxinconjugationduringripeningJournalofExperimentalBotany2010613615mdash3625[82]SuLDirettoGPurgattoEetalCarotenoidaccumulationduringtomatofruitripeningismodulatedbytheauxinGethylenebalance
BMCPlantBiology201515[83]WengLZhaoFLiRetalThezincfingertranscriptionfactorSlZFP2negativelyregulatesabscisicacidbiosynthesisandfruitripening
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2011157188mdash199[85]CreelmanRAMulletJEBiosynthesisandactionofjasmonatesinplantsAnnualReviewofPlantPhysiologyandPlantMolecular
Biology199748355mdash381[86]LiTXuYZhangLetalThejasmonateGactivatedtranscriptionfactorMdMYC2regulatesETHYLENERESPONSEFACTORand
ethylenebiosyntheticgenestopromoteethylenebiosynthesisduringapplefruitripeningPlantCell2017291316mdash1334[87]RudellDRMattheisJPFanXetalMethyljasmonateenhancesanthocyaninaccumulationandmodifiesproductionofphenolicsand
pigmentsinlsquoFujirsquoapplesJournaloftheAmericanSocietyforHorticulturalScience2002127435mdash441[88]LiuLWeiJZhang MetalEthyleneindependentinductionoflycopenebiosynthesisintomatofruitsbyjasmonatesJournalof
ExperimentalBotany2012635751mdash5761
DuanXuewu
ProfDuanXuewureceivedhisPhDdegreefromtheGraduateSchoolof
ChineseAcademyofSciencesin2004Heiscurrentlyaprofessorof
South China Botanical GardenChinese Academy ofSciencesHis
researchinterestsincludebiochemistryandmolecularbiologyinrelation
to ripeningsenescence and deterioration of postharvestfruits and
vegetablesespeciallytranscriptionalregulationandposttranscriptional
modificationanddevelopmentofstorageandhandlingtechniquesin
subtropicalandtropicalfruitHewasthePrincipalInvestigatorofmore
than20projectsfromthegovernmentUptonowhehaspublishedmorethan90papersandhasbeen
patented29inventionpatentsincludinganUSApatent
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SCIENCEFOUNDATIONINCHINA Vol26No12018 61
(ASV)inlength andintheexonintronretention oftheir51049011UTRsASV1 with along 51049011UTR(untranslatedregion)isinvolvedindevelopmentallyregulatedcarotenoidformationwhileASV2withashort51049011UTRispreferentiallyinduced whenanimmediateincreaseinthecarotenoidpathwayfluxisrequired[65]44 microRNAs
MicroRNAs(miRNAs)arekeyregulatorsofgeneexpressionineukaryotesandplayapivotalroleintheregulationofvariousbiologicalaswellas metabolicprocessesInterestinglyanartificialmaturemicroRNAs (amiRNAs)successfullytargetedthe PSY mRNA andreduced PSY mRNA levelinPhaeodactylumtricornutumwhichfurtherreducedthelevelsofcarotenoidsinthePtricornutumamiRNAknockdownlines[66]ItwasspeculatedthatmiRNApossiblyisinvolvedinthetranscriptionregulationofcarotenoidbiosynthesisinplants
5 PostGtranscriptionalregulationofcarotenoidsbiosynthesis
InadditiontotranscriptionregulationofstructuregenesinvolvedinthecarotenoidpathwayrecentstudieshaverevealedotherregulatorymechanismstocontrolbiosyntheticenzymelevelsandactivitiesinplantssuchaspostGtranscriptionalregulation (Figure1)Theseregulatory mechanismspossiblyarepresentduringfruitdevelopmentandripening
ORANGE(OR)isaplastidGlocalizedproteincarryingacysteineGrichzincfingerdomainPreviousstudiedshowedthatORpromotescarotenoidaccumulationincalliofrice[67]andsweetpotato [68]FurtherZhouetalfoundthatArabidopsisORandPSYphysicallyinteractwitheachotherinplastidsresultingin minimaleffecton expression ofPSY gene [69]Howeveroverexpression of AtORsignificantlyincreasedtheamountofenzymaticallyactivePSYwhereasanatoratorGlikedoublemutantexhibitsadramaticallyreducedPSYlevelTheresultrevealedanovelmechanismunderlyingregulationofcarotenoidbiosynthesisviaposttranscriptionalmodificationofPSYinplants[69]
Inanotherimportantliterature on postGtranscriptionalregulation Welsch et alreported thatdegradationmodificationofproteinincarotenoidbiosynthesispathwayisimplicatedinregulationofcarotenoidbiosynthesisClpproteasesystemthemostabundantandcomplexsolubleproteasesystemintheplastidwasshowntotargetPSYTheabsenceofCLPC1CLPP4andCLPR1G2enhancedthelevelsofactivePSYandseveralothercarotenogenicenzymes[70]ThereforeORproteincounterbalancesClpGmediatedproteolysisinmaintainingPSYproteinhomeostasis
Theauthors1049011researchteamalsodiscoveredanindirectlypostGtranscriptionalregulatorymechanismtoregulateexpressionofPSYgeneinbananafruitSulfoxidationofproteinsbyreactiveoxygenspeciescancauseconformationalalterationorfunctionalimpairmentswhichcouldbereversedby Metsulfoxidereductase(Msr)ItwasfoundthatCaM1isasubstrateofMaMsrA7anditssulforxidationisrepairedbyMaMsrA7MaHY5G1actingasatranscriptionalrepressorofMaPSY1MaPSY2andMaPSY3inbananafruitisa CaMGbindingproteinSulfoxidationregulationof MaCaM1 by MaMsrA7altersexpressionofMaPSY1MaPSY2andMaPSY3genesbymodifyingMaHY5G1transcriptionalactivity(nopublisheddata)
TwootherproteinsalsohavebeenreportedtoberelatedtoposttranscriptionalregulationofcarotenoidbiosynthesisSlSGR1atomatoSTAYGGREENproteinregulateslycopeneaccumulationduringtomatofruitripeningviadirectinteractionwithPSY1[59]AnotherexampleisthepostGtranslationalregulationofDXSJGproteinJ20 (chaperoneproteindnaJ20)interactsdirectlywithDXSregulatingDXSproteinlevelandactivitybyidentifyingunfoldedormisfolded(damaged)formsofDXSandtargetingthemtotheHsp70systemforproperfoldingundernormalconditionsordegradationuponstress[71]
6 Hormonalregulationofcarotenoidbiosynthesis
Fruitripeningisacomplexandgeneticallyprogrammedprocesswhichinvolvesaseriesoforganolepticphysiologicaland biochemical changesresulting in the development of edible quality [72]
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62 Vol26No12018 SCIENCEFOUNDATIONINCHINA
PhytohormonesplaycrucialrolesinfruitripeningwhichhasbeenshowntoaffectcarotenoidaccumulationinfruitsMajorprogressregardingtheinvolvementofphytohormonesinregulatingcarotenoidbiosynthesishasbeenachievedinfruits
Ethyleneplaysa centralrolein climactericfruitripeningTherole ofethylenein carotenoidaccumulationinclimactericfruitshasbeenwidelystudiedIntomatoethyleneinitiatesfruitripeningresultinginarapidcolorshiftfromgreentoredwithincreasedlycopeneaccumulationanddecreasedβGxanthophyllsandchlorophyllscontentsTheroleofethyleneinregulatingcarotenoidbiosynthesisduringtomatofruitripeninginvolvesacomplexregulatorynetworkoftranscriptionfactorsRINasamasterregulatorbindstothepromotersofgenesinvolvedinfruitripeningprocessesincludingcarotenoidbiosynthesis[484973]APETALA2a(AP2a)isamemberofAP2ERFsuperfamilywhichregulatestomatofruitripeningbyregulatingethylenebiosynthesisandsignalingRepressionofAP2abyRNAinterference (RNAi)resultsin decreasedlevels ofphytoeneandlycopenebut higherβGcaroteneaccumulationconsistentwithdownGregulatedexpressionofPDSCtRGb2andCtrlSOandupGregulatedexpressionofZEP1MoreoverseveralripeningGrelatedregulatorsRIPENINGGINHIBITOR (RIN)NONGRIPENING (NOR)andCOLORLESSNONGRIPENING (CNR)functionupstreamofAP2aandpositivelyregulateitsexpression[74]SlERF6anothermemberofAP2ERFsuperfamilyisanegativeregulatorofcarotenoidaccumulationReducedexpressionofSlERF6byRNAienhancedbothcarotenoidandethylenelevelsduringfruitripening[75]InadditionthreeothertranscriptionfactorsarerelatedtotheethylenepathwayincludingTAGL1FRUITFULL1and2whichhavebeenreportedtopositivelyregulatecarotenoidaccumulationduringtomatoripening[76mdash78]
Auxinisinvolvedincellexpansionanddivisiontissuedifferentiationorgandevelopmentandarangeofphysiologicalprocess[79]Recentlyincreasingevidencesshowthatauxinalsoplaysanimportantroleinregulatingfruitripening[80]TheleveloffreeIAA (themostabundantauxin)tendstodeclinepriortotheonsetoftomatofruitripening[81]AuxinnegativelycontrolscarotenoidaccumulationintomatofruitExogenousIAA treatmentsignificantlyreduceslycopeneaccumulationbutenhancesthelevelsofneoxanthinandviolaxanthinaccompaniedbydownGregulatedexpressionofPsy1Psy3PdsZisoandCrtisoandupGregulatedexpressionofβGLcy1andCrtrGβ1 [82]Howeverwhetherauxindirectlyregulatesthegenesincarotenoidpathwayremainsunknown
Abscisicacid (ABA)isa key hormoneinvolvedintuningresponsestoabioticstressesLittleinformationisavailableabouttheinvolvementofABAinregulatingcarotenoidaccumulationduringtomatofruitripeningABA hasbeenreportedto beimplicatedinfruitripeningandinfluencecarotenoidaccumulationintomato[83]andstrawberry[84]fruit
JAssuchasmethyljasmonicacidjasmonicacidandotherderivativesareplantendogenoushormones[85]JAsalsoplayimportantrolesinfruitripeningLietalreportedthatJAinduceethyleneproductionbyMdMYC2GmediatedandMdERF3GmediatedupregulationofMdACS1gene[86]Applicationofmethyljasmonate(MeJA)increasestheaccumulationofanthocyaninβGcarotenecontentsandseveralphenoliccompounds[87]LiuetalfurtherilluminatedtheroleofJAinregulatingcarotenoidaccumulationduringtomatofruitripeningwithJAGdeficientmutants(spr2anddef1)anda35∷prosystransgenicline(35∷prosyswithincreasedJAlevelsandconstitutiveJAsignaling)andfoundthatlycopeneaccumulationissignificantlyinhibitedinspr2anddef1fruitbutenhancedin35S∷prosysfruitaccompaniedbyasimilartrendofexpressionoflycopenebiosyntheticgenes[88]Inadditionethyleneproductionisdepressedinspr2anddef1fruitbutincreasedin35S∷prosysfruitMoreovertheexogenousapplicationofMeJAtoNeverripe (Nr)an ethyleneGinsensitive mutantresultsin enhancedlycopene accumulation andexpressionoflycopenebiosyntheticgenes [88]TheseresultsindicatedthatJA promoteslycopenebiosynthesisinamannerindependentofethylene
7 Futureresearchdirections
CarotenoidmetabolismandregulationhavebeenwidelyresearchedinplantsHoweverthecarotenoidG
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SCIENCEFOUNDATIONINCHINA Vol26No12018 63
relatedstudieshavebeenmostlyfocusedonmodelspeciessuchasArabidopsisandtomatoThemolecularmechanismsunderlyingcarotenoid metabolism andregulationin otherfruitspeciesarestillpoorlyunderstoodConsideringthediversityofcarotenoidsinfruitsitisnecessarytoinvestigatethenovelgenesandregulationmechanismsrelatedtocarotenoidbiosynthesisinplants
Carotenoid accumulation is cooperatively controlled at multiple levelsincluding developmentalprogramsenvironmentalfactorsand metabolicsignalsTranscriptionfactorsplayimportantroleinregulatingcarotenoidbiosynthesisHoweveronlyafewtranscriptionfactorsinvolvedincarotenoidbiosynthesisareidentifiedandtranscriptionregulationismainlyrelatedtoexpressionofPSYMoreovermostofthesetranscriptionfactorsexerttheirinfluencesviaregulatingfruitripeningnotspecificcarotenoidbiosynthesisGrelated genesTheinteracting partners oftranscriptionfactorsinvolvedincarotenoidmetabolicnetworkalsoremaintobeidentifiedPostGtranscriptionalregulationalternativeRNAsplicingepigeneticmodificationandmiRNAareofimportanceinplantgrowthanddevelopmentandresponsetoabioticstressHoweverlittleinformationregardingtheinvolvementofthesemechanismsinregulating carotenoid metabolism in planteven in Arabidopsisis available Application ofphytohormonescontributestoregulatecarotenoidcontentand maintainfruitqualityinagricultureandpostharvesttreatmentThemechanismunderlyingregulationofcarotenoidmetabolismbyphytohormonesespeciallycrossGtalkamongdifferentphytohormonesarestillfarfrombeingunderstoodInthefuturestudiesbetterunderstandingofcarotenoid metabolismandregulationinfruitswillnotonlyhaveanimportantimpactongeneticimprovementandpostharvesttreatmentbutalsowillstrengthenknowledgeofcarotenoidregulationinplants
Acknowledgements
ThisworkwassupportedbytheNationalNaturalScienceFoundationofChina(GrantNos3177204131322044and31501545)ScienceandTechnologyPlanningProjectofGuangdongProvince(GrantNo2015B090901058)ScienceandTechnologyPlanningProjectofGuangzhou (GrantNo201604020048)andTalentProgramofGuangdongProvince(No2014TX01N049)
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[11]Rodrigo MJCillaABarberaRetalCarotenoidbioaccessibilityinpulpandfreshjuicefromcarotenoidGrichsweetorangesandmandarinsFoodampFunction201561950mdash1959
[12]FuXFengCWangCetalInvolvementofmultiplephytoenesynthasegenesintissueGandcultivarGspecificaccumulationofcarotenoidsinloquatJournalofExperimentalBotany2014654679mdash4689
[13]DelgadoGPelayoRGallardoGGuerreroLHorneroGMendezDChlorophyllandcarotenoidpigmentsinthepeelandfleshofcommercialapplefruitvarietiesFoodResearchInternational201465272mdash281
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64 Vol26No12018 SCIENCEFOUNDATIONINCHINA
[14]SinghBSinghJPKaurAetalBioactivecompoundsinbananaandtheirassociatedhealthbenefitsmdashAreviewFoodChemistry2016
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accumulationinfruitJournalofExperimentalBotany2009603765mdash3779[21]AjilaCMRaoLJRaoUJSPCharacterizationofbioactivecompoundsfromrawandripeMangiferaindicaLpeelextractsFoodand
ChemicalToxicology2010483406mdash3411[22]TuanPAKimJKParkNIetalCarotenoidcontentandexpressionofphytoenesynthaseandphytoenedesaturasegenesinbittermelon
(Momordicacharantia)FoodChemistry20111261686mdash1692[23]SchweiggertRMSteingassCBHellerAetalCharacterizationofchromoplastsandcarotenoidsofredGandyellowGfleshedpapaya
(CaricapapayaL)Planta20112341031mdash1044[24]AbushitaAADaoodHGBiacsPAChangeincarotenoidsandantioxidantvitaminsintomatoasafunctionofvarietalandtechnological
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(Cucurbitaceae)withdifferentfleshcolorsFoodScienceandBiotechnology201221531mdash541[27]AlquezarBRodrigoMJLadoJetalAcomparativephysiologicalandtranscriptionalstudyofcarotenoidbiosynthesisinwhiteandred
grapefruit(CitrusparadisiMacf)TreeGeneticsamp Genomes201391257mdash1269[28]KatoMMechanismofcarotenoidaccumulationincitrusfruitJournaloftheJapaneseSocietyforHorticulturalScience201281219mdash
233[29]IsaacsonTRonenGZamirDetalCloningoftangerinefromtomatorevealsacarotenoidisomeraseessentialfortheproductionofbetaG
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SCIENCEFOUNDATIONINCHINA Vol26No12018 65
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66 Vol26No12018 SCIENCEFOUNDATIONINCHINA
[71]PulidoPToledoGOrtizGPhillipsMAetalArabidopsisJGProteinJ20deliversthefirstenzymeoftheplastidialisoprenoidpathwaytoproteinqualitycontrolPlantCell2013254183mdash4194
[72]PrasannaVPrabhaTNTharanathanRNFruitripeningphenomenamdashAnoverviewCriticalReviewsinFoodScienceandNutrition
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BiotechnologyandBiochemistry201478231mdash237[77]VrebalovJPanILArroyoAJMetalFleshyfruitexpansionandripeningareregulatedbythetomatoSHATTERPROOFgene
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ExperimentalBotany2012635751mdash5761
DuanXuewu
ProfDuanXuewureceivedhisPhDdegreefromtheGraduateSchoolof
ChineseAcademyofSciencesin2004Heiscurrentlyaprofessorof
South China Botanical GardenChinese Academy ofSciencesHis
researchinterestsincludebiochemistryandmolecularbiologyinrelation
to ripeningsenescence and deterioration of postharvestfruits and
vegetablesespeciallytranscriptionalregulationandposttranscriptional
modificationanddevelopmentofstorageandhandlingtechniquesin
subtropicalandtropicalfruitHewasthePrincipalInvestigatorofmore
than20projectsfromthegovernmentUptonowhehaspublishedmorethan90papersandhasbeen
patented29inventionpatentsincludinganUSApatent
bullReviewsbull
62 Vol26No12018 SCIENCEFOUNDATIONINCHINA
PhytohormonesplaycrucialrolesinfruitripeningwhichhasbeenshowntoaffectcarotenoidaccumulationinfruitsMajorprogressregardingtheinvolvementofphytohormonesinregulatingcarotenoidbiosynthesishasbeenachievedinfruits
Ethyleneplaysa centralrolein climactericfruitripeningTherole ofethylenein carotenoidaccumulationinclimactericfruitshasbeenwidelystudiedIntomatoethyleneinitiatesfruitripeningresultinginarapidcolorshiftfromgreentoredwithincreasedlycopeneaccumulationanddecreasedβGxanthophyllsandchlorophyllscontentsTheroleofethyleneinregulatingcarotenoidbiosynthesisduringtomatofruitripeninginvolvesacomplexregulatorynetworkoftranscriptionfactorsRINasamasterregulatorbindstothepromotersofgenesinvolvedinfruitripeningprocessesincludingcarotenoidbiosynthesis[484973]APETALA2a(AP2a)isamemberofAP2ERFsuperfamilywhichregulatestomatofruitripeningbyregulatingethylenebiosynthesisandsignalingRepressionofAP2abyRNAinterference (RNAi)resultsin decreasedlevels ofphytoeneandlycopenebut higherβGcaroteneaccumulationconsistentwithdownGregulatedexpressionofPDSCtRGb2andCtrlSOandupGregulatedexpressionofZEP1MoreoverseveralripeningGrelatedregulatorsRIPENINGGINHIBITOR (RIN)NONGRIPENING (NOR)andCOLORLESSNONGRIPENING (CNR)functionupstreamofAP2aandpositivelyregulateitsexpression[74]SlERF6anothermemberofAP2ERFsuperfamilyisanegativeregulatorofcarotenoidaccumulationReducedexpressionofSlERF6byRNAienhancedbothcarotenoidandethylenelevelsduringfruitripening[75]InadditionthreeothertranscriptionfactorsarerelatedtotheethylenepathwayincludingTAGL1FRUITFULL1and2whichhavebeenreportedtopositivelyregulatecarotenoidaccumulationduringtomatoripening[76mdash78]
Auxinisinvolvedincellexpansionanddivisiontissuedifferentiationorgandevelopmentandarangeofphysiologicalprocess[79]Recentlyincreasingevidencesshowthatauxinalsoplaysanimportantroleinregulatingfruitripening[80]TheleveloffreeIAA (themostabundantauxin)tendstodeclinepriortotheonsetoftomatofruitripening[81]AuxinnegativelycontrolscarotenoidaccumulationintomatofruitExogenousIAA treatmentsignificantlyreduceslycopeneaccumulationbutenhancesthelevelsofneoxanthinandviolaxanthinaccompaniedbydownGregulatedexpressionofPsy1Psy3PdsZisoandCrtisoandupGregulatedexpressionofβGLcy1andCrtrGβ1 [82]Howeverwhetherauxindirectlyregulatesthegenesincarotenoidpathwayremainsunknown
Abscisicacid (ABA)isa key hormoneinvolvedintuningresponsestoabioticstressesLittleinformationisavailableabouttheinvolvementofABAinregulatingcarotenoidaccumulationduringtomatofruitripeningABA hasbeenreportedto beimplicatedinfruitripeningandinfluencecarotenoidaccumulationintomato[83]andstrawberry[84]fruit
JAssuchasmethyljasmonicacidjasmonicacidandotherderivativesareplantendogenoushormones[85]JAsalsoplayimportantrolesinfruitripeningLietalreportedthatJAinduceethyleneproductionbyMdMYC2GmediatedandMdERF3GmediatedupregulationofMdACS1gene[86]Applicationofmethyljasmonate(MeJA)increasestheaccumulationofanthocyaninβGcarotenecontentsandseveralphenoliccompounds[87]LiuetalfurtherilluminatedtheroleofJAinregulatingcarotenoidaccumulationduringtomatofruitripeningwithJAGdeficientmutants(spr2anddef1)anda35∷prosystransgenicline(35∷prosyswithincreasedJAlevelsandconstitutiveJAsignaling)andfoundthatlycopeneaccumulationissignificantlyinhibitedinspr2anddef1fruitbutenhancedin35S∷prosysfruitaccompaniedbyasimilartrendofexpressionoflycopenebiosyntheticgenes[88]Inadditionethyleneproductionisdepressedinspr2anddef1fruitbutincreasedin35S∷prosysfruitMoreovertheexogenousapplicationofMeJAtoNeverripe (Nr)an ethyleneGinsensitive mutantresultsin enhancedlycopene accumulation andexpressionoflycopenebiosyntheticgenes [88]TheseresultsindicatedthatJA promoteslycopenebiosynthesisinamannerindependentofethylene
7 Futureresearchdirections
CarotenoidmetabolismandregulationhavebeenwidelyresearchedinplantsHoweverthecarotenoidG
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SCIENCEFOUNDATIONINCHINA Vol26No12018 63
relatedstudieshavebeenmostlyfocusedonmodelspeciessuchasArabidopsisandtomatoThemolecularmechanismsunderlyingcarotenoid metabolism andregulationin otherfruitspeciesarestillpoorlyunderstoodConsideringthediversityofcarotenoidsinfruitsitisnecessarytoinvestigatethenovelgenesandregulationmechanismsrelatedtocarotenoidbiosynthesisinplants
Carotenoid accumulation is cooperatively controlled at multiple levelsincluding developmentalprogramsenvironmentalfactorsand metabolicsignalsTranscriptionfactorsplayimportantroleinregulatingcarotenoidbiosynthesisHoweveronlyafewtranscriptionfactorsinvolvedincarotenoidbiosynthesisareidentifiedandtranscriptionregulationismainlyrelatedtoexpressionofPSYMoreovermostofthesetranscriptionfactorsexerttheirinfluencesviaregulatingfruitripeningnotspecificcarotenoidbiosynthesisGrelated genesTheinteracting partners oftranscriptionfactorsinvolvedincarotenoidmetabolicnetworkalsoremaintobeidentifiedPostGtranscriptionalregulationalternativeRNAsplicingepigeneticmodificationandmiRNAareofimportanceinplantgrowthanddevelopmentandresponsetoabioticstressHoweverlittleinformationregardingtheinvolvementofthesemechanismsinregulating carotenoid metabolism in planteven in Arabidopsisis available Application ofphytohormonescontributestoregulatecarotenoidcontentand maintainfruitqualityinagricultureandpostharvesttreatmentThemechanismunderlyingregulationofcarotenoidmetabolismbyphytohormonesespeciallycrossGtalkamongdifferentphytohormonesarestillfarfrombeingunderstoodInthefuturestudiesbetterunderstandingofcarotenoid metabolismandregulationinfruitswillnotonlyhaveanimportantimpactongeneticimprovementandpostharvesttreatmentbutalsowillstrengthenknowledgeofcarotenoidregulationinplants
Acknowledgements
ThisworkwassupportedbytheNationalNaturalScienceFoundationofChina(GrantNos3177204131322044and31501545)ScienceandTechnologyPlanningProjectofGuangdongProvince(GrantNo2015B090901058)ScienceandTechnologyPlanningProjectofGuangzhou (GrantNo201604020048)andTalentProgramofGuangdongProvince(No2014TX01N049)
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bullReviewsbull
64 Vol26No12018 SCIENCEFOUNDATIONINCHINA
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developmentandripeninginfourwatermeloncultivarsFoodChemistry201517452mdash59[26]Liu CZhang HDaiZetalVolatilechemicalandcarotenoidprofilesin watermelonsCitrullusvulgaris (Thunb)Schrad
(Cucurbitaceae)withdifferentfleshcolorsFoodScienceandBiotechnology201221531mdash541[27]AlquezarBRodrigoMJLadoJetalAcomparativephysiologicalandtranscriptionalstudyofcarotenoidbiosynthesisinwhiteandred
grapefruit(CitrusparadisiMacf)TreeGeneticsamp Genomes201391257mdash1269[28]KatoMMechanismofcarotenoidaccumulationincitrusfruitJournaloftheJapaneseSocietyforHorticulturalScience201281219mdash
233[29]IsaacsonTRonenGZamirDetalCloningoftangerinefromtomatorevealsacarotenoidisomeraseessentialfortheproductionofbetaG
caroteneandxanthophyllsinplantsPlantCell200214333mdash342[30]RonenGCohenMZamirDetalRegulationofcarotenoidbiosynthesisduringtomatofruitdevelopmentExpressionofthegenefor
lycopeneepsilonGcyclaseisdownGregulatedduringripeningandiselevatedinthemutantDeltaPlantJournal199917341mdash351[31]RonenGCarmelGGorenLZamirDetalAnalternativepathwaytobetaGcaroteneformationinplantchromoplastsdiscoveredbymapG
basedcloningofBetaandoldGgoldcolormutationsintomatoProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica20009711102mdash11107
[32]HorneroGMendezDdeGuevaraRGLMinguezGMosqueraMICarotenoidbiosynthesischangesinfiveredpepper(CapsicumannuumL)
cultivarsduringripeningCultivarselectionforbreedingJournalofAgriculturalandFoodChemistry2000483857mdash3864[33]GuzmanIHambySRomeroJetalVariabilityofcarotenoidbiosynthesisinorangecoloredCapsicumsppPlantScience2010179
49mdash59[34]RodriguezGUribeLGuzmanIRajapakseWetalCarotenoidaccumulationinorangeGpigmentedCapsicumannuumfruitregulatedat
multiplelevelsJournalofExperimentalBotany201263517mdash526[35]SunTYuanHCaoHetalCarotenoidmetabolisminplantstheroleofplastidsMolecularPlant20181158mdash74[36]BramleyPMRegulationofcarotenoidformationduringtomatofruitripeninganddevelopmentJournalofExperimentalBotany2002
532107mdash2113[37]EstevezJMCanteroAReindlAetal1GdeoxyGDGxyluloseG5Gphosphatesynthasealimitingenzymeforplastidicisoprenoidbiosynthesis
inplantsJournalofBiologicalChemistry200127622901mdash22909[38]BotellaGPaviaPBesumbes OPhillips MAetalRegulationofcarotenoidbiosynthesisinplantsevidenceforakeyroleof
hydroxymethylbutenyldiphosphatereductaseincontrollingthesupplyofplastidialisoprenoidprecursorsPlantJournal200440188mdash
199[39]CazzonelliCIPogsonBJSourcetosinkregulationofcarotenoidbiosynthesisinplantsTrendsinPlantScience201015266mdash274[40]FraserPDEnfissiEMAHalketJMetalManipulationofphytoenelevelsintomatofruiteffectsonisoprenoidsplastidsand
intermediarymetabolismPlantCell2007193194mdash3211[41]FraserPDRomerSKianoJWetalElevationofcarotenoidsintomatobygeneticmanipulationJournaloftheScienceofFoodand
Agriculture200181822mdash827[42]RayJMoureauPBirdCetalCloningandcharacterizaitonofageneinvolvedinphytoenesynthesisfromtomatoPlantMolecular
Biology199219401mdash404
bullReviewsbull
SCIENCEFOUNDATIONINCHINA Vol26No12018 65
[43]PengGWangCSongSetalTheroleof1GdeoxyGDGxyluloseG5GphosphatesynthaseandphytoenesynthasegenefamilyincitruscarotenoidaccumulationPlantPhysiologyandBiochemistry20137167mdash76
[44]ZhaoDZhouCTaoJCarotenoidaccumulationandcarotenogenicgenesexpressionduringtwotypesofpersimmonfruit(DiospyroskakiL)developmentPlantMolecularBiologyReporter201129646mdash654
[45]MlalaziBWelschRNamanyaPetalIsolationandfunctionalcharacterisationofbananaphytoenesynthasegenesaspotentialcisgenesPlanta20122361585mdash1598
[46]NeumanHGalpazNCunningham FXetalThetomatomutationnxd1revealsagenenecessaryforneoxanthinbiosynthesisanddemonstratesthatviolaxanthinisasufficientprecursorforabscisicacidbiosynthesisPlantJournal20147880mdash93
[47]VrebalovJRuezinskyDPadmanabhanVetalA MADSGboxgenenecessaryforfruitripeningatthetomatoripeningGinhibitor(Rin)
locusScience2002296343mdash346[48]MartelCVrebalovJTafelmeyerPetalThetomato MADSGBoxtranscriptionfactorRIPENINGINHIBITORinteractswith
promotersinvolvedinnumerousripeningprocessesinaCOLORLESSNONRIPENINGGdependentmannerPlantPhysiology2011157
1568mdash1579[49]Fujisawa MNakanoTShimaYetalAlargeGscaleidentificationofdirecttargetsofthetomato MADSBoxtranscriptionfactor
RIPENINGINHIBITORrevealstheregulationoffruitripeningPlantCell201325371mdash386[50]DubosCStrackeRGrotewoldEetalMYBtranscriptionfactorsinArabidopsisTrendsinPlantScience201015573mdash581[51]ZhuFLuoTLiuCetalAnR2R3GMYBtranscriptionfactorrepressesthetransformationofalphaGandbetaGbranchcarotenoidsby
negativelyregulatingexpressionofCrBCH2andCrNCED5inflavedoofCitrusreticulateNewPhytologist2017216178mdash192[52]SagawaJMStanleyLELaFountainAMetalAnR2R3GMYBtranscriptionfactorregulatescarotenoidpigmentationinMimuluslewisii
flowersNewPhytologist20162091049mdash1057[53]JaakolaLNewinsightsintotheregulationofanthocyaninbiosynthesisinfruitsTrendsinPlantScience201318477mdash482[54]JiangGYanHWuFetalLitchifruitLcNAC1isatargetofLcMYC2andregulatoroffruitsenescencethroughitsinteractionwith
LcWRKY1PlantandCellPhysiology2017581075mdash1089[55]MengCYangDMaXetalSuppressionoftomatoSlNAC1transcriptionfactordelaysfruitripeningJournalofPlantPhysiology
201619388mdash96[56]ShanWKuangJFChenLetalMolecularcharacterizationofbananaNACtranscriptionfactorsandtheirinteractionswithethylene
signallingcomponentEILduringfruitripeningJournalofExperimentalBotany2012635171mdash5187[57]ZhuMChenGZhouSetalAnewtomatoNAC (NAMATAF12CUC2)transcriptionfactorSlNAC4functionsasapositive
regulatoroffruitripeningandcarotenoidaccumulationPlantandCellPhysiology201455119mdash135[58]FuCCHanYCKuangJFetalPapayaCpEIN3aandCpNAC2cooperativelyregulatecarotenoidbiosynthesisrelatedgenesCpPDS2
4CpLCYGeandCpCHYGbduringfruitripeningPlantandCellPhysiology2017582155mdash2165[59]LuoZZhangJLiJetalASTAYGGREENproteinSlSGR1regulateslycopeneandbetaGcaroteneaccumulationbyinteractingdirectly
withSlPSY1duringripeningprocessesintomatoNewPhytologist2013198442mdash452[60]ToledoGOrtizGHuqERodriguezGConcepcionMDirectregulationofphytoenesynthasegeneexpressionandcarotenoidbiosynthesisby
phytochromeGinteractingfactorsProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica201010711626mdash
11631[61]WelschRMaassDVoegelTetalTranscriptionfactorRAP22anditsinteractingpartnerSINAT2Stableelementsinthe
carotenogenesisofArabidopsisleavesPlantPhysiology20071451073mdash1085[62]EndoTFujiiHSugiyamaAetalOverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor (CubHLH1)whichis
homologoustoArabidopsisactivationGtaggedbri1suppressor1interactingfactorgenesmodulatescarotenoidmetabolismintransgenictomatoPlantScience201624335mdash48
[63]LiuLJiaCZhang MetalEctopicexpressionofaBZR1G1DtranscriptionfactorinbrassinosteroidsignallingenhancescarotenoidaccumulationandfruitqualityattributesintomatoPlantBiotechnologyJournal201412105mdash115
[64]CazzonelliCICuttrissAJCossettoSBetalRegulationofcarotenoidcompositionandshootbranchinginarabidopsisbyachromatinmodifyinghistonemethyltransferaseSDG8PlantCell20092139mdash53
[65]AlvarezDVossBMaassDetalCarotenogenesisisregulatedby51049011UTRGmediatedtranslationofphytoenesynthasesplicevariantsPlantPhysiology20161722314mdash2326
[66]KaurSSpillaneCReductionincarotenoidlevelsinthemarinediatomPhaeodactylumtricornutum byartificialmicroRNAstargetedagainsttheendogenousphytoenesynthasegeneMarineBiotechnology2015171mdash7
[67]BaiCRiveraSMMedinaVetalAninvitrosystemfortherapidfunctionalcharacterizationofgenesinvolvedincarotenoidbiosynthesisandaccumulationPlantJournal201477464mdash475
[68]KimSHAhnYOAhnMJetalCloningandcharacterizationofanOrangegenethatincreasescarotenoidaccumulationandsaltstresstoleranceintransgenicsweetpotatoculturesPlantPhysiologyandBiochemistry201370445mdash454
[69]ZhouXWelschRYang YetalArabidopsisORproteinsarethemajorposttranscriptionalregulatorsofphytoenesynthaseincontrollingcarotenoidbiosynthesisProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica20151123558mdash
3563[70]WelschRZhouXYuanHetalClpproteaseandORdirectlycontroltheproteostasisofphytoenesynthasethecrucialenzymefor
carotenoidbiosynthesisinArabidopsisMolecularPlant201811149mdash162
bullReviewsbull
66 Vol26No12018 SCIENCEFOUNDATIONINCHINA
[71]PulidoPToledoGOrtizGPhillipsMAetalArabidopsisJGProteinJ20deliversthefirstenzymeoftheplastidialisoprenoidpathwaytoproteinqualitycontrolPlantCell2013254183mdash4194
[72]PrasannaVPrabhaTNTharanathanRNFruitripeningphenomenamdashAnoverviewCriticalReviewsinFoodScienceandNutrition
2007471mdash19[73]FujisawaMShimaYHiguchiNetalDirecttargetsofthetomatoGripeningregulatorRINidentifiedbytranscriptomeandchromatin
immunoprecipitationanalysesPlanta20122351107mdash1122[74]KarlovaRRosinFMBusscherGLangeJetalTranscriptomeandmetaboliteprofilingshowthatAPETALA2aisamajorregulatorof
tomatofruitripeningPlantCell201123923mdash941[75]LeeJMJoungJGMcQuinnRetalCombinedtranscriptomegeneticdiversityandmetaboliteprofilingintomatofruitrevealsthatthe
ethyleneresponsefactorSlERF6playsanimportantroleinripeningandcarotenoidaccumulationPlantJournal201270191mdash204[76]ShimaYFujisawaMKitagawaMetalTomatoFRUITFULLhomologsregulatefruitripeningviaethylenebiosynthesisBioscience
BiotechnologyandBiochemistry201478231mdash237[77]VrebalovJPanILArroyoAJMetalFleshyfruitexpansionandripeningareregulatedbythetomatoSHATTERPROOFgene
TAGL1PlantCell2009213041mdash3062[78]WangSLuGHouZetalMembersofthetomatoFRUITFULL MADSGboxfamilyregulatestyleabscissionandfruitripening
JournalofExperimentalBotany2014653005mdash3014[79]HagenGAuxinsignaltransductionEssaysinBiochemistry2015581mdash12[80]PanLZengWNiuLetalPpYUC11astrongcandidategeneforthestonyhardphenotypeinpeach(PrunuspersicaLBatsch)
participatesinIAAbiosynthesisduringfruitripeningJournalofExperimentalBotany2015667031mdash7044[81]BoettcherCKeyzersRABossPKetalSequestrationofauxinbytheindoleG3GaceticacidGamidosynthetaseGH3G1ingrapeberry(Vitis
viniferaL)andtheproposedroleofauxinconjugationduringripeningJournalofExperimentalBotany2010613615mdash3625[82]SuLDirettoGPurgattoEetalCarotenoidaccumulationduringtomatofruitripeningismodulatedbytheauxinGethylenebalance
BMCPlantBiology201515[83]WengLZhaoFLiRetalThezincfingertranscriptionfactorSlZFP2negativelyregulatesabscisicacidbiosynthesisandfruitripening
intomatoPlantPhysiology2015167931mdash949[84]JiaHFChaiYMLiCLetalAbscisicacidplaysanimportantroleintheregulationofstrawberryfruitripeningPlantPhysiology
2011157188mdash199[85]CreelmanRAMulletJEBiosynthesisandactionofjasmonatesinplantsAnnualReviewofPlantPhysiologyandPlantMolecular
Biology199748355mdash381[86]LiTXuYZhangLetalThejasmonateGactivatedtranscriptionfactorMdMYC2regulatesETHYLENERESPONSEFACTORand
ethylenebiosyntheticgenestopromoteethylenebiosynthesisduringapplefruitripeningPlantCell2017291316mdash1334[87]RudellDRMattheisJPFanXetalMethyljasmonateenhancesanthocyaninaccumulationandmodifiesproductionofphenolicsand
pigmentsinlsquoFujirsquoapplesJournaloftheAmericanSocietyforHorticulturalScience2002127435mdash441[88]LiuLWeiJZhang MetalEthyleneindependentinductionoflycopenebiosynthesisintomatofruitsbyjasmonatesJournalof
ExperimentalBotany2012635751mdash5761
DuanXuewu
ProfDuanXuewureceivedhisPhDdegreefromtheGraduateSchoolof
ChineseAcademyofSciencesin2004Heiscurrentlyaprofessorof
South China Botanical GardenChinese Academy ofSciencesHis
researchinterestsincludebiochemistryandmolecularbiologyinrelation
to ripeningsenescence and deterioration of postharvestfruits and
vegetablesespeciallytranscriptionalregulationandposttranscriptional
modificationanddevelopmentofstorageandhandlingtechniquesin
subtropicalandtropicalfruitHewasthePrincipalInvestigatorofmore
than20projectsfromthegovernmentUptonowhehaspublishedmorethan90papersandhasbeen
patented29inventionpatentsincludinganUSApatent
bullReviewsbull
SCIENCEFOUNDATIONINCHINA Vol26No12018 63
relatedstudieshavebeenmostlyfocusedonmodelspeciessuchasArabidopsisandtomatoThemolecularmechanismsunderlyingcarotenoid metabolism andregulationin otherfruitspeciesarestillpoorlyunderstoodConsideringthediversityofcarotenoidsinfruitsitisnecessarytoinvestigatethenovelgenesandregulationmechanismsrelatedtocarotenoidbiosynthesisinplants
Carotenoid accumulation is cooperatively controlled at multiple levelsincluding developmentalprogramsenvironmentalfactorsand metabolicsignalsTranscriptionfactorsplayimportantroleinregulatingcarotenoidbiosynthesisHoweveronlyafewtranscriptionfactorsinvolvedincarotenoidbiosynthesisareidentifiedandtranscriptionregulationismainlyrelatedtoexpressionofPSYMoreovermostofthesetranscriptionfactorsexerttheirinfluencesviaregulatingfruitripeningnotspecificcarotenoidbiosynthesisGrelated genesTheinteracting partners oftranscriptionfactorsinvolvedincarotenoidmetabolicnetworkalsoremaintobeidentifiedPostGtranscriptionalregulationalternativeRNAsplicingepigeneticmodificationandmiRNAareofimportanceinplantgrowthanddevelopmentandresponsetoabioticstressHoweverlittleinformationregardingtheinvolvementofthesemechanismsinregulating carotenoid metabolism in planteven in Arabidopsisis available Application ofphytohormonescontributestoregulatecarotenoidcontentand maintainfruitqualityinagricultureandpostharvesttreatmentThemechanismunderlyingregulationofcarotenoidmetabolismbyphytohormonesespeciallycrossGtalkamongdifferentphytohormonesarestillfarfrombeingunderstoodInthefuturestudiesbetterunderstandingofcarotenoid metabolismandregulationinfruitswillnotonlyhaveanimportantimpactongeneticimprovementandpostharvesttreatmentbutalsowillstrengthenknowledgeofcarotenoidregulationinplants
Acknowledgements
ThisworkwassupportedbytheNationalNaturalScienceFoundationofChina(GrantNos3177204131322044and31501545)ScienceandTechnologyPlanningProjectofGuangdongProvince(GrantNo2015B090901058)ScienceandTechnologyPlanningProjectofGuangzhou (GrantNo201604020048)andTalentProgramofGuangdongProvince(No2014TX01N049)
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64 Vol26No12018 SCIENCEFOUNDATIONINCHINA
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(Momordicacharantia)FoodChemistry20111261686mdash1692[23]SchweiggertRMSteingassCBHellerAetalCharacterizationofchromoplastsandcarotenoidsofredGandyellowGfleshedpapaya
(CaricapapayaL)Planta20112341031mdash1044[24]AbushitaAADaoodHGBiacsPAChangeincarotenoidsandantioxidantvitaminsintomatoasafunctionofvarietalandtechnological
factorsJournalofAgriculturalandFoodChemistry2000482075mdash2081[25]LvPLiNLiuHetalChangesincarotenoidprofilesandintheexpressionpatternofthegenesincarotenoidmetabolismsduringfruit
developmentandripeninginfourwatermeloncultivarsFoodChemistry201517452mdash59[26]Liu CZhang HDaiZetalVolatilechemicalandcarotenoidprofilesin watermelonsCitrullusvulgaris (Thunb)Schrad
(Cucurbitaceae)withdifferentfleshcolorsFoodScienceandBiotechnology201221531mdash541[27]AlquezarBRodrigoMJLadoJetalAcomparativephysiologicalandtranscriptionalstudyofcarotenoidbiosynthesisinwhiteandred
grapefruit(CitrusparadisiMacf)TreeGeneticsamp Genomes201391257mdash1269[28]KatoMMechanismofcarotenoidaccumulationincitrusfruitJournaloftheJapaneseSocietyforHorticulturalScience201281219mdash
233[29]IsaacsonTRonenGZamirDetalCloningoftangerinefromtomatorevealsacarotenoidisomeraseessentialfortheproductionofbetaG
caroteneandxanthophyllsinplantsPlantCell200214333mdash342[30]RonenGCohenMZamirDetalRegulationofcarotenoidbiosynthesisduringtomatofruitdevelopmentExpressionofthegenefor
lycopeneepsilonGcyclaseisdownGregulatedduringripeningandiselevatedinthemutantDeltaPlantJournal199917341mdash351[31]RonenGCarmelGGorenLZamirDetalAnalternativepathwaytobetaGcaroteneformationinplantchromoplastsdiscoveredbymapG
basedcloningofBetaandoldGgoldcolormutationsintomatoProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica20009711102mdash11107
[32]HorneroGMendezDdeGuevaraRGLMinguezGMosqueraMICarotenoidbiosynthesischangesinfiveredpepper(CapsicumannuumL)
cultivarsduringripeningCultivarselectionforbreedingJournalofAgriculturalandFoodChemistry2000483857mdash3864[33]GuzmanIHambySRomeroJetalVariabilityofcarotenoidbiosynthesisinorangecoloredCapsicumsppPlantScience2010179
49mdash59[34]RodriguezGUribeLGuzmanIRajapakseWetalCarotenoidaccumulationinorangeGpigmentedCapsicumannuumfruitregulatedat
multiplelevelsJournalofExperimentalBotany201263517mdash526[35]SunTYuanHCaoHetalCarotenoidmetabolisminplantstheroleofplastidsMolecularPlant20181158mdash74[36]BramleyPMRegulationofcarotenoidformationduringtomatofruitripeninganddevelopmentJournalofExperimentalBotany2002
532107mdash2113[37]EstevezJMCanteroAReindlAetal1GdeoxyGDGxyluloseG5Gphosphatesynthasealimitingenzymeforplastidicisoprenoidbiosynthesis
inplantsJournalofBiologicalChemistry200127622901mdash22909[38]BotellaGPaviaPBesumbes OPhillips MAetalRegulationofcarotenoidbiosynthesisinplantsevidenceforakeyroleof
hydroxymethylbutenyldiphosphatereductaseincontrollingthesupplyofplastidialisoprenoidprecursorsPlantJournal200440188mdash
199[39]CazzonelliCIPogsonBJSourcetosinkregulationofcarotenoidbiosynthesisinplantsTrendsinPlantScience201015266mdash274[40]FraserPDEnfissiEMAHalketJMetalManipulationofphytoenelevelsintomatofruiteffectsonisoprenoidsplastidsand
intermediarymetabolismPlantCell2007193194mdash3211[41]FraserPDRomerSKianoJWetalElevationofcarotenoidsintomatobygeneticmanipulationJournaloftheScienceofFoodand
Agriculture200181822mdash827[42]RayJMoureauPBirdCetalCloningandcharacterizaitonofageneinvolvedinphytoenesynthesisfromtomatoPlantMolecular
Biology199219401mdash404
bullReviewsbull
SCIENCEFOUNDATIONINCHINA Vol26No12018 65
[43]PengGWangCSongSetalTheroleof1GdeoxyGDGxyluloseG5GphosphatesynthaseandphytoenesynthasegenefamilyincitruscarotenoidaccumulationPlantPhysiologyandBiochemistry20137167mdash76
[44]ZhaoDZhouCTaoJCarotenoidaccumulationandcarotenogenicgenesexpressionduringtwotypesofpersimmonfruit(DiospyroskakiL)developmentPlantMolecularBiologyReporter201129646mdash654
[45]MlalaziBWelschRNamanyaPetalIsolationandfunctionalcharacterisationofbananaphytoenesynthasegenesaspotentialcisgenesPlanta20122361585mdash1598
[46]NeumanHGalpazNCunningham FXetalThetomatomutationnxd1revealsagenenecessaryforneoxanthinbiosynthesisanddemonstratesthatviolaxanthinisasufficientprecursorforabscisicacidbiosynthesisPlantJournal20147880mdash93
[47]VrebalovJRuezinskyDPadmanabhanVetalA MADSGboxgenenecessaryforfruitripeningatthetomatoripeningGinhibitor(Rin)
locusScience2002296343mdash346[48]MartelCVrebalovJTafelmeyerPetalThetomato MADSGBoxtranscriptionfactorRIPENINGINHIBITORinteractswith
promotersinvolvedinnumerousripeningprocessesinaCOLORLESSNONRIPENINGGdependentmannerPlantPhysiology2011157
1568mdash1579[49]Fujisawa MNakanoTShimaYetalAlargeGscaleidentificationofdirecttargetsofthetomato MADSBoxtranscriptionfactor
RIPENINGINHIBITORrevealstheregulationoffruitripeningPlantCell201325371mdash386[50]DubosCStrackeRGrotewoldEetalMYBtranscriptionfactorsinArabidopsisTrendsinPlantScience201015573mdash581[51]ZhuFLuoTLiuCetalAnR2R3GMYBtranscriptionfactorrepressesthetransformationofalphaGandbetaGbranchcarotenoidsby
negativelyregulatingexpressionofCrBCH2andCrNCED5inflavedoofCitrusreticulateNewPhytologist2017216178mdash192[52]SagawaJMStanleyLELaFountainAMetalAnR2R3GMYBtranscriptionfactorregulatescarotenoidpigmentationinMimuluslewisii
flowersNewPhytologist20162091049mdash1057[53]JaakolaLNewinsightsintotheregulationofanthocyaninbiosynthesisinfruitsTrendsinPlantScience201318477mdash482[54]JiangGYanHWuFetalLitchifruitLcNAC1isatargetofLcMYC2andregulatoroffruitsenescencethroughitsinteractionwith
LcWRKY1PlantandCellPhysiology2017581075mdash1089[55]MengCYangDMaXetalSuppressionoftomatoSlNAC1transcriptionfactordelaysfruitripeningJournalofPlantPhysiology
201619388mdash96[56]ShanWKuangJFChenLetalMolecularcharacterizationofbananaNACtranscriptionfactorsandtheirinteractionswithethylene
signallingcomponentEILduringfruitripeningJournalofExperimentalBotany2012635171mdash5187[57]ZhuMChenGZhouSetalAnewtomatoNAC (NAMATAF12CUC2)transcriptionfactorSlNAC4functionsasapositive
regulatoroffruitripeningandcarotenoidaccumulationPlantandCellPhysiology201455119mdash135[58]FuCCHanYCKuangJFetalPapayaCpEIN3aandCpNAC2cooperativelyregulatecarotenoidbiosynthesisrelatedgenesCpPDS2
4CpLCYGeandCpCHYGbduringfruitripeningPlantandCellPhysiology2017582155mdash2165[59]LuoZZhangJLiJetalASTAYGGREENproteinSlSGR1regulateslycopeneandbetaGcaroteneaccumulationbyinteractingdirectly
withSlPSY1duringripeningprocessesintomatoNewPhytologist2013198442mdash452[60]ToledoGOrtizGHuqERodriguezGConcepcionMDirectregulationofphytoenesynthasegeneexpressionandcarotenoidbiosynthesisby
phytochromeGinteractingfactorsProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica201010711626mdash
11631[61]WelschRMaassDVoegelTetalTranscriptionfactorRAP22anditsinteractingpartnerSINAT2Stableelementsinthe
carotenogenesisofArabidopsisleavesPlantPhysiology20071451073mdash1085[62]EndoTFujiiHSugiyamaAetalOverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor (CubHLH1)whichis
homologoustoArabidopsisactivationGtaggedbri1suppressor1interactingfactorgenesmodulatescarotenoidmetabolismintransgenictomatoPlantScience201624335mdash48
[63]LiuLJiaCZhang MetalEctopicexpressionofaBZR1G1DtranscriptionfactorinbrassinosteroidsignallingenhancescarotenoidaccumulationandfruitqualityattributesintomatoPlantBiotechnologyJournal201412105mdash115
[64]CazzonelliCICuttrissAJCossettoSBetalRegulationofcarotenoidcompositionandshootbranchinginarabidopsisbyachromatinmodifyinghistonemethyltransferaseSDG8PlantCell20092139mdash53
[65]AlvarezDVossBMaassDetalCarotenogenesisisregulatedby51049011UTRGmediatedtranslationofphytoenesynthasesplicevariantsPlantPhysiology20161722314mdash2326
[66]KaurSSpillaneCReductionincarotenoidlevelsinthemarinediatomPhaeodactylumtricornutum byartificialmicroRNAstargetedagainsttheendogenousphytoenesynthasegeneMarineBiotechnology2015171mdash7
[67]BaiCRiveraSMMedinaVetalAninvitrosystemfortherapidfunctionalcharacterizationofgenesinvolvedincarotenoidbiosynthesisandaccumulationPlantJournal201477464mdash475
[68]KimSHAhnYOAhnMJetalCloningandcharacterizationofanOrangegenethatincreasescarotenoidaccumulationandsaltstresstoleranceintransgenicsweetpotatoculturesPlantPhysiologyandBiochemistry201370445mdash454
[69]ZhouXWelschRYang YetalArabidopsisORproteinsarethemajorposttranscriptionalregulatorsofphytoenesynthaseincontrollingcarotenoidbiosynthesisProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica20151123558mdash
3563[70]WelschRZhouXYuanHetalClpproteaseandORdirectlycontroltheproteostasisofphytoenesynthasethecrucialenzymefor
carotenoidbiosynthesisinArabidopsisMolecularPlant201811149mdash162
bullReviewsbull
66 Vol26No12018 SCIENCEFOUNDATIONINCHINA
[71]PulidoPToledoGOrtizGPhillipsMAetalArabidopsisJGProteinJ20deliversthefirstenzymeoftheplastidialisoprenoidpathwaytoproteinqualitycontrolPlantCell2013254183mdash4194
[72]PrasannaVPrabhaTNTharanathanRNFruitripeningphenomenamdashAnoverviewCriticalReviewsinFoodScienceandNutrition
2007471mdash19[73]FujisawaMShimaYHiguchiNetalDirecttargetsofthetomatoGripeningregulatorRINidentifiedbytranscriptomeandchromatin
immunoprecipitationanalysesPlanta20122351107mdash1122[74]KarlovaRRosinFMBusscherGLangeJetalTranscriptomeandmetaboliteprofilingshowthatAPETALA2aisamajorregulatorof
tomatofruitripeningPlantCell201123923mdash941[75]LeeJMJoungJGMcQuinnRetalCombinedtranscriptomegeneticdiversityandmetaboliteprofilingintomatofruitrevealsthatthe
ethyleneresponsefactorSlERF6playsanimportantroleinripeningandcarotenoidaccumulationPlantJournal201270191mdash204[76]ShimaYFujisawaMKitagawaMetalTomatoFRUITFULLhomologsregulatefruitripeningviaethylenebiosynthesisBioscience
BiotechnologyandBiochemistry201478231mdash237[77]VrebalovJPanILArroyoAJMetalFleshyfruitexpansionandripeningareregulatedbythetomatoSHATTERPROOFgene
TAGL1PlantCell2009213041mdash3062[78]WangSLuGHouZetalMembersofthetomatoFRUITFULL MADSGboxfamilyregulatestyleabscissionandfruitripening
JournalofExperimentalBotany2014653005mdash3014[79]HagenGAuxinsignaltransductionEssaysinBiochemistry2015581mdash12[80]PanLZengWNiuLetalPpYUC11astrongcandidategeneforthestonyhardphenotypeinpeach(PrunuspersicaLBatsch)
participatesinIAAbiosynthesisduringfruitripeningJournalofExperimentalBotany2015667031mdash7044[81]BoettcherCKeyzersRABossPKetalSequestrationofauxinbytheindoleG3GaceticacidGamidosynthetaseGH3G1ingrapeberry(Vitis
viniferaL)andtheproposedroleofauxinconjugationduringripeningJournalofExperimentalBotany2010613615mdash3625[82]SuLDirettoGPurgattoEetalCarotenoidaccumulationduringtomatofruitripeningismodulatedbytheauxinGethylenebalance
BMCPlantBiology201515[83]WengLZhaoFLiRetalThezincfingertranscriptionfactorSlZFP2negativelyregulatesabscisicacidbiosynthesisandfruitripening
intomatoPlantPhysiology2015167931mdash949[84]JiaHFChaiYMLiCLetalAbscisicacidplaysanimportantroleintheregulationofstrawberryfruitripeningPlantPhysiology
2011157188mdash199[85]CreelmanRAMulletJEBiosynthesisandactionofjasmonatesinplantsAnnualReviewofPlantPhysiologyandPlantMolecular
Biology199748355mdash381[86]LiTXuYZhangLetalThejasmonateGactivatedtranscriptionfactorMdMYC2regulatesETHYLENERESPONSEFACTORand
ethylenebiosyntheticgenestopromoteethylenebiosynthesisduringapplefruitripeningPlantCell2017291316mdash1334[87]RudellDRMattheisJPFanXetalMethyljasmonateenhancesanthocyaninaccumulationandmodifiesproductionofphenolicsand
pigmentsinlsquoFujirsquoapplesJournaloftheAmericanSocietyforHorticulturalScience2002127435mdash441[88]LiuLWeiJZhang MetalEthyleneindependentinductionoflycopenebiosynthesisintomatofruitsbyjasmonatesJournalof
ExperimentalBotany2012635751mdash5761
DuanXuewu
ProfDuanXuewureceivedhisPhDdegreefromtheGraduateSchoolof
ChineseAcademyofSciencesin2004Heiscurrentlyaprofessorof
South China Botanical GardenChinese Academy ofSciencesHis
researchinterestsincludebiochemistryandmolecularbiologyinrelation
to ripeningsenescence and deterioration of postharvestfruits and
vegetablesespeciallytranscriptionalregulationandposttranscriptional
modificationanddevelopmentofstorageandhandlingtechniquesin
subtropicalandtropicalfruitHewasthePrincipalInvestigatorofmore
than20projectsfromthegovernmentUptonowhehaspublishedmorethan90papersandhasbeen
patented29inventionpatentsincludinganUSApatent
bullReviewsbull
64 Vol26No12018 SCIENCEFOUNDATIONINCHINA
[14]SinghBSinghJPKaurAetalBioactivecompoundsinbananaandtheirassociatedhealthbenefitsmdashAreviewFoodChemistry2016
2061mdash11[15]AubertCChalotGChemicalcompositionbioactivecompoundsandvolatilesofsixtablegrapevarieties(Vitisvinifera L)Food
Chemistry2018240524mdash533[16]ZhengHZhangQQuanJetalDeterminationofsugarsorganicacidsaromacomponentsandcarotenoidsingrapefruitpulpsFood
Chemistry2016205112mdash121[17]FanciullinoALDhuiqueGMayerCLuroFetalCarotenoiddiversityincultivatedcitrusishighlyinfluencedbygeneticfactorsJournal
ofAgriculturalandFoodChemistry2006544397mdash4406[18]KatoMIkomaYMatsumotoHetalAccumulationofcarotenoidsandexpressionofcarotenoidbiosyntheticgenesduringmaturation
incitrusfruitPlantPhysiology2004134824mdash837[19]LuPJWangCYYinTTetalCytologicalandmolecularcharacterizationofcarotenoidaccumulationinnormalandhighGlycopene
mutantorangesScientificReports20177[20]AmpomahGDwamenaCMcGhieTWibisono RetalThekiwifruitlycopenebetaGcyclaseplaysasignificantroleincarotenoid
accumulationinfruitJournalofExperimentalBotany2009603765mdash3779[21]AjilaCMRaoLJRaoUJSPCharacterizationofbioactivecompoundsfromrawandripeMangiferaindicaLpeelextractsFoodand
ChemicalToxicology2010483406mdash3411[22]TuanPAKimJKParkNIetalCarotenoidcontentandexpressionofphytoenesynthaseandphytoenedesaturasegenesinbittermelon
(Momordicacharantia)FoodChemistry20111261686mdash1692[23]SchweiggertRMSteingassCBHellerAetalCharacterizationofchromoplastsandcarotenoidsofredGandyellowGfleshedpapaya
(CaricapapayaL)Planta20112341031mdash1044[24]AbushitaAADaoodHGBiacsPAChangeincarotenoidsandantioxidantvitaminsintomatoasafunctionofvarietalandtechnological
factorsJournalofAgriculturalandFoodChemistry2000482075mdash2081[25]LvPLiNLiuHetalChangesincarotenoidprofilesandintheexpressionpatternofthegenesincarotenoidmetabolismsduringfruit
developmentandripeninginfourwatermeloncultivarsFoodChemistry201517452mdash59[26]Liu CZhang HDaiZetalVolatilechemicalandcarotenoidprofilesin watermelonsCitrullusvulgaris (Thunb)Schrad
(Cucurbitaceae)withdifferentfleshcolorsFoodScienceandBiotechnology201221531mdash541[27]AlquezarBRodrigoMJLadoJetalAcomparativephysiologicalandtranscriptionalstudyofcarotenoidbiosynthesisinwhiteandred
grapefruit(CitrusparadisiMacf)TreeGeneticsamp Genomes201391257mdash1269[28]KatoMMechanismofcarotenoidaccumulationincitrusfruitJournaloftheJapaneseSocietyforHorticulturalScience201281219mdash
233[29]IsaacsonTRonenGZamirDetalCloningoftangerinefromtomatorevealsacarotenoidisomeraseessentialfortheproductionofbetaG
caroteneandxanthophyllsinplantsPlantCell200214333mdash342[30]RonenGCohenMZamirDetalRegulationofcarotenoidbiosynthesisduringtomatofruitdevelopmentExpressionofthegenefor
lycopeneepsilonGcyclaseisdownGregulatedduringripeningandiselevatedinthemutantDeltaPlantJournal199917341mdash351[31]RonenGCarmelGGorenLZamirDetalAnalternativepathwaytobetaGcaroteneformationinplantchromoplastsdiscoveredbymapG
basedcloningofBetaandoldGgoldcolormutationsintomatoProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica20009711102mdash11107
[32]HorneroGMendezDdeGuevaraRGLMinguezGMosqueraMICarotenoidbiosynthesischangesinfiveredpepper(CapsicumannuumL)
cultivarsduringripeningCultivarselectionforbreedingJournalofAgriculturalandFoodChemistry2000483857mdash3864[33]GuzmanIHambySRomeroJetalVariabilityofcarotenoidbiosynthesisinorangecoloredCapsicumsppPlantScience2010179
49mdash59[34]RodriguezGUribeLGuzmanIRajapakseWetalCarotenoidaccumulationinorangeGpigmentedCapsicumannuumfruitregulatedat
multiplelevelsJournalofExperimentalBotany201263517mdash526[35]SunTYuanHCaoHetalCarotenoidmetabolisminplantstheroleofplastidsMolecularPlant20181158mdash74[36]BramleyPMRegulationofcarotenoidformationduringtomatofruitripeninganddevelopmentJournalofExperimentalBotany2002
532107mdash2113[37]EstevezJMCanteroAReindlAetal1GdeoxyGDGxyluloseG5Gphosphatesynthasealimitingenzymeforplastidicisoprenoidbiosynthesis
inplantsJournalofBiologicalChemistry200127622901mdash22909[38]BotellaGPaviaPBesumbes OPhillips MAetalRegulationofcarotenoidbiosynthesisinplantsevidenceforakeyroleof
hydroxymethylbutenyldiphosphatereductaseincontrollingthesupplyofplastidialisoprenoidprecursorsPlantJournal200440188mdash
199[39]CazzonelliCIPogsonBJSourcetosinkregulationofcarotenoidbiosynthesisinplantsTrendsinPlantScience201015266mdash274[40]FraserPDEnfissiEMAHalketJMetalManipulationofphytoenelevelsintomatofruiteffectsonisoprenoidsplastidsand
intermediarymetabolismPlantCell2007193194mdash3211[41]FraserPDRomerSKianoJWetalElevationofcarotenoidsintomatobygeneticmanipulationJournaloftheScienceofFoodand
Agriculture200181822mdash827[42]RayJMoureauPBirdCetalCloningandcharacterizaitonofageneinvolvedinphytoenesynthesisfromtomatoPlantMolecular
Biology199219401mdash404
bullReviewsbull
SCIENCEFOUNDATIONINCHINA Vol26No12018 65
[43]PengGWangCSongSetalTheroleof1GdeoxyGDGxyluloseG5GphosphatesynthaseandphytoenesynthasegenefamilyincitruscarotenoidaccumulationPlantPhysiologyandBiochemistry20137167mdash76
[44]ZhaoDZhouCTaoJCarotenoidaccumulationandcarotenogenicgenesexpressionduringtwotypesofpersimmonfruit(DiospyroskakiL)developmentPlantMolecularBiologyReporter201129646mdash654
[45]MlalaziBWelschRNamanyaPetalIsolationandfunctionalcharacterisationofbananaphytoenesynthasegenesaspotentialcisgenesPlanta20122361585mdash1598
[46]NeumanHGalpazNCunningham FXetalThetomatomutationnxd1revealsagenenecessaryforneoxanthinbiosynthesisanddemonstratesthatviolaxanthinisasufficientprecursorforabscisicacidbiosynthesisPlantJournal20147880mdash93
[47]VrebalovJRuezinskyDPadmanabhanVetalA MADSGboxgenenecessaryforfruitripeningatthetomatoripeningGinhibitor(Rin)
locusScience2002296343mdash346[48]MartelCVrebalovJTafelmeyerPetalThetomato MADSGBoxtranscriptionfactorRIPENINGINHIBITORinteractswith
promotersinvolvedinnumerousripeningprocessesinaCOLORLESSNONRIPENINGGdependentmannerPlantPhysiology2011157
1568mdash1579[49]Fujisawa MNakanoTShimaYetalAlargeGscaleidentificationofdirecttargetsofthetomato MADSBoxtranscriptionfactor
RIPENINGINHIBITORrevealstheregulationoffruitripeningPlantCell201325371mdash386[50]DubosCStrackeRGrotewoldEetalMYBtranscriptionfactorsinArabidopsisTrendsinPlantScience201015573mdash581[51]ZhuFLuoTLiuCetalAnR2R3GMYBtranscriptionfactorrepressesthetransformationofalphaGandbetaGbranchcarotenoidsby
negativelyregulatingexpressionofCrBCH2andCrNCED5inflavedoofCitrusreticulateNewPhytologist2017216178mdash192[52]SagawaJMStanleyLELaFountainAMetalAnR2R3GMYBtranscriptionfactorregulatescarotenoidpigmentationinMimuluslewisii
flowersNewPhytologist20162091049mdash1057[53]JaakolaLNewinsightsintotheregulationofanthocyaninbiosynthesisinfruitsTrendsinPlantScience201318477mdash482[54]JiangGYanHWuFetalLitchifruitLcNAC1isatargetofLcMYC2andregulatoroffruitsenescencethroughitsinteractionwith
LcWRKY1PlantandCellPhysiology2017581075mdash1089[55]MengCYangDMaXetalSuppressionoftomatoSlNAC1transcriptionfactordelaysfruitripeningJournalofPlantPhysiology
201619388mdash96[56]ShanWKuangJFChenLetalMolecularcharacterizationofbananaNACtranscriptionfactorsandtheirinteractionswithethylene
signallingcomponentEILduringfruitripeningJournalofExperimentalBotany2012635171mdash5187[57]ZhuMChenGZhouSetalAnewtomatoNAC (NAMATAF12CUC2)transcriptionfactorSlNAC4functionsasapositive
regulatoroffruitripeningandcarotenoidaccumulationPlantandCellPhysiology201455119mdash135[58]FuCCHanYCKuangJFetalPapayaCpEIN3aandCpNAC2cooperativelyregulatecarotenoidbiosynthesisrelatedgenesCpPDS2
4CpLCYGeandCpCHYGbduringfruitripeningPlantandCellPhysiology2017582155mdash2165[59]LuoZZhangJLiJetalASTAYGGREENproteinSlSGR1regulateslycopeneandbetaGcaroteneaccumulationbyinteractingdirectly
withSlPSY1duringripeningprocessesintomatoNewPhytologist2013198442mdash452[60]ToledoGOrtizGHuqERodriguezGConcepcionMDirectregulationofphytoenesynthasegeneexpressionandcarotenoidbiosynthesisby
phytochromeGinteractingfactorsProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica201010711626mdash
11631[61]WelschRMaassDVoegelTetalTranscriptionfactorRAP22anditsinteractingpartnerSINAT2Stableelementsinthe
carotenogenesisofArabidopsisleavesPlantPhysiology20071451073mdash1085[62]EndoTFujiiHSugiyamaAetalOverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor (CubHLH1)whichis
homologoustoArabidopsisactivationGtaggedbri1suppressor1interactingfactorgenesmodulatescarotenoidmetabolismintransgenictomatoPlantScience201624335mdash48
[63]LiuLJiaCZhang MetalEctopicexpressionofaBZR1G1DtranscriptionfactorinbrassinosteroidsignallingenhancescarotenoidaccumulationandfruitqualityattributesintomatoPlantBiotechnologyJournal201412105mdash115
[64]CazzonelliCICuttrissAJCossettoSBetalRegulationofcarotenoidcompositionandshootbranchinginarabidopsisbyachromatinmodifyinghistonemethyltransferaseSDG8PlantCell20092139mdash53
[65]AlvarezDVossBMaassDetalCarotenogenesisisregulatedby51049011UTRGmediatedtranslationofphytoenesynthasesplicevariantsPlantPhysiology20161722314mdash2326
[66]KaurSSpillaneCReductionincarotenoidlevelsinthemarinediatomPhaeodactylumtricornutum byartificialmicroRNAstargetedagainsttheendogenousphytoenesynthasegeneMarineBiotechnology2015171mdash7
[67]BaiCRiveraSMMedinaVetalAninvitrosystemfortherapidfunctionalcharacterizationofgenesinvolvedincarotenoidbiosynthesisandaccumulationPlantJournal201477464mdash475
[68]KimSHAhnYOAhnMJetalCloningandcharacterizationofanOrangegenethatincreasescarotenoidaccumulationandsaltstresstoleranceintransgenicsweetpotatoculturesPlantPhysiologyandBiochemistry201370445mdash454
[69]ZhouXWelschRYang YetalArabidopsisORproteinsarethemajorposttranscriptionalregulatorsofphytoenesynthaseincontrollingcarotenoidbiosynthesisProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica20151123558mdash
3563[70]WelschRZhouXYuanHetalClpproteaseandORdirectlycontroltheproteostasisofphytoenesynthasethecrucialenzymefor
carotenoidbiosynthesisinArabidopsisMolecularPlant201811149mdash162
bullReviewsbull
66 Vol26No12018 SCIENCEFOUNDATIONINCHINA
[71]PulidoPToledoGOrtizGPhillipsMAetalArabidopsisJGProteinJ20deliversthefirstenzymeoftheplastidialisoprenoidpathwaytoproteinqualitycontrolPlantCell2013254183mdash4194
[72]PrasannaVPrabhaTNTharanathanRNFruitripeningphenomenamdashAnoverviewCriticalReviewsinFoodScienceandNutrition
2007471mdash19[73]FujisawaMShimaYHiguchiNetalDirecttargetsofthetomatoGripeningregulatorRINidentifiedbytranscriptomeandchromatin
immunoprecipitationanalysesPlanta20122351107mdash1122[74]KarlovaRRosinFMBusscherGLangeJetalTranscriptomeandmetaboliteprofilingshowthatAPETALA2aisamajorregulatorof
tomatofruitripeningPlantCell201123923mdash941[75]LeeJMJoungJGMcQuinnRetalCombinedtranscriptomegeneticdiversityandmetaboliteprofilingintomatofruitrevealsthatthe
ethyleneresponsefactorSlERF6playsanimportantroleinripeningandcarotenoidaccumulationPlantJournal201270191mdash204[76]ShimaYFujisawaMKitagawaMetalTomatoFRUITFULLhomologsregulatefruitripeningviaethylenebiosynthesisBioscience
BiotechnologyandBiochemistry201478231mdash237[77]VrebalovJPanILArroyoAJMetalFleshyfruitexpansionandripeningareregulatedbythetomatoSHATTERPROOFgene
TAGL1PlantCell2009213041mdash3062[78]WangSLuGHouZetalMembersofthetomatoFRUITFULL MADSGboxfamilyregulatestyleabscissionandfruitripening
JournalofExperimentalBotany2014653005mdash3014[79]HagenGAuxinsignaltransductionEssaysinBiochemistry2015581mdash12[80]PanLZengWNiuLetalPpYUC11astrongcandidategeneforthestonyhardphenotypeinpeach(PrunuspersicaLBatsch)
participatesinIAAbiosynthesisduringfruitripeningJournalofExperimentalBotany2015667031mdash7044[81]BoettcherCKeyzersRABossPKetalSequestrationofauxinbytheindoleG3GaceticacidGamidosynthetaseGH3G1ingrapeberry(Vitis
viniferaL)andtheproposedroleofauxinconjugationduringripeningJournalofExperimentalBotany2010613615mdash3625[82]SuLDirettoGPurgattoEetalCarotenoidaccumulationduringtomatofruitripeningismodulatedbytheauxinGethylenebalance
BMCPlantBiology201515[83]WengLZhaoFLiRetalThezincfingertranscriptionfactorSlZFP2negativelyregulatesabscisicacidbiosynthesisandfruitripening
intomatoPlantPhysiology2015167931mdash949[84]JiaHFChaiYMLiCLetalAbscisicacidplaysanimportantroleintheregulationofstrawberryfruitripeningPlantPhysiology
2011157188mdash199[85]CreelmanRAMulletJEBiosynthesisandactionofjasmonatesinplantsAnnualReviewofPlantPhysiologyandPlantMolecular
Biology199748355mdash381[86]LiTXuYZhangLetalThejasmonateGactivatedtranscriptionfactorMdMYC2regulatesETHYLENERESPONSEFACTORand
ethylenebiosyntheticgenestopromoteethylenebiosynthesisduringapplefruitripeningPlantCell2017291316mdash1334[87]RudellDRMattheisJPFanXetalMethyljasmonateenhancesanthocyaninaccumulationandmodifiesproductionofphenolicsand
pigmentsinlsquoFujirsquoapplesJournaloftheAmericanSocietyforHorticulturalScience2002127435mdash441[88]LiuLWeiJZhang MetalEthyleneindependentinductionoflycopenebiosynthesisintomatofruitsbyjasmonatesJournalof
ExperimentalBotany2012635751mdash5761
DuanXuewu
ProfDuanXuewureceivedhisPhDdegreefromtheGraduateSchoolof
ChineseAcademyofSciencesin2004Heiscurrentlyaprofessorof
South China Botanical GardenChinese Academy ofSciencesHis
researchinterestsincludebiochemistryandmolecularbiologyinrelation
to ripeningsenescence and deterioration of postharvestfruits and
vegetablesespeciallytranscriptionalregulationandposttranscriptional
modificationanddevelopmentofstorageandhandlingtechniquesin
subtropicalandtropicalfruitHewasthePrincipalInvestigatorofmore
than20projectsfromthegovernmentUptonowhehaspublishedmorethan90papersandhasbeen
patented29inventionpatentsincludinganUSApatent
bullReviewsbull
SCIENCEFOUNDATIONINCHINA Vol26No12018 65
[43]PengGWangCSongSetalTheroleof1GdeoxyGDGxyluloseG5GphosphatesynthaseandphytoenesynthasegenefamilyincitruscarotenoidaccumulationPlantPhysiologyandBiochemistry20137167mdash76
[44]ZhaoDZhouCTaoJCarotenoidaccumulationandcarotenogenicgenesexpressionduringtwotypesofpersimmonfruit(DiospyroskakiL)developmentPlantMolecularBiologyReporter201129646mdash654
[45]MlalaziBWelschRNamanyaPetalIsolationandfunctionalcharacterisationofbananaphytoenesynthasegenesaspotentialcisgenesPlanta20122361585mdash1598
[46]NeumanHGalpazNCunningham FXetalThetomatomutationnxd1revealsagenenecessaryforneoxanthinbiosynthesisanddemonstratesthatviolaxanthinisasufficientprecursorforabscisicacidbiosynthesisPlantJournal20147880mdash93
[47]VrebalovJRuezinskyDPadmanabhanVetalA MADSGboxgenenecessaryforfruitripeningatthetomatoripeningGinhibitor(Rin)
locusScience2002296343mdash346[48]MartelCVrebalovJTafelmeyerPetalThetomato MADSGBoxtranscriptionfactorRIPENINGINHIBITORinteractswith
promotersinvolvedinnumerousripeningprocessesinaCOLORLESSNONRIPENINGGdependentmannerPlantPhysiology2011157
1568mdash1579[49]Fujisawa MNakanoTShimaYetalAlargeGscaleidentificationofdirecttargetsofthetomato MADSBoxtranscriptionfactor
RIPENINGINHIBITORrevealstheregulationoffruitripeningPlantCell201325371mdash386[50]DubosCStrackeRGrotewoldEetalMYBtranscriptionfactorsinArabidopsisTrendsinPlantScience201015573mdash581[51]ZhuFLuoTLiuCetalAnR2R3GMYBtranscriptionfactorrepressesthetransformationofalphaGandbetaGbranchcarotenoidsby
negativelyregulatingexpressionofCrBCH2andCrNCED5inflavedoofCitrusreticulateNewPhytologist2017216178mdash192[52]SagawaJMStanleyLELaFountainAMetalAnR2R3GMYBtranscriptionfactorregulatescarotenoidpigmentationinMimuluslewisii
flowersNewPhytologist20162091049mdash1057[53]JaakolaLNewinsightsintotheregulationofanthocyaninbiosynthesisinfruitsTrendsinPlantScience201318477mdash482[54]JiangGYanHWuFetalLitchifruitLcNAC1isatargetofLcMYC2andregulatoroffruitsenescencethroughitsinteractionwith
LcWRKY1PlantandCellPhysiology2017581075mdash1089[55]MengCYangDMaXetalSuppressionoftomatoSlNAC1transcriptionfactordelaysfruitripeningJournalofPlantPhysiology
201619388mdash96[56]ShanWKuangJFChenLetalMolecularcharacterizationofbananaNACtranscriptionfactorsandtheirinteractionswithethylene
signallingcomponentEILduringfruitripeningJournalofExperimentalBotany2012635171mdash5187[57]ZhuMChenGZhouSetalAnewtomatoNAC (NAMATAF12CUC2)transcriptionfactorSlNAC4functionsasapositive
regulatoroffruitripeningandcarotenoidaccumulationPlantandCellPhysiology201455119mdash135[58]FuCCHanYCKuangJFetalPapayaCpEIN3aandCpNAC2cooperativelyregulatecarotenoidbiosynthesisrelatedgenesCpPDS2
4CpLCYGeandCpCHYGbduringfruitripeningPlantandCellPhysiology2017582155mdash2165[59]LuoZZhangJLiJetalASTAYGGREENproteinSlSGR1regulateslycopeneandbetaGcaroteneaccumulationbyinteractingdirectly
withSlPSY1duringripeningprocessesintomatoNewPhytologist2013198442mdash452[60]ToledoGOrtizGHuqERodriguezGConcepcionMDirectregulationofphytoenesynthasegeneexpressionandcarotenoidbiosynthesisby
phytochromeGinteractingfactorsProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica201010711626mdash
11631[61]WelschRMaassDVoegelTetalTranscriptionfactorRAP22anditsinteractingpartnerSINAT2Stableelementsinthe
carotenogenesisofArabidopsisleavesPlantPhysiology20071451073mdash1085[62]EndoTFujiiHSugiyamaAetalOverexpressionofacitrusbasichelixGloopGhelixtranscriptionfactor (CubHLH1)whichis
homologoustoArabidopsisactivationGtaggedbri1suppressor1interactingfactorgenesmodulatescarotenoidmetabolismintransgenictomatoPlantScience201624335mdash48
[63]LiuLJiaCZhang MetalEctopicexpressionofaBZR1G1DtranscriptionfactorinbrassinosteroidsignallingenhancescarotenoidaccumulationandfruitqualityattributesintomatoPlantBiotechnologyJournal201412105mdash115
[64]CazzonelliCICuttrissAJCossettoSBetalRegulationofcarotenoidcompositionandshootbranchinginarabidopsisbyachromatinmodifyinghistonemethyltransferaseSDG8PlantCell20092139mdash53
[65]AlvarezDVossBMaassDetalCarotenogenesisisregulatedby51049011UTRGmediatedtranslationofphytoenesynthasesplicevariantsPlantPhysiology20161722314mdash2326
[66]KaurSSpillaneCReductionincarotenoidlevelsinthemarinediatomPhaeodactylumtricornutum byartificialmicroRNAstargetedagainsttheendogenousphytoenesynthasegeneMarineBiotechnology2015171mdash7
[67]BaiCRiveraSMMedinaVetalAninvitrosystemfortherapidfunctionalcharacterizationofgenesinvolvedincarotenoidbiosynthesisandaccumulationPlantJournal201477464mdash475
[68]KimSHAhnYOAhnMJetalCloningandcharacterizationofanOrangegenethatincreasescarotenoidaccumulationandsaltstresstoleranceintransgenicsweetpotatoculturesPlantPhysiologyandBiochemistry201370445mdash454
[69]ZhouXWelschRYang YetalArabidopsisORproteinsarethemajorposttranscriptionalregulatorsofphytoenesynthaseincontrollingcarotenoidbiosynthesisProceedingsoftheNationalAcademyofSciencesoftheUnitedStatesofAmerica20151123558mdash
3563[70]WelschRZhouXYuanHetalClpproteaseandORdirectlycontroltheproteostasisofphytoenesynthasethecrucialenzymefor
carotenoidbiosynthesisinArabidopsisMolecularPlant201811149mdash162
bullReviewsbull
66 Vol26No12018 SCIENCEFOUNDATIONINCHINA
[71]PulidoPToledoGOrtizGPhillipsMAetalArabidopsisJGProteinJ20deliversthefirstenzymeoftheplastidialisoprenoidpathwaytoproteinqualitycontrolPlantCell2013254183mdash4194
[72]PrasannaVPrabhaTNTharanathanRNFruitripeningphenomenamdashAnoverviewCriticalReviewsinFoodScienceandNutrition
2007471mdash19[73]FujisawaMShimaYHiguchiNetalDirecttargetsofthetomatoGripeningregulatorRINidentifiedbytranscriptomeandchromatin
immunoprecipitationanalysesPlanta20122351107mdash1122[74]KarlovaRRosinFMBusscherGLangeJetalTranscriptomeandmetaboliteprofilingshowthatAPETALA2aisamajorregulatorof
tomatofruitripeningPlantCell201123923mdash941[75]LeeJMJoungJGMcQuinnRetalCombinedtranscriptomegeneticdiversityandmetaboliteprofilingintomatofruitrevealsthatthe
ethyleneresponsefactorSlERF6playsanimportantroleinripeningandcarotenoidaccumulationPlantJournal201270191mdash204[76]ShimaYFujisawaMKitagawaMetalTomatoFRUITFULLhomologsregulatefruitripeningviaethylenebiosynthesisBioscience
BiotechnologyandBiochemistry201478231mdash237[77]VrebalovJPanILArroyoAJMetalFleshyfruitexpansionandripeningareregulatedbythetomatoSHATTERPROOFgene
TAGL1PlantCell2009213041mdash3062[78]WangSLuGHouZetalMembersofthetomatoFRUITFULL MADSGboxfamilyregulatestyleabscissionandfruitripening
JournalofExperimentalBotany2014653005mdash3014[79]HagenGAuxinsignaltransductionEssaysinBiochemistry2015581mdash12[80]PanLZengWNiuLetalPpYUC11astrongcandidategeneforthestonyhardphenotypeinpeach(PrunuspersicaLBatsch)
participatesinIAAbiosynthesisduringfruitripeningJournalofExperimentalBotany2015667031mdash7044[81]BoettcherCKeyzersRABossPKetalSequestrationofauxinbytheindoleG3GaceticacidGamidosynthetaseGH3G1ingrapeberry(Vitis
viniferaL)andtheproposedroleofauxinconjugationduringripeningJournalofExperimentalBotany2010613615mdash3625[82]SuLDirettoGPurgattoEetalCarotenoidaccumulationduringtomatofruitripeningismodulatedbytheauxinGethylenebalance
BMCPlantBiology201515[83]WengLZhaoFLiRetalThezincfingertranscriptionfactorSlZFP2negativelyregulatesabscisicacidbiosynthesisandfruitripening
intomatoPlantPhysiology2015167931mdash949[84]JiaHFChaiYMLiCLetalAbscisicacidplaysanimportantroleintheregulationofstrawberryfruitripeningPlantPhysiology
2011157188mdash199[85]CreelmanRAMulletJEBiosynthesisandactionofjasmonatesinplantsAnnualReviewofPlantPhysiologyandPlantMolecular
Biology199748355mdash381[86]LiTXuYZhangLetalThejasmonateGactivatedtranscriptionfactorMdMYC2regulatesETHYLENERESPONSEFACTORand
ethylenebiosyntheticgenestopromoteethylenebiosynthesisduringapplefruitripeningPlantCell2017291316mdash1334[87]RudellDRMattheisJPFanXetalMethyljasmonateenhancesanthocyaninaccumulationandmodifiesproductionofphenolicsand
pigmentsinlsquoFujirsquoapplesJournaloftheAmericanSocietyforHorticulturalScience2002127435mdash441[88]LiuLWeiJZhang MetalEthyleneindependentinductionoflycopenebiosynthesisintomatofruitsbyjasmonatesJournalof
ExperimentalBotany2012635751mdash5761
DuanXuewu
ProfDuanXuewureceivedhisPhDdegreefromtheGraduateSchoolof
ChineseAcademyofSciencesin2004Heiscurrentlyaprofessorof
South China Botanical GardenChinese Academy ofSciencesHis
researchinterestsincludebiochemistryandmolecularbiologyinrelation
to ripeningsenescence and deterioration of postharvestfruits and
vegetablesespeciallytranscriptionalregulationandposttranscriptional
modificationanddevelopmentofstorageandhandlingtechniquesin
subtropicalandtropicalfruitHewasthePrincipalInvestigatorofmore
than20projectsfromthegovernmentUptonowhehaspublishedmorethan90papersandhasbeen
patented29inventionpatentsincludinganUSApatent
bullReviewsbull
66 Vol26No12018 SCIENCEFOUNDATIONINCHINA
[71]PulidoPToledoGOrtizGPhillipsMAetalArabidopsisJGProteinJ20deliversthefirstenzymeoftheplastidialisoprenoidpathwaytoproteinqualitycontrolPlantCell2013254183mdash4194
[72]PrasannaVPrabhaTNTharanathanRNFruitripeningphenomenamdashAnoverviewCriticalReviewsinFoodScienceandNutrition
2007471mdash19[73]FujisawaMShimaYHiguchiNetalDirecttargetsofthetomatoGripeningregulatorRINidentifiedbytranscriptomeandchromatin
immunoprecipitationanalysesPlanta20122351107mdash1122[74]KarlovaRRosinFMBusscherGLangeJetalTranscriptomeandmetaboliteprofilingshowthatAPETALA2aisamajorregulatorof
tomatofruitripeningPlantCell201123923mdash941[75]LeeJMJoungJGMcQuinnRetalCombinedtranscriptomegeneticdiversityandmetaboliteprofilingintomatofruitrevealsthatthe
ethyleneresponsefactorSlERF6playsanimportantroleinripeningandcarotenoidaccumulationPlantJournal201270191mdash204[76]ShimaYFujisawaMKitagawaMetalTomatoFRUITFULLhomologsregulatefruitripeningviaethylenebiosynthesisBioscience
BiotechnologyandBiochemistry201478231mdash237[77]VrebalovJPanILArroyoAJMetalFleshyfruitexpansionandripeningareregulatedbythetomatoSHATTERPROOFgene
TAGL1PlantCell2009213041mdash3062[78]WangSLuGHouZetalMembersofthetomatoFRUITFULL MADSGboxfamilyregulatestyleabscissionandfruitripening
JournalofExperimentalBotany2014653005mdash3014[79]HagenGAuxinsignaltransductionEssaysinBiochemistry2015581mdash12[80]PanLZengWNiuLetalPpYUC11astrongcandidategeneforthestonyhardphenotypeinpeach(PrunuspersicaLBatsch)
participatesinIAAbiosynthesisduringfruitripeningJournalofExperimentalBotany2015667031mdash7044[81]BoettcherCKeyzersRABossPKetalSequestrationofauxinbytheindoleG3GaceticacidGamidosynthetaseGH3G1ingrapeberry(Vitis
viniferaL)andtheproposedroleofauxinconjugationduringripeningJournalofExperimentalBotany2010613615mdash3625[82]SuLDirettoGPurgattoEetalCarotenoidaccumulationduringtomatofruitripeningismodulatedbytheauxinGethylenebalance
BMCPlantBiology201515[83]WengLZhaoFLiRetalThezincfingertranscriptionfactorSlZFP2negativelyregulatesabscisicacidbiosynthesisandfruitripening
intomatoPlantPhysiology2015167931mdash949[84]JiaHFChaiYMLiCLetalAbscisicacidplaysanimportantroleintheregulationofstrawberryfruitripeningPlantPhysiology
2011157188mdash199[85]CreelmanRAMulletJEBiosynthesisandactionofjasmonatesinplantsAnnualReviewofPlantPhysiologyandPlantMolecular
Biology199748355mdash381[86]LiTXuYZhangLetalThejasmonateGactivatedtranscriptionfactorMdMYC2regulatesETHYLENERESPONSEFACTORand
ethylenebiosyntheticgenestopromoteethylenebiosynthesisduringapplefruitripeningPlantCell2017291316mdash1334[87]RudellDRMattheisJPFanXetalMethyljasmonateenhancesanthocyaninaccumulationandmodifiesproductionofphenolicsand
pigmentsinlsquoFujirsquoapplesJournaloftheAmericanSocietyforHorticulturalScience2002127435mdash441[88]LiuLWeiJZhang MetalEthyleneindependentinductionoflycopenebiosynthesisintomatofruitsbyjasmonatesJournalof
ExperimentalBotany2012635751mdash5761
DuanXuewu
ProfDuanXuewureceivedhisPhDdegreefromtheGraduateSchoolof
ChineseAcademyofSciencesin2004Heiscurrentlyaprofessorof
South China Botanical GardenChinese Academy ofSciencesHis
researchinterestsincludebiochemistryandmolecularbiologyinrelation
to ripeningsenescence and deterioration of postharvestfruits and
vegetablesespeciallytranscriptionalregulationandposttranscriptional
modificationanddevelopmentofstorageandhandlingtechniquesin
subtropicalandtropicalfruitHewasthePrincipalInvestigatorofmore
than20projectsfromthegovernmentUptonowhehaspublishedmorethan90papersandhasbeen
patented29inventionpatentsincludinganUSApatent